Conservation of cofitness between PP_0422 and PP_0967 in Pseudomonas putida KT2440

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0422 Indole-3-glycerol phosphate synthase 1.0 PP_0967 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) 0.89 14
Pseudomonas fluorescens FW300-N2E2 0.88 Pf6N2E2_4826 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.83 Pf6N2E2_3251 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) 0.65 45
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_2549 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.85 Pf1N1B4_1065 Histidinol-phosphate aminotransferase (EC 2.6.1.9) low > 87
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_1222 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.83 PfGW456L13_4999 Histidinol-phosphate aminotransferase (EC 2.6.1.9) low > 87
Pseudomonas fluorescens FW300-N2C3 0.87 AO356_14440 indole-3-glycerol-phosphate synthase 0.82 AO356_06960 histidinol-phosphate aminotransferase 0.60 62
Pseudomonas sp. RS175 0.87 PFR28_04043 Indole-3-glycerol phosphate synthase 0.82 PFR28_00188 Histidinol-phosphate aminotransferase — —
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_07210 indole-3-glycerol-phosphate synthase 0.83 AO353_05105 histidinol-phosphate aminotransferase 0.60 67
Pseudomonas simiae WCS417 0.86 PS417_25710 indole-3-glycerol-phosphate synthase 0.84 PS417_04425 histidinol-phosphate aminotransferase low > 88
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.85 PFLU_RS04475 histidinol-phosphate transaminase low > 109
Pseudomonas fluorescens SBW25 0.84 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.85 PFLU_RS04475 histidinol-phosphate transaminase low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.82 Psyr_4579 indole-3-glycerol phosphate synthase 0.83 Psyr_4132 histidinol phosphate aminotransferase apoenzyme low > 86
Pseudomonas syringae pv. syringae B728a 0.82 Psyr_4579 indole-3-glycerol phosphate synthase 0.83 Psyr_4132 histidinol phosphate aminotransferase apoenzyme 0.31 64
Pseudomonas sp. S08-1 0.81 OH686_15140 Indole-3-glycerol phosphate synthase 0.84 OH686_08465 histidinol-phosphate transaminase 0.83 14
Pseudomonas stutzeri RCH2 0.77 Psest_3647 Indole-3-glycerol phosphate synthase 0.83 Psest_3297 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) 0.68 30
Marinobacter adhaerens HP15 0.62 HP15_3291 indole-3-glycerol phosphate synthase 0.71 HP15_2427 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) 0.74 18
Xanthomonas campestris pv. campestris strain 8004 0.58 Xcc-8004.622.1 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.19 Xcc-8004.2947.1 Histidinol-phosphate aminotransferase (EC 2.6.1.9) 0.88 15
Lysobacter sp. OAE881 0.53 ABIE51_RS04190 indole-3-glycerol phosphate synthase TrpC 0.21 ABIE51_RS12140 histidinol-phosphate transaminase 0.75 13
Paraburkholderia sabiae LMG 24235 0.53 QEN71_RS27565 indole-3-glycerol phosphate synthase TrpC 0.58 QEN71_RS01680 histidinol-phosphate transaminase low > 153
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_12280 trpC indole-3-glycerol phosphate synthase TrpC 0.18 OKGIIK_04955 hisC histidinol-phosphate transaminase low > 52
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS18310 indole-3-glycerol-phosphate synthase 0.21 RR42_RS04465 aspartate aminotransferase low > 128
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS17405 indole-3-glycerol phosphate synthase 0.60 BPHYT_RS02830 aspartate aminotransferase low > 109
Castellaniella sp019104865 MT123 0.51 ABCV34_RS10310 indole-3-glycerol phosphate synthase TrpC 0.57 ABCV34_RS02645 histidinol-phosphate transaminase — —
Dechlorosoma suillum PS 0.51 Dsui_0168 Indole-3-glycerol phosphate synthase 0.68 Dsui_1414 histidinol-phosphate aminotransferase — —
Variovorax sp. OAS795 0.50 ABID97_RS05280 indole-3-glycerol phosphate synthase TrpC 0.56 ABID97_RS08770 histidinol-phosphate transaminase low > 91
Paraburkholderia graminis OAS925 0.50 ABIE53_003643 indole-3-glycerol phosphate synthase 0.60 ABIE53_000704 histidinol-phosphate aminotransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.50 GFF3111 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.17 GFF1493 Histidinol-phosphate aminotransferase (EC 2.6.1.9) low > 90
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_05712 indole-3-glycerol phosphate synthase 0.59 H281DRAFT_01942 histidinol-phosphate aminotransferase low > 103
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS12065 indole-3-glycerol phosphate synthase TrpC 0.18 ABZR86_RS06725 histidinol-phosphate transaminase 0.94 15
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS06505 indole-3-glycerol phosphate synthase TrpC 0.20 RALBFv3_RS13765 histidinol-phosphate transaminase — —
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS02160 indole-3-glycerol phosphate synthase TrpC 0.61 ABZR87_RS03260 histidinol-phosphate transaminase low > 80
Ralstonia solanacearum UW163 0.49 UW163_RS07120 indole-3-glycerol phosphate synthase TrpC 0.20 UW163_RS16045 histidinol-phosphate transaminase — —
Ralstonia solanacearum GMI1000 0.49 RS_RS14450 Indole-3-glycerol phosphate synthase 1 0.21 RS_RS04500 histidinol-phosphate aminotransferase — —
Acidovorax sp. GW101-3H11 0.49 Ac3H11_772 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.13 Ac3H11_4729 histidinol-phosphate transaminase (EC 2.6.1.9) (from data) — —
Ralstonia solanacearum PSI07 0.49 RPSI07_RS10735 indole-3-glycerol phosphate synthase TrpC 0.21 RPSI07_RS19705 histidinol-phosphate transaminase — —
Acinetobacter radioresistens SK82 0.49 MPMX26_00983 Indole-3-glycerol phosphate synthase 0.61 MPMX26_02586 Histidinol-phosphate aminotransferase 0.95 13
Variovorax sp. SCN45 0.48 GFF5890 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.57 GFF3955 Histidinol-phosphate aminotransferase (EC 2.6.1.9) — —
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS11570 indole-3-glycerol phosphate synthase TrpC 0.19 LRK54_RS01600 histidinol-phosphate transaminase 0.49 30
Rhodanobacter denitrificans MT42 0.47 LRK55_RS11300 indole-3-glycerol phosphate synthase TrpC 0.18 LRK55_RS01380 histidinol-phosphate transaminase low > 63
Rhizobium sp. OAE497 0.45 ABIE40_RS09550 indole-3-glycerol phosphate synthase TrpC 0.21 ABIE40_RS17595 histidinol-phosphate transaminase — —
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS19450 indole-3-glycerol-phosphate synthase 0.64 HSERO_RS23520 histidinol-phosphate aminotransferase low > 78
Phaeobacter inhibens DSM 17395 0.45 PGA1_c16910 indole-3-glycerol phosphate synthase TrpC 0.21 PGA1_c25240 histidinol-phosphate aminotransferase [EC:2.6.1.9] (from data) — —
Rhodospirillum rubrum S1H 0.45 Rru_A1897 Indole-3-glycerol-phosphate synthase (NCBI) 0.19 Rru_A3264 Histidinol-phosphate aminotransferase (NCBI) 0.87 20
Azospirillum sp. SherDot2 0.44 MPMX19_01014 Indole-3-glycerol phosphate synthase 0.19 MPMX19_04389 Histidinol-phosphate aminotransferase — —
Sphingomonas koreensis DSMZ 15582 0.44 Ga0059261_0930 indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.19 Ga0059261_2299 histidinol-phosphate aminotransferase 0.96 9
Magnetospirillum magneticum AMB-1 0.44 AMB_RS14415 indole-3-glycerol phosphate synthase TrpC 0.23 AMB_RS20110 histidinol-phosphate aminotransferase — —
Dinoroseobacter shibae DFL-12 0.44 Dshi_1800 Indole-3-glycerol-phosphate synthase (RefSeq) 0.18 Dshi_2946 histidinol-phosphate aminotransferase (RefSeq) — —
Rhodopseudomonas palustris CGA009 0.44 TX73_014985 indole-3-glycerol phosphate synthase TrpC 0.21 TX73_023035 histidinol-phosphate transaminase — —
Azospirillum brasilense Sp245 0.42 AZOBR_RS07450 indole-3-glycerol-phosphate synthase 0.21 AZOBR_RS20485 histidinol-phosphate aminotransferase [EC:2.6.1.9] (from data) 0.90 7
Brevundimonas sp. GW460-12-10-14-LB2 0.42 A4249_RS06175 indole-3-glycerol phosphate synthase TrpC 0.20 A4249_RS11450 histidinol-phosphate transaminase — —
Caulobacter crescentus NA1000 Δfur 0.42 CCNA_01976 Indole-3-glycerol phosphate synthase 0.20 CCNA_02306 histidinol-phosphate aminotransferase low > 67
Caulobacter crescentus NA1000 0.42 CCNA_01976 Indole-3-glycerol phosphate synthase 0.20 CCNA_02306 histidinol-phosphate aminotransferase 0.86 40
Agrobacterium fabrum C58 0.41 Atu1688 indole-3-glycerol-phosphate synthase 0.20 Atu3612 histidinol-phosphate aminotransferase — —
Sinorhizobium meliloti 1021 0.40 SMc00236 Indole-3-glycerol phosphate synthase 0.59 SMc03885 histidinol-phosphate aminotransferase low > 103
Pedobacter sp. GW460-11-11-14-LB5 0.36 CA265_RS22900 indole-3-glycerol phosphate synthase 0.19 CA265_RS03630 histidinol-phosphate transaminase 0.38 82
Echinicola vietnamensis KMM 6221, DSM 17526 0.34 Echvi_2508 Indole-3-glycerol phosphate synthase 0.19 Echvi_2458 histidinol-phosphate aminotransferase — —
Synechococcus elongatus PCC 7942 0.33 Synpcc7942_1197 trpC indole-3-glycerol-phosphate synthase 0.17 Synpcc7942_1030 hisC histidinol-phosphate aminotransferase — —
Bacteroides ovatus ATCC 8483 0.33 BACOVA_03783 indole-3-glycerol phosphate synthase 0.17 BACOVA_01233 histidinol-phosphate transaminase 0.95 7
Mucilaginibacter yixingensis YX-36 DSM 26809 0.33 ABZR88_RS16605 indole-3-glycerol phosphate synthase TrpC 0.21 ABZR88_RS06875 histidinol-phosphate transaminase — —
Bacteroides thetaiotaomicron VPI-5482 0.32 BT0529 indole-3-glycerol phosphate synthase (NCBI ptt file) 0.17 BT0202 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) 0.82 17
Parabacteroides merdae CL09T00C40 0.28 HMPREF1078_RS00130 indole-3-glycerol phosphate synthase TrpC 0.19 HMPREF1078_RS02445 histidinol-phosphate transaminase 0.97 5
Mycobacterium tuberculosis H37Rv 0.28 Rv1611 Probable indole-3-glycerol phosphate synthase TrpC 0.16 Rv3772 Probable histidinol-phosphate aminotransferase HisC2 (imidazole acetol-phosphate transaminase) (imidazolylacetolphosphate aminotransferase) — —
Bacteroides stercoris CC31F 0.27 HMPREF1181_RS15340 indole-3-glycerol phosphate synthase TrpC 0.17 HMPREF1181_RS04855 histidinol-phosphate transaminase 0.80 50
Phocaeicola dorei CL03T12C01 0.24 ABI39_RS21065 indole-3-glycerol phosphate synthase TrpC 0.17 ABI39_RS11840 histidinol-phosphate transaminase 0.75 31
Pontibacter actiniarum KMM 6156, DSM 19842 0.23 CA264_05070 indole-3-glycerol phosphate synthase 0.23 CA264_05035 histidinol-phosphate transaminase low > 74
Desulfovibrio vulgaris Hildenborough JW710 0.20 DVU0468 trpC indole-3-glycerol phosphate synthase (TIGR) 0.22 DVU1029 hisC histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) 0.75 42

Not shown: 1 genomes with orthologs for PP_0422 only; 38 genomes with orthologs for PP_0967 only