Conservation of cofitness between PP_0959 and PP_0958 in Pseudomonas putida KT2440

77 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0959 phospholipid ABC transporter 1.0 PP_0958 phospholipid ABC transporter ATP-binding subunit 0.69 2
Pseudomonas syringae pv. syringae B728a 0.91 Psyr_4140 Protein of unknown function DUF140 0.92 Psyr_4141 ABC transporter 0.39 5
Pseudomonas syringae pv. syringae B728a ΔmexB 0.91 Psyr_4140 Protein of unknown function DUF140 0.92 Psyr_4141 ABC transporter low > 86
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_3259 Uncharacterized ABC transporter, permease component YrbE 0.91 Pf6N2E2_3260 Uncharacterized ABC transporter, ATP-binding protein YrbF
Pseudomonas fluorescens FW300-N2C3 0.90 AO356_07000 ABC transporter permease 0.91 AO356_07005 ABC transporter ATP-binding protein 0.50 4
Pseudomonas sp. RS175 0.89 PFR28_00180 Intermembrane phospholipid transport system permease protein MlaE 0.91 PFR28_00179 Intermembrane phospholipid transport system ATP-binding protein MlaF 0.91 4
Pseudomonas stutzeri RCH2 0.88 Psest_3306 conserved hypothetical integral membrane protein 0.89 Psest_3307 ABC-type transport system involved in resistance to organic solvents, ATPase component 0.94 2
Pseudomonas sp. S08-1 0.85 OH686_08505 Phospholipid ABC transporter permease protein MlaE 0.92 OH686_08510 Phospholipid ABC transporter ATP-binding protein MlaF 0.86 1
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_5007 Uncharacterized ABC transporter, permease component YrbE 0.93 PfGW456L13_5008 Uncharacterized ABC transporter, ATP-binding protein YrbF
Pseudomonas simiae WCS417 0.85 PS417_04380 ABC transporter permease 0.94 PS417_04375 ABC transporter ATP-binding protein 0.36 5
Pseudomonas fluorescens SBW25-INTG 0.85 PFLU_RS04435 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.94 PFLU_RS04430 ATP-binding cassette domain-containing protein 0.89 3
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_05145 ABC transporter permease 0.95 AO353_05150 ABC transporter ATP-binding protein 0.90 4
Pseudomonas fluorescens SBW25 0.85 PFLU_RS04435 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.94 PFLU_RS04430 ATP-binding cassette domain-containing protein 0.95 3
Pseudomonas fluorescens FW300-N1B4 0.84 Pf1N1B4_1073 Uncharacterized ABC transporter, permease component YrbE 0.90 Pf1N1B4_1074 Uncharacterized ABC transporter, ATP-binding protein YrbF
Marinobacter adhaerens HP15 0.72 HP15_2435 ABC-type transport system involved in resistance to organic solvents, permease component 0.64 HP15_2436 toluene tolerance ABC efflux transporter, ATP-binding protein 0.91 1
Pantoea sp. MT58 0.64 IAI47_17140 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.64 IAI47_17145 phospholipid ABC transporter ATP-binding protein MlaF 0.70 1
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_12770 ABC transporter permease 0.61 CSW01_12775 phospholipid ABC transporter ATP-binding protein MlaF 0.78 5
Dickeya dadantii 3937 0.64 DDA3937_RS01570 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.62 DDA3937_RS01565 phospholipid ABC transporter ATP-binding protein MlaF 0.69 2
Pectobacterium carotovorum WPP14 0.63 HER17_RS20020 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.64 HER17_RS20025 phospholipid ABC transporter ATP-binding protein MlaF 0.85 1
Serratia liquefaciens MT49 0.63 IAI46_22425 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.61 IAI46_22430 phospholipid ABC transporter ATP-binding protein MlaF low > 86
Dickeya dianthicola 67-19 0.63 HGI48_RS01485 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.61 HGI48_RS01480 phospholipid ABC transporter ATP-binding protein MlaF low > 71
Dickeya dianthicola ME23 0.63 DZA65_RS01550 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.61 DZA65_RS01545 phospholipid ABC transporter ATP-binding protein MlaF 0.83 4
Rahnella sp. WP5 0.63 EX31_RS12440 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.68 EX31_RS12435 phospholipid ABC transporter ATP-binding protein MlaF low > 89
Erwinia tracheiphila SCR3 0.62 LU632_RS21240 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.59 LU632_RS21245 mlaF phospholipid ABC transporter ATP-binding protein MlaF 0.94 2
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.62 GFF2938 Uncharacterized ABC transporter, permease component YrbE 0.57 GFF2939 Uncharacterized ABC transporter, ATP-binding protein YrbF 0.51 5
Alteromonas macleodii MIT1002 0.61 MIT1002_00835 putative phospholipid ABC transporter permease protein MlaE 0.59 MIT1002_00834 putative ABC transporter ATP-binding protein 0.73 1
Escherichia coli ECRC101 0.61 OKFHMN_17980 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.58 OKFHMN_17975 mlaF phospholipid ABC transporter ATP-binding protein MlaF
Escherichia fergusonii Becca 0.61 EFB2_00629 Intermembrane phospholipid transport system permease protein MlaE 0.58 EFB2_00628 Intermembrane phospholipid transport system ATP-binding protein MlaF 0.71 23
Escherichia coli ECRC98 0.61 JDDGAC_21605 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.58 JDDGAC_21600 mlaF phospholipid ABC transporter ATP-binding protein MlaF
Escherichia coli ECRC62 0.61 BNILDI_01755 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.58 BNILDI_01760 mlaF phospholipid ABC transporter ATP-binding protein MlaF
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_00506 putative phospholipid ABC transporter permease protein MlaE 0.58 OHPLBJKB_00505 putative phospholipid import ATP-binding protein MlaF 0.80 3
Escherichia coli ECOR27 0.61 NOLOHH_09780 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.58 NOLOHH_09775 mlaF phospholipid ABC transporter ATP-binding protein MlaF 0.91 3
Escherichia coli ECRC102 0.61 NIAGMN_15740 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.58 NIAGMN_15735 mlaF phospholipid ABC transporter ATP-binding protein MlaF
Escherichia coli BL21 0.61 ECD_03059 ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein 0.58 ECD_03060 ABC transporter maintaining OM lipid asymmetry, ATP-binding protein 0.78 5
Escherichia coli ECRC99 0.61 KEDOAH_10170 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.58 KEDOAH_10175 mlaF phospholipid ABC transporter ATP-binding protein MlaF
Escherichia coli Nissle 1917 0.61 ECOLIN_RS18385 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.58 ECOLIN_RS18390 phospholipid ABC transporter ATP-binding protein MlaF 0.97 2
Escherichia coli BW25113 0.61 b3194 yrbE predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) 0.58 b3195 yrbF predicted toluene transporter subunit: ATP-binding component of ABC superfamily (NCBI) 0.94 1
Escherichia coli ECOR38 0.61 HEPCGN_16855 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.58 HEPCGN_16850 mlaF phospholipid ABC transporter ATP-binding protein MlaF 0.90 9
Escherichia coli ECRC101 0.61 MCAODC_08500 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.58 MCAODC_08495 mlaF phospholipid ABC transporter ATP-binding protein MlaF
Klebsiella michiganensis M5al 0.61 BWI76_RS25225 ABC transporter permease 0.58 BWI76_RS25230 phospholipid ABC transporter ATP-binding protein MlaF 0.91 1
Shewanella amazonensis SB2B 0.61 Sama_3080 hypothetical protein (RefSeq) 0.64 Sama_3081 ABC transporter, ATP-binding protein, putative (RefSeq) 0.96 1
Enterobacter sp. TBS_079 0.60 MPMX20_04100 Intermembrane phospholipid transport system permease protein MlaE 0.59 MPMX20_04101 Intermembrane phospholipid transport system ATP-binding protein MlaF 0.41 34
Enterobacter asburiae PDN3 0.60 EX28DRAFT_3248 ABC transport permease subunit 0.58 EX28DRAFT_3249 ABC-type transport system involved in resistance to organic solvents, ATPase component 0.53 71
Shewanella loihica PV-4 0.60 Shew_3303 hypothetical protein (RefSeq) 0.60 Shew_3304 ABC transporter-related protein (RefSeq) 0.84 2
Shewanella oneidensis MR-1 0.60 SO3953 conserved hypothetical protein TIGR00056 (NCBI ptt file) 0.62 SO3954 ABC transporter, ATP-binding protein, putative (NCBI ptt file) 0.93 2
Shewanella sp. ANA-3 0.59 Shewana3_0679 hypothetical protein (RefSeq) 0.62 Shewana3_0678 ABC transporter related (RefSeq) 0.74 5
Acinetobacter radioresistens SK82 0.59 MPMX26_02740 Intermembrane phospholipid transport system permease protein MlaE 0.63 MPMX26_02741 Intermembrane phospholipid transport system ATP-binding protein MlaF 1.00 1
Paraburkholderia graminis OAS925 0.53 ABIE53_003711 phospholipid/cholesterol/gamma-HCH transport system permease protein 0.57 ABIE53_003712 phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein 0.96 2
Paraburkholderia bryophila 376MFSha3.1 0.53 H281DRAFT_05642 phospholipid/cholesterol/gamma-HCH transport system permease protein 0.57 H281DRAFT_05641 phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein 0.87 3
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS18965 ABC transporter permease 0.61 RR42_RS18970 toluene ABC transporter ATP-binding protein 0.99 2
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS27915 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.56 QEN71_RS27920 ABC transporter ATP-binding protein 0.88 1
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS02550 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.58 ABZR87_RS02555 ABC transporter ATP-binding protein 0.95 2
Ralstonia solanacearum GMI1000 0.51 RS_RS14840 ABC transporter permease 0.57 RS_RS14845 ABC transporter ATP-binding protein 0.97 2
Ralstonia solanacearum UW163 0.51 UW163_RS06720 ABC transporter permease 0.55 UW163_RS06715 ABC transporter ATP-binding protein
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS06895 ABC transporter permease 0.55 RALBFv3_RS06900 ABC transporter ATP-binding protein
Ralstonia solanacearum PSI07 0.51 RPSI07_RS10340 ABC transporter permease 0.57 RPSI07_RS10335 ABC transporter ATP-binding protein 0.73 3
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS17760 ABC transporter permease 0.56 BPHYT_RS17765 toluene ABC transporter ATP-binding protein 0.88 2
Dechlorosoma suillum PS 0.50 Dsui_1399 conserved hypothetical integral membrane protein 0.59 Dsui_1398 ABC-type transport system involved in resistance to organic solvents, ATPase component 0.96 2
Variovorax sp. SCN45 0.49 GFF5335 Phospholipid ABC transporter permease protein MlaE 0.55 GFF5334 Phospholipid ABC transporter ATP-binding protein MlaF low > 127
Variovorax sp. OAS795 0.49 ABID97_RS23210 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.57 ABID97_RS23215 ABC transporter ATP-binding protein 0.88 1
Acidovorax sp. GW101-3H11 0.48 Ac3H11_4713 Uncharacterized ABC transporter, permease component YrbE 0.58 Ac3H11_4712 Methionine ABC transporter ATP-binding protein 0.94 2
Castellaniella sp019104865 MT123 0.48 ABCV34_RS11185 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.47 ABCV34_RS11180 ABC transporter ATP-binding protein
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS11765 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.53 LRK54_RS11760 ATP-binding cassette domain-containing protein 0.95 2
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS20395 ABC transporter permease 0.56 HSERO_RS20400 toluene ABC transporter ATP-binding protein
Rhodanobacter denitrificans MT42 0.45 LRK55_RS11490 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.53 LRK55_RS11485 ATP-binding cassette domain-containing protein 0.96 4
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS11880 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.58 ABZR86_RS11885 ATP-binding cassette domain-containing protein 0.88 3
Hydrogenophaga sp. GW460-11-11-14-LB1 0.45 GFF1324 Uncharacterized ABC transporter, permease component YrbE 0.59 GFF1325 Methionine ABC transporter ATP-binding protein 0.82 4
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_12130 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.56 OKGIIK_12135 mlaF ABC transporter ATP-binding protein 0.99 4
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.5365.1 Uncharacterized ABC transporter, permease component YrbE 0.47 Xcc-8004.5363.1 Uncharacterized ABC transporter, ATP-binding protein YrbF 0.46 44
Lysobacter sp. OAE881 0.35 ABIE51_RS01010 MlaE family lipid ABC transporter permease subunit 0.47 ABIE51_RS01015 ABC transporter ATP-binding protein 0.94 2
Desulfovibrio vulgaris Miyazaki F 0.35 DvMF_0852 protein of unknown function DUF140 (RefSeq) 0.34 DvMF_0853 ABC transporter related (RefSeq) 0.65 3
Synechococcus elongatus PCC 7942 0.25 Synpcc7942_0378 ycf63 Protein of unknown function DUF140 0.32 Synpcc7942_0350 ATPase 0.94 1
Pontibacter actiniarum KMM 6156, DSM 19842 0.21 CA264_04390 ABC transporter permease 0.27 CA264_04395 ABC transporter ATP-binding protein 0.81 1
Bacteroides stercoris CC31F 0.18 HMPREF1181_RS07475 ABC transporter permease 0.28 HMPREF1181_RS07480 ABC transporter ATP-binding protein 0.95 2
Bacteroides ovatus ATCC 8483 0.18 BACOVA_00331 hypothetical protein 0.29 BACOVA_00332 ABC transporter, ATP-binding protein 0.78 1
Bacteroides thetaiotaomicron VPI-5482 0.17 BT3838 conserved hypothetical protein (NCBI ptt file) 0.29 BT3839 ABC transporter ATP-binding protein (NCBI ptt file)
Phocaeicola dorei CL03T12C01 0.17 ABI39_RS02350 ABC transporter permease 0.27 ABI39_RS02355 ABC transporter ATP-binding protein 0.91 1
Phocaeicola vulgatus CL09T03C04 0.17 HMPREF1058_RS03105 ABC transporter permease 0.27 HMPREF1058_RS03110 ABC transporter ATP-binding protein 0.89 1

Not shown: 11 genomes with orthologs for PP_0959 only; 0 genomes with orthologs for PP_0958 only