Conservation of cofitness between PP_4680 and PP_0422 in Pseudomonas putida KT2440

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4680 acetohydroxybutanoate synthase / acetolactate synthase 1.0 PP_0422 Indole-3-glycerol phosphate synthase 0.92 14
Pseudomonas syringae pv. syringae B728a 0.90 Psyr_0846 acetolactate synthase, large subunit 0.82 Psyr_4579 indole-3-glycerol phosphate synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.90 Psyr_0846 acetolactate synthase, large subunit 0.82 Psyr_4579 indole-3-glycerol phosphate synthase low > 86
Pseudomonas sp. RS175 0.90 PFR28_03699 Acetolactate synthase isozyme 3 large subunit 0.87 PFR28_04043 Indole-3-glycerol phosphate synthase
Pseudomonas fluorescens FW300-N2C3 0.89 AO356_16170 acetolactate synthase 3 catalytic subunit 0.87 AO356_14440 indole-3-glycerol-phosphate synthase 0.93 21
Pseudomonas simiae WCS417 0.89 PS417_23810 acetolactate synthase 3 catalytic subunit 0.86 PS417_25710 indole-3-glycerol-phosphate synthase 0.82 26
Pseudomonas fluorescens FW300-N2E3 0.89 AO353_14495 acetolactate synthase 3 catalytic subunit 0.86 AO353_07210 indole-3-glycerol-phosphate synthase 0.84 21
Pseudomonas fluorescens FW300-N2E2 0.89 Pf6N2E2_5175 Acetolactate synthase large subunit (EC 2.2.1.6) 0.88 Pf6N2E2_4826 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.95 5
Pseudomonas fluorescens SBW25 0.89 PFLU_RS25650 acetolactate synthase 3 large subunit 0.84 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC
Pseudomonas fluorescens SBW25-INTG 0.89 PFLU_RS25650 acetolactate synthase 3 large subunit 0.84 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC
Pseudomonas fluorescens GW456-L13 0.88 PfGW456L13_1538 Acetolactate synthase large subunit (EC 2.2.1.6) 0.87 PfGW456L13_1222 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.86 43
Pseudomonas fluorescens FW300-N1B4 0.88 Pf1N1B4_2878 Acetolactate synthase large subunit (EC 2.2.1.6) 0.87 Pf1N1B4_2549 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.90 7
Pseudomonas stutzeri RCH2 0.88 Psest_1036 acetolactate synthase, large subunit, biosynthetic type 0.77 Psest_3647 Indole-3-glycerol phosphate synthase
Pseudomonas sp. S08-1 0.88 OH686_08130 acetolactate synthase, large subunit, biosynthetic type 0.81 OH686_15140 Indole-3-glycerol phosphate synthase 0.77 23
Marinobacter adhaerens HP15 0.75 HP15_531 acetolactate synthase, large subunit, biosynthetic type 0.62 HP15_3291 indole-3-glycerol phosphate synthase 0.72 40
Acinetobacter radioresistens SK82 0.70 MPMX26_00472 Acetolactate synthase isozyme 3 large subunit 0.49 MPMX26_00983 Indole-3-glycerol phosphate synthase 0.93 16
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS14955 acetolactate synthase 3 catalytic subunit 0.49 ABZR87_RS02160 indole-3-glycerol phosphate synthase TrpC low > 80
Ralstonia solanacearum PSI07 0.62 RPSI07_RS14255 acetolactate synthase, large subunit, biosynthetic type 0.49 RPSI07_RS10735 indole-3-glycerol phosphate synthase TrpC
Ralstonia solanacearum UW163 0.62 UW163_RS10675 acetolactate synthase 3 large subunit 0.49 UW163_RS07120 indole-3-glycerol phosphate synthase TrpC
Ralstonia solanacearum IBSBF1503 0.62 RALBFv3_RS03050 acetolactate synthase 3 large subunit 0.49 RALBFv3_RS06505 indole-3-glycerol phosphate synthase TrpC
Ralstonia solanacearum GMI1000 0.62 RS_RS10420 acetolactate synthase 3 large subunit 0.49 RS_RS14450 Indole-3-glycerol phosphate synthase 1
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS05435 acetolactate synthase 3 catalytic subunit 0.51 RR42_RS18310 indole-3-glycerol-phosphate synthase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF4276 Acetolactate synthase large subunit (EC 2.2.1.6) 0.50 GFF3111 Indole-3-glycerol phosphate synthase (EC 4.1.1.48)
Paraburkholderia bryophila 376MFSha3.1 0.61 H281DRAFT_04551 acetolactate synthase, large subunit 0.50 H281DRAFT_05712 indole-3-glycerol phosphate synthase
Burkholderia phytofirmans PsJN 0.60 BPHYT_RS06545 acetolactate synthase 0.51 BPHYT_RS17405 indole-3-glycerol phosphate synthase 0.86 36
Dechlorosoma suillum PS 0.60 Dsui_3529 acetolactate synthase, large subunit, biosynthetic type 0.51 Dsui_0168 Indole-3-glycerol phosphate synthase
Paraburkholderia graminis OAS925 0.59 ABIE53_001574 acetolactate synthase-1/2/3 large subunit 0.50 ABIE53_003643 indole-3-glycerol phosphate synthase
Herbaspirillum seropedicae SmR1 0.59 HSERO_RS08650 acetolactate synthase 0.45 HSERO_RS19450 indole-3-glycerol-phosphate synthase 0.88 23
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS24225 acetolactate synthase 3 catalytic subunit 0.53 QEN71_RS27565 indole-3-glycerol phosphate synthase TrpC 0.89 35
Variovorax sp. SCN45 0.59 GFF1158 Acetolactate synthase large subunit (EC 2.2.1.6) 0.48 GFF5890 Indole-3-glycerol phosphate synthase (EC 4.1.1.48)
Acidovorax sp. GW101-3H11 0.59 Ac3H11_525 Acetolactate synthase large subunit (EC 2.2.1.6) 0.49 Ac3H11_772 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.80 23
Variovorax sp. OAS795 0.59 ABID97_RS14885 acetolactate synthase 3 catalytic subunit 0.50 ABID97_RS05280 indole-3-glycerol phosphate synthase TrpC
Castellaniella sp019104865 MT123 0.59 ABCV34_RS01210 acetolactate synthase 3 catalytic subunit 0.51 ABCV34_RS10310 indole-3-glycerol phosphate synthase TrpC
Caulobacter crescentus NA1000 0.52 CCNA_02185 acetolactate synthase large subunit 0.42 CCNA_01976 Indole-3-glycerol phosphate synthase 0.85 51
Caulobacter crescentus NA1000 Δfur 0.52 CCNA_02185 acetolactate synthase large subunit 0.42 CCNA_01976 Indole-3-glycerol phosphate synthase low > 67
Bosea sp. OAE506 0.51 ABIE41_RS12890 acetolactate synthase 3 large subunit 0.41 ABIE41_RS17425 indole-3-glycerol phosphate synthase TrpC
Azospirillum sp. SherDot2 0.51 MPMX19_01776 Acetolactate synthase isozyme 3 large subunit 0.44 MPMX19_01014 Indole-3-glycerol phosphate synthase
Azospirillum brasilense Sp245 0.50 AZOBR_RS06560 acetolactate synthase 0.42 AZOBR_RS07450 indole-3-glycerol-phosphate synthase low > 97
Desulfovibrio vulgaris Hildenborough JW710 0.50 DVU1376 ilvB-2 acetolactate synthase, large subunit, biosynthetic type (TIGR) 0.20 DVU0468 trpC indole-3-glycerol phosphate synthase (TIGR) 0.77 39
Rhodospirillum rubrum S1H 0.49 Rru_A0467 Acetolactate synthase, large subunit, biosynthetic type (NCBI) 0.45 Rru_A1897 Indole-3-glycerol-phosphate synthase (NCBI) 0.93 12
Rhizobium sp. OAE497 0.49 ABIE40_RS11495 acetolactate synthase 3 large subunit 0.45 ABIE40_RS09550 indole-3-glycerol phosphate synthase TrpC
Agrobacterium fabrum C58 0.49 Atu2036 acetolactate synthase III, large subunit 0.41 Atu1688 indole-3-glycerol-phosphate synthase 0.81 31
Sinorhizobium meliloti 1021 0.49 SMc01431 acetolactate synthase 3 catalytic subunit 0.40 SMc00236 Indole-3-glycerol phosphate synthase 0.78 74
Dinoroseobacter shibae DFL-12 0.49 Dshi_1779 acetolactate synthase, large subunit, biosynthetic type (RefSeq) 0.44 Dshi_1800 Indole-3-glycerol-phosphate synthase (RefSeq)
Magnetospirillum magneticum AMB-1 0.48 AMB_RS17740 acetolactate synthase 3 large subunit 0.44 AMB_RS14415 indole-3-glycerol phosphate synthase TrpC
Rhodopseudomonas palustris CGA009 0.48 TX73_010465 acetolactate synthase 3 large subunit 0.44 TX73_014985 indole-3-glycerol phosphate synthase TrpC
Sphingomonas koreensis DSMZ 15582 0.48 Ga0059261_0068 acetolactate synthase, large subunit (EC 2.2.1.6) 0.44 Ga0059261_0930 indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.96 37
Phaeobacter inhibens DSM 17395 0.46 PGA1_c20210 acetolactate synthase isozyme 3 large subunit 0.45 PGA1_c16910 indole-3-glycerol phosphate synthase TrpC
Synechococcus elongatus PCC 7942 0.45 Synpcc7942_0139 ilvB acetolactate synthase 3 catalytic subunit 0.33 Synpcc7942_1197 trpC indole-3-glycerol-phosphate synthase
Mycobacterium tuberculosis H37Rv 0.44 Rv3003c Acetolactate synthase (large subunit) IlvB1 (acetohydroxy-acid synthase) 0.28 Rv1611 Probable indole-3-glycerol phosphate synthase TrpC
Bacteroides stercoris CC31F 0.37 HMPREF1181_RS08330 biosynthetic-type acetolactate synthase large subunit 0.27 HMPREF1181_RS15340 indole-3-glycerol phosphate synthase TrpC 0.87 16
Pedobacter sp. GW460-11-11-14-LB5 0.37 CA265_RS15805 acetolactate synthase, large subunit, biosynthetic type 0.36 CA265_RS22900 indole-3-glycerol phosphate synthase low > 88
Parabacteroides merdae CL09T00C40 0.37 HMPREF1078_RS16690 biosynthetic-type acetolactate synthase large subunit 0.28 HMPREF1078_RS00130 indole-3-glycerol phosphate synthase TrpC low > 61
Pontibacter actiniarum KMM 6156, DSM 19842 0.37 CA264_06930 acetolactate synthase, large subunit, biosynthetic type 0.23 CA264_05070 indole-3-glycerol phosphate synthase low > 74
Lysobacter sp. OAE881 0.37 ABIE51_RS17550 acetolactate synthase 2 catalytic subunit 0.53 ABIE51_RS04190 indole-3-glycerol phosphate synthase TrpC low > 62
Bacteroides thetaiotaomicron VPI-5482 0.37 BT2077 acetolactate synthase large subunit (NCBI ptt file) 0.32 BT0529 indole-3-glycerol phosphate synthase (NCBI ptt file) 0.85 40
Echinicola vietnamensis KMM 6221, DSM 17526 0.36 Echvi_2056 acetolactate synthase, large subunit, biosynthetic type 0.34 Echvi_2508 Indole-3-glycerol phosphate synthase
Bacteroides ovatus ATCC 8483 0.36 BACOVA_03303 acetolactate synthase, large subunit, biosynthetic type 0.33 BACOVA_03783 indole-3-glycerol phosphate synthase 0.93 39
Mucilaginibacter yixingensis YX-36 DSM 26809 0.36 ABZR88_RS11580 biosynthetic-type acetolactate synthase large subunit 0.33 ABZR88_RS16605 indole-3-glycerol phosphate synthase TrpC
Phocaeicola dorei CL03T12C01 0.36 ABI39_RS12720 biosynthetic-type acetolactate synthase large subunit 0.24 ABI39_RS21065 indole-3-glycerol phosphate synthase TrpC 0.81 35
Brevundimonas sp. GW460-12-10-14-LB2 0.35 A4249_RS10020 acetolactate synthase 2 catalytic subunit 0.42 A4249_RS06175 indole-3-glycerol phosphate synthase TrpC
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.1059.1 Acetolactate synthase large subunit (EC 2.2.1.6) 0.58 Xcc-8004.622.1 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.83 23
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS15935 biosynthetic-type acetolactate synthase large subunit 0.50 ABZR86_RS12065 indole-3-glycerol phosphate synthase TrpC 0.94 46
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS10310 biosynthetic-type acetolactate synthase large subunit 0.48 LRK54_RS11570 indole-3-glycerol phosphate synthase TrpC low > 59
Rhodanobacter denitrificans MT42 0.32 LRK55_RS09950 biosynthetic-type acetolactate synthase large subunit 0.47 LRK55_RS11300 indole-3-glycerol phosphate synthase TrpC low > 63
Rhodanobacter sp. FW510-T8 0.31 OKGIIK_13610 ilvB biosynthetic-type acetolactate synthase large subunit 0.52 OKGIIK_12280 trpC indole-3-glycerol phosphate synthase TrpC low > 52

Not shown: 36 genomes with orthologs for PP_4680 only; 0 genomes with orthologs for PP_0422 only