Conservation of cofitness between PP_0422 and PP_0421 in Pseudomonas putida KT2440

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0422 Indole-3-glycerol phosphate synthase 1.0 PP_0421 Anthranilate phosphoribosyltransferase 0.94 2
Pseudomonas fluorescens FW300-N2E2 0.88 Pf6N2E2_4826 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.87 Pf6N2E2_4825 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.97 2
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_2549 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.87 Pf1N1B4_2548 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.93 7
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_1222 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.85 PfGW456L13_1221 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.98 3
Pseudomonas fluorescens FW300-N2C3 0.87 AO356_14440 indole-3-glycerol-phosphate synthase 0.87 AO356_14435 anthranilate phosphoribosyltransferase 0.96 1
Pseudomonas sp. RS175 0.87 PFR28_04043 Indole-3-glycerol phosphate synthase 0.87 PFR28_04044 Anthranilate phosphoribosyltransferase — —
Pseudomonas simiae WCS417 0.86 PS417_25710 indole-3-glycerol-phosphate synthase 0.87 PS417_25715 anthranilate phosphoribosyltransferase 0.86 4
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_07210 indole-3-glycerol-phosphate synthase 0.88 AO353_07215 anthranilate phosphoribosyltransferase 0.96 3
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.87 PFLU_RS27370 anthranilate phosphoribosyltransferase 0.94 1
Pseudomonas fluorescens SBW25 0.84 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.87 PFLU_RS27370 anthranilate phosphoribosyltransferase 0.83 1
Pseudomonas syringae pv. syringae B728a ΔmexB 0.82 Psyr_4579 indole-3-glycerol phosphate synthase 0.90 Psyr_4580 anthranilate phosphoribosyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.82 Psyr_4579 indole-3-glycerol phosphate synthase 0.90 Psyr_4580 anthranilate phosphoribosyltransferase low > 86
Pseudomonas sp. S08-1 0.81 OH686_15140 Indole-3-glycerol phosphate synthase 0.75 OH686_15135 Anthranilate phosphoribosyltransferase 0.81 21
Pseudomonas stutzeri RCH2 0.77 Psest_3647 Indole-3-glycerol phosphate synthase 0.77 Psest_3648 anthranilate phosphoribosyltransferase 0.95 1
Marinobacter adhaerens HP15 0.62 HP15_3291 indole-3-glycerol phosphate synthase 0.58 HP15_3290 anthranilate phosphoribosyltransferase 0.89 2
Xanthomonas campestris pv. campestris strain 8004 0.58 Xcc-8004.622.1 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.38 Xcc-8004.621.1 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.94 4
Lysobacter sp. OAE881 0.53 ABIE51_RS04190 indole-3-glycerol phosphate synthase TrpC 0.39 ABIE51_RS04180 anthranilate phosphoribosyltransferase 0.89 4
Paraburkholderia sabiae LMG 24235 0.53 QEN71_RS27565 indole-3-glycerol phosphate synthase TrpC 0.44 QEN71_RS27560 anthranilate phosphoribosyltransferase 0.97 3
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_12280 trpC indole-3-glycerol phosphate synthase TrpC 0.40 OKGIIK_12285 trpD anthranilate phosphoribosyltransferase low > 52
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS18310 indole-3-glycerol-phosphate synthase 0.45 RR42_RS18305 anthranilate phosphoribosyltransferase 0.39 1
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS17405 indole-3-glycerol phosphate synthase 0.44 BPHYT_RS17400 anthranilate phosphoribosyltransferase 0.86 4
Castellaniella sp019104865 MT123 0.51 ABCV34_RS10310 indole-3-glycerol phosphate synthase TrpC 0.40 ABCV34_RS10305 anthranilate phosphoribosyltransferase — —
Dechlorosoma suillum PS 0.51 Dsui_0168 Indole-3-glycerol phosphate synthase 0.44 Dsui_0169 anthranilate phosphoribosyltransferase — —
Variovorax sp. OAS795 0.50 ABID97_RS05280 indole-3-glycerol phosphate synthase TrpC 0.44 ABID97_RS05275 anthranilate phosphoribosyltransferase 0.62 6
Hydrogenophaga sp. GW460-11-11-14-LB1 0.50 GFF3111 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.45 GFF3110 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.94 2
Paraburkholderia graminis OAS925 0.50 ABIE53_003643 indole-3-glycerol phosphate synthase 0.44 ABIE53_003642 anthranilate phosphoribosyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_05712 indole-3-glycerol phosphate synthase 0.45 H281DRAFT_05713 anthranilate phosphoribosyltransferase 0.77 6
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS12065 indole-3-glycerol phosphate synthase TrpC 0.43 ABZR86_RS12070 anthranilate phosphoribosyltransferase 0.96 4
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS02160 indole-3-glycerol phosphate synthase TrpC 0.42 ABZR87_RS02155 anthranilate phosphoribosyltransferase 0.86 11
Ralstonia solanacearum UW163 0.49 UW163_RS07120 indole-3-glycerol phosphate synthase TrpC 0.42 UW163_RS07125 anthranilate phosphoribosyltransferase — —
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS06505 indole-3-glycerol phosphate synthase TrpC 0.42 RALBFv3_RS06500 anthranilate phosphoribosyltransferase — —
Ralstonia solanacearum GMI1000 0.49 RS_RS14450 Indole-3-glycerol phosphate synthase 1 0.42 RS_RS14445 Anthranilate phosphoribosyltransferase 1 — —
Acidovorax sp. GW101-3H11 0.49 Ac3H11_772 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.43 Ac3H11_771 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.98 2
Ralstonia solanacearum PSI07 0.49 RPSI07_RS10735 indole-3-glycerol phosphate synthase TrpC 0.42 RPSI07_RS10740 anthranilate phosphoribosyltransferase — —
Acinetobacter radioresistens SK82 0.49 MPMX26_00983 Indole-3-glycerol phosphate synthase 0.60 MPMX26_00984 Anthranilate phosphoribosyltransferase 0.99 2
Variovorax sp. SCN45 0.48 GFF5890 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.43 GFF5891 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) — —
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS11570 indole-3-glycerol phosphate synthase TrpC 0.41 LRK54_RS11565 anthranilate phosphoribosyltransferase 0.76 3
Rhodanobacter denitrificans MT42 0.47 LRK55_RS11300 indole-3-glycerol phosphate synthase TrpC 0.41 LRK55_RS11295 anthranilate phosphoribosyltransferase low > 63
Rhizobium sp. OAE497 0.45 ABIE40_RS09550 indole-3-glycerol phosphate synthase TrpC 0.39 ABIE40_RS09545 anthranilate phosphoribosyltransferase — —
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS19450 indole-3-glycerol-phosphate synthase 0.37 HSERO_RS19445 anthranilate phosphoribosyltransferase 0.94 1
Rhodospirillum rubrum S1H 0.45 Rru_A1897 Indole-3-glycerol-phosphate synthase (NCBI) 0.36 Rru_A1896 Anthranilate phosphoribosyl transferase (NCBI) 0.93 10
Phaeobacter inhibens DSM 17395 0.45 PGA1_c16910 indole-3-glycerol phosphate synthase TrpC 0.31 PGA1_c16890 anthranilate phosphoribosyltransferase TrpD — —
Azospirillum sp. SherDot2 0.44 MPMX19_01014 Indole-3-glycerol phosphate synthase 0.35 MPMX19_01015 Anthranilate phosphoribosyltransferase 0.68 35
Magnetospirillum magneticum AMB-1 0.44 AMB_RS14415 indole-3-glycerol phosphate synthase TrpC 0.36 AMB_RS14410 anthranilate phosphoribosyltransferase — —
Sphingomonas koreensis DSMZ 15582 0.44 Ga0059261_0930 indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.22 Ga0059261_0929 anthranilate phosphoribosyltransferase 0.97 4
Dinoroseobacter shibae DFL-12 0.44 Dshi_1800 Indole-3-glycerol-phosphate synthase (RefSeq) 0.31 Dshi_1799 anthranilate phosphoribosyltransferase (RefSeq) — —
Rhodopseudomonas palustris CGA009 0.44 TX73_014985 indole-3-glycerol phosphate synthase TrpC 0.41 TX73_014980 anthranilate phosphoribosyltransferase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.42 A4249_RS06175 indole-3-glycerol phosphate synthase TrpC 0.29 A4249_RS06170 anthranilate phosphoribosyltransferase — —
Azospirillum brasilense Sp245 0.42 AZOBR_RS07450 indole-3-glycerol-phosphate synthase 0.36 AZOBR_RS07455 anthranilate phosphoribosyltransferase 0.75 30
Caulobacter crescentus NA1000 Δfur 0.42 CCNA_01976 Indole-3-glycerol phosphate synthase 0.29 CCNA_01975 anthranilate phosphoribosyltransferase low > 67
Caulobacter crescentus NA1000 0.42 CCNA_01976 Indole-3-glycerol phosphate synthase 0.29 CCNA_01975 anthranilate phosphoribosyltransferase 0.99 1
Agrobacterium fabrum C58 0.41 Atu1688 indole-3-glycerol-phosphate synthase 0.37 Atu1687 anthranilate phosphoribosyltransferase 0.96 1
Bosea sp. OAE506 0.41 ABIE41_RS17425 indole-3-glycerol phosphate synthase TrpC 0.36 ABIE41_RS17420 anthranilate phosphoribosyltransferase — —
Sinorhizobium meliloti 1021 0.40 SMc00236 Indole-3-glycerol phosphate synthase 0.39 SMc00235 anthranilate phosphoribosyltransferase 0.96 1
Pedobacter sp. GW460-11-11-14-LB5 0.36 CA265_RS22900 indole-3-glycerol phosphate synthase 0.23 CA265_RS05010 anthranilate phosphoribosyltransferase (EC 2.4.2.18) (from data) 0.66 1
Echinicola vietnamensis KMM 6221, DSM 17526 0.34 Echvi_2508 Indole-3-glycerol phosphate synthase 0.25 Echvi_2507 anthranilate phosphoribosyltransferase — —
Synechococcus elongatus PCC 7942 0.33 Synpcc7942_1197 trpC indole-3-glycerol-phosphate synthase 0.26 Synpcc7942_2123 trpD anthranilate phosphoribosyltransferase — —
Bacteroides ovatus ATCC 8483 0.33 BACOVA_03783 indole-3-glycerol phosphate synthase 0.23 BACOVA_03782 anthranilate phosphoribosyltransferase 0.96 5
Bacteroides thetaiotaomicron VPI-5482 0.32 BT0529 indole-3-glycerol phosphate synthase (NCBI ptt file) 0.23 BT0530 anthranilate phosphoribosyltransferase (EC 2.4.2.18) (from data) 0.83 12
Parabacteroides merdae CL09T00C40 0.28 HMPREF1078_RS00130 indole-3-glycerol phosphate synthase TrpC 0.23 HMPREF1078_RS00135 anthranilate phosphoribosyltransferase 0.97 6
Mycobacterium tuberculosis H37Rv 0.28 Rv1611 Probable indole-3-glycerol phosphate synthase TrpC 0.24 Rv2192c Probable anthranilate phosphoribosyltransferase TrpD — —
Bacteroides stercoris CC31F 0.27 HMPREF1181_RS15340 indole-3-glycerol phosphate synthase TrpC 0.24 HMPREF1181_RS15335 anthranilate phosphoribosyltransferase 0.96 2
Phocaeicola dorei CL03T12C01 0.24 ABI39_RS21065 indole-3-glycerol phosphate synthase TrpC 0.24 ABI39_RS21060 anthranilate phosphoribosyltransferase 0.88 1
Pontibacter actiniarum KMM 6156, DSM 19842 0.23 CA264_05070 indole-3-glycerol phosphate synthase 0.24 CA264_05065 anthranilate phosphoribosyltransferase low > 74
Desulfovibrio vulgaris Hildenborough JW710 0.20 DVU0468 trpC indole-3-glycerol phosphate synthase (TIGR) 0.26 DVU0467 trpD anthranilate phosphoribosyltransferase (TIGR) 0.99 1

Not shown: 1 genomes with orthologs for PP_0422 only; 18 genomes with orthologs for PP_0421 only