| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_4724 | | Carbamoyl-phosphate synthase small chain | 1.0 | PP_0339 | | Pyruvate dehydrogenase E1 component | 0.53 | 15 |
| Pseudomonas fluorescens FW300-N2E3 | 0.94 | AO353_05635 | | carbamoyl phosphate synthase small subunit | 0.95 | AO353_12865 | | pyruvate dehydrogenase | — | — |
| Pseudomonas simiae WCS417 | 0.93 | PS417_24045 | | carbamoyl phosphate synthase small subunit | 0.95 | PS417_02220 | | pyruvate dehydrogenase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.93 | Pf1N1B4_1173 | | Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) | 0.95 | Pf1N1B4_1476 | | Pyruvate dehydrogenase E1 component (EC 1.2.4.1) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.92 | AO356_07485 | | carbamoyl phosphate synthase small subunit | 0.96 | AO356_08960 | | pyruvate dehydrogenase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.92 | Pf6N2E2_3365 | | Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) | 0.96 | Pf6N2E2_3674 | | Pyruvate dehydrogenase E1 component (EC 1.2.4.1) | — | — |
| Pseudomonas sp. RS175 | 0.92 | PFR28_00076 | | Carbamoyl-phosphate synthase small chain | 0.96 | PFR28_05061 | | Pyruvate dehydrogenase E1 component | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.92 | PfGW456L13_5100 | | Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) | 0.95 | PfGW456L13_214 | | Pyruvate dehydrogenase E1 component (EC 1.2.4.1) | — | — |
| Pseudomonas fluorescens SBW25 | 0.92 | PFLU_RS25885 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.95 | PFLU_RS02275 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.92 | PFLU_RS25885 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.95 | PFLU_RS02275 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.91 | Psyr_4192 | | carbamoyl-phosphate synthase small subunit | 0.93 | Psyr_0518 | | 2-oxo-acid dehydrogenase E1 component homodimeric type | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.91 | Psyr_4192 | | carbamoyl-phosphate synthase small subunit | 0.93 | Psyr_0518 | | 2-oxo-acid dehydrogenase E1 component homodimeric type | — | — |
| Pseudomonas sp. S08-1 | 0.88 | OH686_17075 | | Carbamoyl-phosphate synthase small chain | 0.91 | OH686_09710 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | — | — |
| Pseudomonas stutzeri RCH2 | 0.87 | Psest_0967 | | carbamoyl-phosphate synthase, small subunit | 0.83 | Psest_0448 | | pyruvate dehydrogenase E1 component, homodimeric type | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.75 | CSW01_12105 | | carbamoyl-phosphate synthase small subunit | 0.59 | CSW01_12220 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | — | — |
| Marinobacter adhaerens HP15 | 0.75 | HP15_3078 | | carbamoyl-phosphate synthase small chain | 0.67 | HP15_3046 | | pyruvate dehydrogenase subunit E1 | — | — |
| Shewanella amazonensis SB2B | 0.74 | Sama_2504 | | carbamoyl phosphate synthase small subunit (RefSeq) | 0.59 | Sama_0375 | aceE | pyruvate dehydrogenase subunit E1 (RefSeq) | low | > 62 |
| Rahnella sp. WP5 | 0.72 | EX31_RS03835 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.60 | EX31_RS03480 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | low | > 89 |
| Shewanella oneidensis MR-1 | 0.72 | SO1141 | carA | carbamoyl-phosphate synthase, small subunit (NCBI ptt file) | 0.66 | SO0424 | aceE | pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase (NCBI ptt file) | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.72 | HER17_RS02895 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.61 | HER17_RS03290 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | — | — |
| Enterobacter asburiae PDN3 | 0.72 | EX28DRAFT_3637 | | carbamoyl-phosphate synthase, small subunit | 0.60 | EX28DRAFT_3710 | | pyruvate dehydrogenase E1 component, homodimeric type | — | — |
| Klebsiella michiganensis M5al | 0.72 | BWI76_RS04465 | | carbamoyl-phosphate synthase small subunit | 0.60 | BWI76_RS04880 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | — | — |
| Kangiella aquimarina DSM 16071 | 0.71 | B158DRAFT_0615 | | carbamoyl-phosphate synthase, small subunit | 0.70 | B158DRAFT_2144 | | pyruvate dehydrogenase E1 component, homodimeric type | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.71 | GFF214 | | Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) | 0.61 | GFF122 | | Pyruvate dehydrogenase E1 component (EC 1.2.4.1) | low | > 78 |
| Escherichia coli BL21 | 0.71 | ECD_00036 | | carbamoyl phosphate synthetase small subunit, glutamine amidotransferase | 0.61 | ECD_00113 | | pyruvate dehydrogenase, decarboxylase component E1, thiamine triphosphate-binding | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.71 | OHPLBJKB_03625 | | Carbamoyl-phosphate synthase small chain | 0.61 | OHPLBJKB_03547 | | Pyruvate dehydrogenase E1 component | — | — |
| Escherichia fergusonii Becca | 0.71 | EFB2_04013 | | Carbamoyl-phosphate synthase small chain | 0.61 | EFB2_03931 | | Pyruvate dehydrogenase E1 component | low | > 86 |
| Escherichia coli Nissle 1917 | 0.71 | ECOLIN_RS00175 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.61 | ECOLIN_RS00640 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | low | > 52 |
| Escherichia coli BW25113 | 0.71 | b0032 | carA | carbamoyl-phosphate synthase small subunit (NCBI) | 0.61 | b0114 | aceE | pyruvate dehydrogenase subunit E1 (NCBI) | low | > 76 |
| Escherichia coli ECRC102 | 0.71 | NIAGMN_08795 | carA | carbamoyl phosphate synthase small subunit | 0.61 | NIAGMN_08350 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | — | — |
| Dickeya dadantii 3937 | 0.71 | DDA3937_RS18310 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.60 | DDA3937_RS17925 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | — | — |
| Escherichia coli ECRC101 | 0.71 | MCAODC_01460 | carA | carbamoyl phosphate synthase small subunit | 0.61 | MCAODC_01015 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | — | — |
| Escherichia coli ECRC101 | 0.71 | OKFHMN_10945 | carA | carbamoyl phosphate synthase small subunit | 0.61 | OKFHMN_10500 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | — | — |
| Dickeya dianthicola ME23 | 0.71 | DZA65_RS19385 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.60 | DZA65_RS19000 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | — | — |
| Escherichia coli ECOR27 | 0.71 | NOLOHH_03275 | carA | carbamoyl phosphate synthase small subunit | 0.61 | NOLOHH_02845 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | — | — |
| Escherichia coli ECRC99 | 0.71 | KEDOAH_17210 | carA | carbamoyl phosphate synthase small subunit | 0.61 | KEDOAH_17655 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | — | — |
| Alteromonas macleodii MIT1002 | 0.71 | MIT1002_01466 | | Carbamoyl-phosphate synthase small chain | 0.65 | MIT1002_03003 | | Pyruvate dehydrogenase E1 component | low | > 70 |
| Escherichia coli ECRC62 | 0.71 | BNILDI_08325 | carA | carbamoyl phosphate synthase small subunit | 0.61 | BNILDI_08765 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | — | — |
| Escherichia coli ECRC98 | 0.71 | JDDGAC_14540 | carA | carbamoyl phosphate synthase small subunit | 0.61 | JDDGAC_14095 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | — | — |
| Enterobacter sp. TBS_079 | 0.71 | MPMX20_00739 | | Carbamoyl-phosphate synthase small chain | 0.60 | MPMX20_00807 | | Pyruvate dehydrogenase E1 component | low | > 85 |
| Dickeya dianthicola 67-19 | 0.71 | HGI48_RS18245 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.60 | HGI48_RS17850 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | — | — |
| Shewanella loihica PV-4 | 0.71 | Shew_2839 | | carbamoyl phosphate synthase small subunit (RefSeq) | 0.67 | Shew_3431 | aceE | pyruvate dehydrogenase subunit E1 (RefSeq) | low | > 60 |
| Escherichia coli ECOR38 | 0.71 | HEPCGN_08930 | carA | carbamoyl phosphate synthase small subunit | 0.61 | HEPCGN_08480 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | low | > 85 |
| Lysobacter sp. OAE881 | 0.70 | ABIE51_RS11625 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.62 | ABIE51_RS18795 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | — | — |
| Shewanella sp. ANA-3 | 0.70 | Shewana3_0967 | | carbamoyl phosphate synthase small subunit (RefSeq) | 0.67 | Shewana3_0426 | aceE | pyruvate dehydrogenase subunit E1 (RefSeq) | low | > 73 |
| Serratia liquefaciens MT49 | 0.70 | IAI46_03190 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.60 | IAI46_21325 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.76 | 23 |
| Acinetobacter radioresistens SK82 | 0.70 | MPMX26_00767 | | Carbamoyl-phosphate synthase small chain | 0.61 | MPMX26_02925 | | Pyruvate dehydrogenase E1 component | low | > 36 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.70 | Xcc-8004.2914.1 | | Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) | 0.63 | Xcc-8004.754.1 | | Pyruvate dehydrogenase E1 component (EC 1.2.4.1) | — | — |
| Pantoea sp. MT58 | 0.69 | IAI47_16120 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.60 | IAI47_15810 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | low | > 76 |
| Dechlorosoma suillum PS | 0.69 | Dsui_3065 | | carbamoyl-phosphate synthase, small subunit | 0.65 | Dsui_1578 | | pyruvate dehydrogenase E1 component, homodimeric type | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.69 | RR42_RS13520 | | carbamoyl phosphate synthase small subunit | 0.64 | RR42_RS26125 | | pyruvate dehydrogenase | — | — |
| Ralstonia solanacearum PSI07 | 0.69 | RPSI07_RS15245 | | carbamoyl-phosphate synthase small subunit | 0.64 | RPSI07_RS15815 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | — | — |
| Ralstonia solanacearum UW163 | 0.68 | UW163_RS15510 | | carbamoyl-phosphate synthase small subunit | 0.64 | UW163_RS14980 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.68 | RALBFv3_RS02200 | | carbamoyl-phosphate synthase small subunit | 0.64 | RALBFv3_RS01670 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | — | — |
| Ralstonia sp. UNC404CL21Col | 0.68 | ABZR87_RS14150 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.64 | ABZR87_RS13470 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.68 | QEN71_RS04775 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.65 | QEN71_RS05725 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | — | — |
| Erwinia tracheiphila SCR3 | 0.68 | LU632_RS02755 | carA | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.60 | LU632_RS03080 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | — | — |
| Ralstonia solanacearum GMI1000 | 0.68 | RS_RS07620 | | carbamoyl-phosphate synthase small subunit | 0.64 | RS_RS08055 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | — | — |
| Herbaspirillum seropedicae SmR1 | 0.68 | HSERO_RS06920 | | carbamoyl phosphate synthase small subunit | 0.66 | HSERO_RS07305 | | pyruvate dehydrogenase | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.67 | LRK54_RS17995 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.60 | LRK54_RS11175 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | — | — |
| Rhodanobacter denitrificans MT42 | 0.66 | LRK55_RS17850 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.60 | LRK55_RS10880 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | — | — |
| Burkholderia phytofirmans PsJN | 0.66 | BPHYT_RS14195 | | carbamoyl phosphate synthase small subunit | 0.65 | BPHYT_RS12840 | | pyruvate dehydrogenase | 0.52 | 93 |
| Dyella japonica UNC79MFTsu3.2 | 0.66 | ABZR86_RS05605 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.64 | ABZR86_RS12410 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | — | — |
| Acidovorax sp. GW101-3H11 | 0.66 | Ac3H11_435 | | Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) | 0.61 | Ac3H11_4093 | | Pyruvate dehydrogenase E1 component (EC 1.2.4.1) | — | — |
| Paraburkholderia graminis OAS925 | 0.66 | ABIE53_003005 | | carbamoyl-phosphate synthase small subunit | 0.65 | ABIE53_002793 | | pyruvate dehydrogenase E1 component | — | — |
| Rhodanobacter sp. FW510-T8 | 0.66 | OKGIIK_07300 | | carbamoyl phosphate synthase small subunit | 0.60 | OKGIIK_12700 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.70 | 52 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.66 | H281DRAFT_04402 | | carbamoyl-phosphate synthase small subunit | 0.65 | H281DRAFT_00466 | | pyruvate dehydrogenase E1 component | — | — |
| Variovorax sp. SCN45 | 0.66 | GFF377 | | Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) | 0.60 | GFF967 | | Pyruvate dehydrogenase E1 component (EC 1.2.4.1) | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.64 | GFF4899 | | Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) | 0.60 | GFF4890 | | Pyruvate dehydrogenase E1 component (EC 1.2.4.1) | — | — |
| Castellaniella sp019104865 MT123 | 0.62 | ABCV34_RS15505 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.63 | ABCV34_RS04160 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | — | — |
| Phaeobacter inhibens DSM 17395 | 0.52 | PGA1_c06670 | | carbamoyl-phosphate synthase small chain | 0.08 | PGA1_c16590 | | transketolase-like protein | low | > 62 |
| Azospirillum sp. SherDot2 | 0.52 | MPMX19_00757 | | Carbamoyl-phosphate synthase small chain | 0.08 | MPMX19_03172 | | Pyruvate dehydrogenase E1 component | — | — |
| Dinoroseobacter shibae DFL-12 | 0.49 | Dshi_2387 | | carbamoyl-phosphate synthase, small subunit (RefSeq) | 0.61 | Dshi_1968 | | 2-oxo-acid dehydrogenase E1 subunit, homodimeric type (RefSeq) | — | — |
| Bosea sp. OAE506 | 0.47 | ABIE41_RS11975 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.08 | ABIE41_RS08425 | | transketolase | — | — |
| Caulobacter crescentus NA1000 | 0.47 | CCNA_02925 | | carbamoyl-phosphate synthase small chain | 0.08 | CCNA_01263 | | pyruvate dehydrogenase E1 component | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.47 | CCNA_02925 | | carbamoyl-phosphate synthase small chain | 0.08 | CCNA_01263 | | pyruvate dehydrogenase E1 component | low | > 67 |
| Mycobacterium tuberculosis H37Rv | 0.38 | Rv1383 | | Probable carbamoyl-phosphate synthase small chain CarA (carbamoyl-phosphate synthetase glutamine chain) | 0.51 | Rv2241 | | Pyruvate dehydrogenase E1 component AceE (pyruvate decarboxylase) (pyruvate dehydrogenase) (pyruvic dehydrogenase) | — | — |
Not shown: 27 genomes with orthologs for PP_4724 only; 0 genomes with orthologs for PP_0339 only