Conservation of cofitness between PP_4379 and PP_0123 in Pseudomonas putida KT2440

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4379 Beta-ketoacyl-acyl-carrier-protein synthase I 1.0 PP_0123 DNA polymerase I, 5 0.38 9
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_03885 beta-ketoacyl-ACP synthase 0.80 AO356_11465 DNA polymerase I low > 104
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_18630 beta-ketoacyl-ACP synthase 0.80 AO353_10930 DNA polymerase I low > 101
Pseudomonas sp. RS175 0.84 PFR28_00820 3-oxoacyl-[acyl-carrier-protein] synthase 3 0.79 PFR28_04624 DNA polymerase I low > 88
Pseudomonas simiae WCS417 0.84 PS417_19855 beta-ketoacyl-ACP synthase 0.79 PS417_00405 DNA polymerase I
Pseudomonas syringae pv. syringae B728a ΔmexB 0.84 Psyr_3467 3-oxoacyl-[acyl-carrier protein] synthase 0.79 Psyr_0270 DNA polymerase I
Pseudomonas syringae pv. syringae B728a 0.84 Psyr_3467 3-oxoacyl-[acyl-carrier protein] synthase 0.79 Psyr_0270 DNA polymerase I
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS21825 ketoacyl-ACP synthase III 0.77 PFLU_RS00395 DNA polymerase I low > 109
Pseudomonas fluorescens SBW25 0.84 PFLU_RS21825 ketoacyl-ACP synthase III 0.77 PFLU_RS00395 DNA polymerase I low > 109
Pseudomonas fluorescens GW456-L13 0.81 PfGW456L13_4365 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.180) 0.76 PfGW456L13_594 DNA polymerase I (EC 2.7.7.7) low > 87
Pseudomonas fluorescens FW300-N1B4 0.80 Pf1N1B4_3591 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) 0.79 Pf1N1B4_1875 DNA polymerase I (EC 2.7.7.7)
Pseudomonas fluorescens FW300-N2E2 0.79 Pf6N2E2_2605 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.180) 0.80 Pf6N2E2_4162 DNA polymerase I (EC 2.7.7.7) low > 103
Herbaspirillum seropedicae SmR1 0.41 HSERO_RS21040 3-oxoacyl-ACP synthase 0.53 HSERO_RS02260 DNA polymerase I low > 78
Burkholderia phytofirmans PsJN 0.26 BPHYT_RS19110 3-oxoacyl-ACP synthase 0.51 BPHYT_RS33610 DNA polymerase I low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.22 GFF164 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.180) 0.45 GFF5584 DNA polymerase I (EC 2.7.7.7) low > 90
Magnetospirillum magneticum AMB-1 0.21 AMB_RS11890 3-oxoacyl-ACP synthase III 0.39 AMB_RS21305 DNA polymerase I
Cupriavidus basilensis FW507-4G11 0.21 RR42_RS14110 3-oxoacyl-ACP synthase 0.52 RR42_RS15050 DNA polymerase I
Ralstonia solanacearum GMI1000 0.21 RS_RS05200 3-oxoacyl-ACP synthase III 0.51 RS_RS11195 DNA polymerase I
Fusobacterium nucleatum SB010 0.20 HUW76_02230 ketoacyl-ACP synthase III 0.26 HUW76_04385 DNA polymerase I
Rhodopseudomonas palustris CGA009 0.20 TX73_014200 ketoacyl-ACP synthase III 0.36 TX73_024545 DNA polymerase I
Ralstonia solanacearum PSI07 0.20 RPSI07_RS19040 ketoacyl-ACP synthase III 0.51 RPSI07_RS13480 DNA polymerase I
Ralstonia solanacearum UW163 0.20 UW163_RS11885 ketoacyl-ACP synthase III 0.51 UW163_RS09920 DNA polymerase I
Ralstonia solanacearum IBSBF1503 0.20 RALBFv3_RS14420 ketoacyl-ACP synthase III 0.51 RALBFv3_RS03750 DNA polymerase I
Paraburkholderia sabiae LMG 24235 0.20 QEN71_RS04545 beta-ketoacyl-ACP synthase III 0.52 QEN71_RS17885 DNA polymerase I
Paraburkholderia graminis OAS925 0.20 ABIE53_003049 3-oxoacyl-[acyl-carrier-protein] synthase-3 0.51 ABIE53_004852 DNA polymerase-1
Rhizobium sp. OAE497 0.20 ABIE40_RS06785 beta-ketoacyl-ACP synthase III 0.31 ABIE40_RS00490 DNA polymerase I
Lysobacter sp. OAE881 0.20 ABIE51_RS13955 beta-ketoacyl-ACP synthase III 0.52 ABIE51_RS02010 DNA polymerase I
Paraburkholderia bryophila 376MFSha3.1 0.19 H281DRAFT_04349 3-oxoacyl-[acyl-carrier-protein] synthase III 0.50 H281DRAFT_06022 DNA polymerase I
Sphingomonas koreensis DSMZ 15582 0.19 Ga0059261_2323 3-oxoacyl-(acyl-carrier-protein) synthase III 0.35 Ga0059261_2244 DNA polymerase I (EC 2.7.7.7)
Synechococcus elongatus PCC 7942 0.19 Synpcc7942_1455 fabH 3-oxoacyl-(acyl carrier protein) synthase III 0.31 Synpcc7942_0194 polA DNA polymerase I
Brevundimonas sp. GW460-12-10-14-LB2 0.19 A4249_RS05970 ketoacyl-ACP synthase III 0.39 A4249_RS13840 DNA polymerase I
Bosea sp. OAE506 0.19 ABIE41_RS19690 beta-ketoacyl-ACP synthase III 0.31 ABIE41_RS03570 DNA polymerase I
Xanthomonas campestris pv. campestris strain 8004 0.19 Xcc-8004.3998.1 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) 0.52 Xcc-8004.5105.1 DNA polymerase I (EC 2.7.7.7)
Phaeobacter inhibens DSM 17395 0.19 PGA1_c11240 3-oxoacyl-[acyl-carrier-protein] synthase 3 0.39 PGA1_c31780 DNA polymerase I
Marinobacter adhaerens HP15 0.19 HP15_1625 3-oxoacyl-(acyl carrier protein) synthase III 0.56 HP15_293 DNA polymerase I low > 73
Kangiella aquimarina DSM 16071 0.19 B158DRAFT_1755 3-oxoacyl-(acyl-carrier-protein) synthase III 0.57 B158DRAFT_0499 DNA polymerase I (EC 2.7.7.7)
Enterobacter asburiae PDN3 0.18 EX28DRAFT_1838 3-oxoacyl-(acyl-carrier-protein) synthase III 0.60 EX28DRAFT_4343 DNA polymerase I (EC 2.7.7.7)
Pectobacterium carotovorum WPP14 0.18 HER17_RS08640 ketoacyl-ACP synthase III 0.61 HER17_RS21470 DNA polymerase I
Dechlorosoma suillum PS 0.18 Dsui_2446 3-oxoacyl-(acyl-carrier-protein) synthase III 0.52 Dsui_0459 DNA polymerase I
Vibrio cholerae E7946 ATCC 55056 0.18 CSW01_10105 3-oxoacyl-ACP synthase III 0.61 CSW01_00560 DNA polymerase I
Acidovorax sp. GW101-3H11 0.18 Ac3H11_1580 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.180) 0.48 Ac3H11_1648 DNA polymerase I (EC 2.7.7.7)
Enterobacter sp. TBS_079 0.18 MPMX20_01771 3-oxoacyl-[acyl-carrier-protein] synthase 3 0.60 MPMX20_04601 DNA polymerase I
Ralstonia sp. UNC404CL21Col 0.18 ABZR87_RS10135 beta-ketoacyl-ACP synthase III 0.52 ABZR87_RS15680 DNA polymerase I
Caulobacter crescentus NA1000 Δfur 0.18 CCNA_01432 3-oxoacyl-(acyl-carrier-protein) synthase III 0.40 CCNA_03577 DNA polymerase I
Caulobacter crescentus NA1000 0.18 CCNA_01432 3-oxoacyl-(acyl-carrier-protein) synthase III 0.40 CCNA_03577 DNA polymerase I
Desulfovibrio vulgaris Miyazaki F 0.18 DvMF_3101 3-oxoacyl-(acyl-carrier-protein) synthase III (RefSeq) 0.25 DvMF_1713 DNA polymerase I (RefSeq)
Echinicola vietnamensis KMM 6221, DSM 17526 0.18 Echvi_0188 3-oxoacyl-(acyl-carrier-protein) synthase III 0.36 Echvi_1032 DNA polymerase I
Shewanella amazonensis SB2B 0.18 Sama_1982 3-oxoacyl-(acyl carrier protein) synthase III (RefSeq) 0.61 Sama_0093 DNA-directed DNA polymerase (RefSeq)
Klebsiella michiganensis M5al 0.18 BWI76_RS11080 ketoacyl-ACP synthase III 0.59 BWI76_RS00355 DNA polymerase I
Shewanella oneidensis MR-1 0.18 SO2778 fabH-1 3-oxoacyl-(acyl-carrier-protein) synthase III (NCBI ptt file) 0.60 SO4669 polA DNA polymerase I (NCBI ptt file)
Shewanella sp. ANA-3 0.17 Shewana3_2560 3-oxoacyl-(acyl carrier protein) synthase III (RefSeq) 0.61 Shewana3_4109 DNA polymerase I (RefSeq)
Variovorax sp. OAS795 0.17 ABID97_RS08300 beta-ketoacyl-ACP synthase III 0.48 ABID97_RS09180 DNA polymerase I
Rhodospirillum rubrum S1H 0.17 Rru_A1667 Beta-ketoacyl-acyl carrier protein synthase III (FabH) (NCBI) 0.36 Rru_A3514 DNA polymerase A (NCBI)
Variovorax sp. SCN45 0.17 GFF3857 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.180) 0.49 GFF4006 DNA polymerase I (EC 2.7.7.7)
Bacteroides thetaiotaomicron VPI-5482 0.17 BT0122 3-oxoacyl-[acyl-carrier-protein] synthase III (NCBI ptt file) 0.36 BT3260 DNA polymerase I (NCBI ptt file) low > 81
Dinoroseobacter shibae DFL-12 0.17 Dshi_1720 3-oxoacyl-(acyl-carrier-protein) synthase III (RefSeq) 0.40 Dshi_2909 DNA polymerase I (RefSeq)
Pontibacter actiniarum KMM 6156, DSM 19842 0.17 CA264_03820 ketoacyl-ACP synthase III 0.35 CA264_16535 DNA polymerase I
Mycobacterium tuberculosis H37Rv 0.17 Rv0533c 3-oxoacyl-[acyl-carrier-protein] synthase III FabH (beta-ketoacyl-ACP synthase III) (KAS III) 0.26 Rv1629 Probable DNA polymerase I PolA
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.16 GFF3373 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) 0.60 GFF2216 DNA polymerase I (EC 2.7.7.7)
Pedobacter sp. GW460-11-11-14-LB5 0.16 CA265_RS18355 3-oxoacyl-ACP synthase 0.36 CA265_RS19630 DNA polymerase I
Dickeya dadantii 3937 0.16 DDA3937_RS13130 ketoacyl-ACP synthase III 0.59 DDA3937_RS00105 DNA polymerase I
Rahnella sp. WP5 0.15 EX31_RS24425 ketoacyl-ACP synthase III 0.61 EX31_RS15905 DNA polymerase I
Pantoea sp. MT58 0.15 IAI47_12080 ketoacyl-ACP synthase III 0.60 IAI47_00430 DNA polymerase I

Not shown: 1 genomes with orthologs for PP_4379 only; 35 genomes with orthologs for PP_0123 only