Conservation of cofitness between HSERO_RS19445 and HSERO_RS19450 in Herbaspirillum seropedicae SmR1

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS19445 anthranilate phosphoribosyltransferase 1.0 HSERO_RS19450 indole-3-glycerol-phosphate synthase 0.94 3
Cupriavidus basilensis FW507-4G11 0.75 RR42_RS18305 anthranilate phosphoribosyltransferase 0.71 RR42_RS18310 indole-3-glycerol-phosphate synthase 0.39 66
Variovorax sp. OAS795 0.72 ABID97_RS05275 anthranilate phosphoribosyltransferase 0.61 ABID97_RS05280 indole-3-glycerol phosphate synthase TrpC 0.62 7
Paraburkholderia bryophila 376MFSha3.1 0.71 H281DRAFT_05713 anthranilate phosphoribosyltransferase 0.55 H281DRAFT_05712 indole-3-glycerol phosphate synthase 0.77 7
Paraburkholderia sabiae LMG 24235 0.71 QEN71_RS27560 anthranilate phosphoribosyltransferase 0.61 QEN71_RS27565 indole-3-glycerol phosphate synthase TrpC 0.97 5
Paraburkholderia graminis OAS925 0.71 ABIE53_003642 anthranilate phosphoribosyltransferase 0.56 ABIE53_003643 indole-3-glycerol phosphate synthase — —
Burkholderia phytofirmans PsJN 0.71 BPHYT_RS17400 anthranilate phosphoribosyltransferase 0.55 BPHYT_RS17405 indole-3-glycerol phosphate synthase 0.86 24
Ralstonia sp. UNC404CL21Col 0.71 ABZR87_RS02155 anthranilate phosphoribosyltransferase 0.67 ABZR87_RS02160 indole-3-glycerol phosphate synthase TrpC 0.86 13
Dyella japonica UNC79MFTsu3.2 0.70 ABZR86_RS12070 anthranilate phosphoribosyltransferase 0.53 ABZR86_RS12065 indole-3-glycerol phosphate synthase TrpC 0.96 3
Ralstonia solanacearum PSI07 0.70 RPSI07_RS10740 anthranilate phosphoribosyltransferase 0.65 RPSI07_RS10735 indole-3-glycerol phosphate synthase TrpC — —
Acidovorax sp. GW101-3H11 0.70 Ac3H11_771 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.65 Ac3H11_772 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.98 3
Variovorax sp. SCN45 0.69 GFF5891 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.60 GFF5890 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) — —
Ralstonia solanacearum GMI1000 0.69 RS_RS14445 Anthranilate phosphoribosyltransferase 1 0.65 RS_RS14450 Indole-3-glycerol phosphate synthase 1 — —
Ralstonia solanacearum UW163 0.69 UW163_RS07125 anthranilate phosphoribosyltransferase 0.66 UW163_RS07120 indole-3-glycerol phosphate synthase TrpC — —
Ralstonia solanacearum IBSBF1503 0.69 RALBFv3_RS06500 anthranilate phosphoribosyltransferase 0.66 RALBFv3_RS06505 indole-3-glycerol phosphate synthase TrpC — —
Dechlorosoma suillum PS 0.69 Dsui_0169 anthranilate phosphoribosyltransferase 0.56 Dsui_0168 Indole-3-glycerol phosphate synthase — —
Rhodanobacter sp. FW510-T8 0.68 OKGIIK_12285 trpD anthranilate phosphoribosyltransferase 0.50 OKGIIK_12280 trpC indole-3-glycerol phosphate synthase TrpC low > 52
Rhodanobacter denitrificans MT42 0.68 LRK55_RS11295 anthranilate phosphoribosyltransferase 0.47 LRK55_RS11300 indole-3-glycerol phosphate synthase TrpC low > 63
Rhodanobacter denitrificans FW104-10B01 0.68 LRK54_RS11565 anthranilate phosphoribosyltransferase 0.46 LRK54_RS11570 indole-3-glycerol phosphate synthase TrpC 0.76 3
Hydrogenophaga sp. GW460-11-11-14-LB1 0.67 GFF3110 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.64 GFF3111 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.94 1
Xanthomonas campestris pv. campestris strain 8004 0.67 Xcc-8004.621.1 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.51 Xcc-8004.622.1 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.94 6
Lysobacter sp. OAE881 0.65 ABIE51_RS04180 anthranilate phosphoribosyltransferase 0.54 ABIE51_RS04190 indole-3-glycerol phosphate synthase TrpC 0.89 10
Castellaniella sp019104865 MT123 0.58 ABCV34_RS10305 anthranilate phosphoribosyltransferase 0.58 ABCV34_RS10310 indole-3-glycerol phosphate synthase TrpC — —
Pseudomonas stutzeri RCH2 0.45 Psest_3648 anthranilate phosphoribosyltransferase 0.52 Psest_3647 Indole-3-glycerol phosphate synthase 0.95 3
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_4580 anthranilate phosphoribosyltransferase 0.50 Psyr_4579 indole-3-glycerol phosphate synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_4580 anthranilate phosphoribosyltransferase 0.50 Psyr_4579 indole-3-glycerol phosphate synthase low > 86
Pseudomonas putida KT2440 0.42 PP_0421 Anthranilate phosphoribosyltransferase 0.49 PP_0422 Indole-3-glycerol phosphate synthase 0.94 3
Acinetobacter radioresistens SK82 0.42 MPMX26_00984 Anthranilate phosphoribosyltransferase 0.46 MPMX26_00983 Indole-3-glycerol phosphate synthase 0.99 4
Pseudomonas sp. S08-1 0.42 OH686_15135 Anthranilate phosphoribosyltransferase 0.53 OH686_15140 Indole-3-glycerol phosphate synthase 0.81 2
Marinobacter adhaerens HP15 0.41 HP15_3290 anthranilate phosphoribosyltransferase 0.49 HP15_3291 indole-3-glycerol phosphate synthase 0.89 3
Rhodopseudomonas palustris CGA009 0.40 TX73_014980 anthranilate phosphoribosyltransferase 0.46 TX73_014985 indole-3-glycerol phosphate synthase TrpC — —
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_1221 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.50 PfGW456L13_1222 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.98 3
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_4825 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.52 Pf6N2E2_4826 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.97 1
Pseudomonas sp. RS175 0.40 PFR28_04044 Anthranilate phosphoribosyltransferase 0.52 PFR28_04043 Indole-3-glycerol phosphate synthase — —
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_2548 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.50 Pf1N1B4_2549 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.93 5
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_14435 anthranilate phosphoribosyltransferase 0.51 AO356_14440 indole-3-glycerol-phosphate synthase 0.96 7
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_07215 anthranilate phosphoribosyltransferase 0.50 AO353_07210 indole-3-glycerol-phosphate synthase 0.96 3
Pseudomonas simiae WCS417 0.39 PS417_25715 anthranilate phosphoribosyltransferase 0.50 PS417_25710 indole-3-glycerol-phosphate synthase 0.86 12
Pseudomonas fluorescens SBW25 0.39 PFLU_RS27370 anthranilate phosphoribosyltransferase 0.49 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.83 8
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS27370 anthranilate phosphoribosyltransferase 0.49 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.94 2
Rhizobium sp. OAE497 0.37 ABIE40_RS09545 anthranilate phosphoribosyltransferase 0.45 ABIE40_RS09550 indole-3-glycerol phosphate synthase TrpC — —
Agrobacterium fabrum C58 0.36 Atu1687 anthranilate phosphoribosyltransferase 0.45 Atu1688 indole-3-glycerol-phosphate synthase 0.96 2
Azospirillum brasilense Sp245 0.36 AZOBR_RS07455 anthranilate phosphoribosyltransferase 0.42 AZOBR_RS07450 indole-3-glycerol-phosphate synthase 0.75 1
Magnetospirillum magneticum AMB-1 0.35 AMB_RS14410 anthranilate phosphoribosyltransferase 0.43 AMB_RS14415 indole-3-glycerol phosphate synthase TrpC — —
Sinorhizobium meliloti 1021 0.35 SMc00235 anthranilate phosphoribosyltransferase 0.42 SMc00236 Indole-3-glycerol phosphate synthase 0.96 5
Rhodospirillum rubrum S1H 0.35 Rru_A1896 Anthranilate phosphoribosyl transferase (NCBI) 0.40 Rru_A1897 Indole-3-glycerol-phosphate synthase (NCBI) 0.93 13
Bosea sp. OAE506 0.33 ABIE41_RS17420 anthranilate phosphoribosyltransferase 0.43 ABIE41_RS17425 indole-3-glycerol phosphate synthase TrpC — —
Azospirillum sp. SherDot2 0.33 MPMX19_01015 Anthranilate phosphoribosyltransferase 0.42 MPMX19_01014 Indole-3-glycerol phosphate synthase 0.68 31
Phaeobacter inhibens DSM 17395 0.33 PGA1_c16890 anthranilate phosphoribosyltransferase TrpD 0.40 PGA1_c16910 indole-3-glycerol phosphate synthase TrpC — —
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_01975 anthranilate phosphoribosyltransferase 0.40 CCNA_01976 Indole-3-glycerol phosphate synthase low > 67
Caulobacter crescentus NA1000 0.33 CCNA_01975 anthranilate phosphoribosyltransferase 0.40 CCNA_01976 Indole-3-glycerol phosphate synthase 0.99 1
Dinoroseobacter shibae DFL-12 0.31 Dshi_1799 anthranilate phosphoribosyltransferase (RefSeq) 0.43 Dshi_1800 Indole-3-glycerol-phosphate synthase (RefSeq) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.30 A4249_RS06170 anthranilate phosphoribosyltransferase 0.39 A4249_RS06175 indole-3-glycerol phosphate synthase TrpC — —
Desulfovibrio vulgaris Hildenborough JW710 0.28 DVU0467 trpD anthranilate phosphoribosyltransferase (TIGR) 0.21 DVU0468 trpC indole-3-glycerol phosphate synthase (TIGR) 0.99 1
Synechococcus elongatus PCC 7942 0.27 Synpcc7942_2123 trpD anthranilate phosphoribosyltransferase 0.33 Synpcc7942_1197 trpC indole-3-glycerol-phosphate synthase — —
Sphingomonas koreensis DSMZ 15582 0.26 Ga0059261_0929 anthranilate phosphoribosyltransferase 0.44 Ga0059261_0930 indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.97 2
Bacteroides thetaiotaomicron VPI-5482 0.25 BT0530 anthranilate phosphoribosyltransferase (EC 2.4.2.18) (from data) 0.38 BT0529 indole-3-glycerol phosphate synthase (NCBI ptt file) 0.83 37
Bacteroides ovatus ATCC 8483 0.24 BACOVA_03782 anthranilate phosphoribosyltransferase 0.37 BACOVA_03783 indole-3-glycerol phosphate synthase 0.96 6
Echinicola vietnamensis KMM 6221, DSM 17526 0.24 Echvi_2507 anthranilate phosphoribosyltransferase 0.34 Echvi_2508 Indole-3-glycerol phosphate synthase — —
Bacteroides stercoris CC31F 0.24 HMPREF1181_RS15335 anthranilate phosphoribosyltransferase 0.32 HMPREF1181_RS15340 indole-3-glycerol phosphate synthase TrpC 0.96 2
Parabacteroides merdae CL09T00C40 0.23 HMPREF1078_RS00135 anthranilate phosphoribosyltransferase 0.33 HMPREF1078_RS00130 indole-3-glycerol phosphate synthase TrpC 0.97 21
Phocaeicola vulgatus CL09T03C04 0.23 HMPREF1058_RS07185 anthranilate phosphoribosyltransferase 0.29 HMPREF1058_RS07190 indole-3-glycerol phosphate synthase TrpC 0.96 3
Mucilaginibacter yixingensis YX-36 DSM 26809 0.22 ABZR88_RS10675 anthranilate phosphoribosyltransferase 0.32 ABZR88_RS16605 indole-3-glycerol phosphate synthase TrpC — —
Pedobacter sp. GW460-11-11-14-LB5 0.22 CA265_RS05010 anthranilate phosphoribosyltransferase (EC 2.4.2.18) (from data) 0.35 CA265_RS22900 indole-3-glycerol phosphate synthase 0.66 53

Not shown: 17 genomes with orthologs for HSERO_RS19445 only; 0 genomes with orthologs for HSERO_RS19450 only