| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Herbaspirillum seropedicae SmR1 | 1.0 | HSERO_RS21375 | | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase | 1.0 | HSERO_RS17905 | | tRNA-dihydrouridine synthase A | 0.34 | 6 |
| Cupriavidus basilensis FW507-4G11 | 0.51 | RR42_RS18480 | | SAM-dependent methyltransferase | 0.64 | RR42_RS12665 | | tRNA-dihydrouridine synthase A | — | — |
| Burkholderia phytofirmans PsJN | 0.51 | BPHYT_RS17520 | | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase | 0.67 | BPHYT_RS08700 | | tRNA-dihydrouridine synthase A | low | > 109 |
| Paraburkholderia graminis OAS925 | 0.50 | ABIE53_003664 | | release factor glutamine methyltransferase | 0.65 | ABIE53_001975 | | tRNA-dihydrouridine synthase A | low | > 113 |
| Ralstonia sp. UNC404CL21Col | 0.50 | ABZR87_RS02260 | | peptide chain release factor N(5)-glutamine methyltransferase | 0.67 | ABZR87_RS11300 | | tRNA dihydrouridine(20/20a) synthase DusA | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.49 | H281DRAFT_05691 | | [protein release factor]-glutamine N5-methyltransferase | 0.65 | H281DRAFT_00766 | | tRNA-U16,U17-dihydrouridine synthase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.49 | QEN71_RS27675 | | peptide chain release factor N(5)-glutamine methyltransferase | 0.66 | QEN71_RS22650 | | tRNA dihydrouridine(20/20a) synthase DusA | low | > 153 |
| Ralstonia solanacearum GMI1000 | 0.46 | RS_RS14545 | | peptide chain release factor N(5)-glutamine methyltransferase | 0.68 | RS_RS06510 | | tRNA dihydrouridine(20/20a) synthase DusA | — | — |
| Ralstonia solanacearum PSI07 | 0.46 | RPSI07_RS10635 | | peptide chain release factor N(5)-glutamine methyltransferase | 0.68 | RPSI07_RS17630 | | tRNA dihydrouridine(20/20a) synthase DusA | — | — |
| Ralstonia solanacearum UW163 | 0.46 | UW163_RS07030 | | peptide chain release factor N(5)-glutamine methyltransferase | 0.68 | UW163_RS13175 | | tRNA dihydrouridine(20/20a) synthase DusA | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.46 | RALBFv3_RS06595 | | peptide chain release factor N(5)-glutamine methyltransferase | 0.68 | RALBFv3_RS15730 | | tRNA dihydrouridine(20/20a) synthase DusA | low | > 76 |
| Dyella japonica UNC79MFTsu3.2 | 0.44 | ABZR86_RS19370 | | peptide chain release factor N(5)-glutamine methyltransferase | 0.49 | ABZR86_RS18350 | | tRNA dihydrouridine(20/20a) synthase DusA | — | — |
| Castellaniella sp019104865 MT123 | 0.44 | ABCV34_RS14060 | | peptide chain release factor N(5)-glutamine methyltransferase | 0.51 | ABCV34_RS04335 | | tRNA dihydrouridine(20/20a) synthase DusA | — | — |
| Rhodanobacter sp. FW510-T8 | 0.43 | OKGIIK_02015 | | Release factor glutamine methyltransferase | 0.47 | OKGIIK_00625 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | — | — |
| Erwinia tracheiphila SCR3 | 0.43 | LU632_RS10740 | prmC | peptide chain release factor N(5)-glutamine methyltransferase | 0.48 | LU632_RS23765 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | — | — |
| Pectobacterium carotovorum WPP14 | 0.42 | HER17_RS10485 | | peptide chain release factor N(5)-glutamine methyltransferase | 0.51 | HER17_RS03680 | | tRNA dihydrouridine(20/20a) synthase DusA | low | > 75 |
| Serratia liquefaciens MT49 | 0.42 | IAI46_10285 | | peptide chain release factor N(5)-glutamine methyltransferase | 0.52 | IAI46_22970 | | tRNA dihydrouridine(20/20a) synthase DusA | low | > 86 |
| Pseudomonas putida KT2440 | 0.42 | PP_0734 | | release factor-(glutamine-N5) methyltransferase | 0.53 | PP_2169 | | tRNA-dihydrouridine synthase A | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.42 | Psyr_0950 | | [protein release factor]-glutamine N5-methyltransferase | 0.53 | Psyr_1936 | | tRNA-U16,U17-dihydrouridine synthase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.42 | Psyr_0950 | | [protein release factor]-glutamine N5-methyltransferase | 0.53 | Psyr_1936 | | tRNA-U16,U17-dihydrouridine synthase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.42 | AO353_14790 | | protein-(glutamine-N5) methyltransferase, release factor-specific | 0.51 | AO353_00295 | | tRNA-dihydrouridine synthase A | — | — |
| Pseudomonas stutzeri RCH2 | 0.42 | Psest_1114 | | protein-(glutamine-N5) methyltransferase, release factor-specific | 0.53 | Psest_2706 | | tRNA dihydrouridine synthase A | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.42 | AO356_16500 | | protein-(glutamine-N5) methyltransferase, release factor-specific | 0.50 | AO356_02170 | | tRNA-dihydrouridine synthase A | — | — |
| Dickeya dianthicola 67-19 | 0.42 | HGI48_RS10935 | | peptide chain release factor N(5)-glutamine methyltransferase | 0.51 | HGI48_RS17540 | | tRNA dihydrouridine(20/20a) synthase DusA | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.42 | Pf1N1B4_2920 | | Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 | 0.51 | Pf1N1B4_57 | | tRNA dihydrouridine synthase A | — | — |
| Enterobacter asburiae PDN3 | 0.41 | EX28DRAFT_0831 | | protein-(glutamine-N5) methyltransferase, release factor-specific | 0.52 | EX28DRAFT_4263 | | tRNA dihydrouridine synthase A | — | — |
| Enterobacter sp. TBS_079 | 0.41 | MPMX20_02635 | | Release factor glutamine methyltransferase | 0.52 | MPMX20_00265 | | tRNA-dihydrouridine(20/20a) synthase | low | > 85 |
| Dickeya dianthicola ME23 | 0.41 | DZA65_RS11395 | | peptide chain release factor N(5)-glutamine methyltransferase | 0.52 | DZA65_RS18620 | | tRNA dihydrouridine(20/20a) synthase DusA | low | > 75 |
| Pseudomonas sp. RS175 | 0.41 | PFR28_03654 | | Release factor glutamine methyltransferase | 0.50 | PFR28_01143 | | tRNA-dihydrouridine(20/20a) synthase | — | — |
| Variovorax sp. SCN45 | 0.41 | GFF2523 | | Peptide chain release factor N(5)-glutamine methyltransferase (EC 2.1.1.297) | 0.59 | GFF928 | | tRNA-dihydrouridine(20/20a) synthase (EC 1.3.1.91) | low | > 127 |
| Pseudomonas fluorescens FW300-N2E2 | 0.41 | Pf6N2E2_5222 | | Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 | 0.50 | Pf6N2E2_2257 | | tRNA dihydrouridine synthase A | — | — |
| Dickeya dadantii 3937 | 0.41 | DDA3937_RS10985 | | peptide chain release factor N(5)-glutamine methyltransferase | 0.51 | DDA3937_RS17480 | | tRNA dihydrouridine(20/20a) synthase DusA | low | > 74 |
| Lysobacter sp. OAE881 | 0.40 | ABIE51_RS05490 | | peptide chain release factor N(5)-glutamine methyltransferase | 0.50 | ABIE51_RS03925 | | tRNA dihydrouridine(20/20a) synthase DusA | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.40 | Xcc-8004.4220.1 | | Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 | 0.48 | Xcc-8004.5010.1 | | tRNA dihydrouridine synthase A | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.40 | CSW01_10840 | | protein-(glutamine-N5) methyltransferase, release factor-specific | 0.51 | CSW01_01985 | | tRNA dihydrouridine(20/20a) synthase DusA | — | — |
| Pseudomonas sp. S08-1 | 0.40 | OH686_07905 | | protein-(glutamine-N5) methyltransferase, release factor-specific | 0.51 | OH686_22745 | | tRNA-dihydrouridine(20/20a) synthase | 0.66 | 43 |
| Escherichia coli ECOR38 | 0.40 | HEPCGN_24920 | prmC | peptide chain release factor N(5)-glutamine methyltransferase | 0.51 | HEPCGN_11560 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | low | > 87 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.40 | GFF2773 | | Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 | 0.52 | GFF1418 | | tRNA dihydrouridine synthase A (EC 1.-.-.-) | low | > 78 |
| Escherichia coli BL21 | 0.40 | ECD_01187 | | RF-1 and RF-2 N5-glutamine methyltransferase | 0.51 | ECD_03921 | | tRNA-dihydrouridine synthase A | — | — |
| Kangiella aquimarina DSM 16071 | 0.39 | B158DRAFT_2064 | | [protein release factor]-glutamine N5-methyltransferase (EC 2.1.1.-) | 0.50 | B158DRAFT_2018 | | tRNA dihydrouridine synthase A | low | > 40 |
| Rahnella sp. WP5 | 0.39 | EX31_RS07310 | | peptide chain release factor N(5)-glutamine methyltransferase | 0.52 | EX31_RS11865 | | tRNA dihydrouridine(20/20a) synthase DusA | — | — |
| Escherichia coli ECRC101 | 0.39 | MCAODC_21805 | prmC | peptide chain release factor N(5)-glutamine methyltransferase | 0.50 | MCAODC_03455 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | — | — |
| Escherichia coli Nissle 1917 | 0.39 | ECOLIN_RS07325 | | peptide chain release factor N(5)-glutamine methyltransferase | 0.51 | ECOLIN_RS23355 | | tRNA dihydrouridine(20/20a) synthase DusA | — | — |
| Escherichia coli ECRC102 | 0.39 | NIAGMN_27780 | prmC | peptide chain release factor N(5)-glutamine methyltransferase | 0.51 | NIAGMN_10790 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | — | — |
| Escherichia coli ECRC98 | 0.39 | JDDGAC_06120 | prmC | peptide chain release factor N(5)-glutamine methyltransferase | 0.51 | JDDGAC_16580 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | low | > 86 |
| Escherichia coli ECRC99 | 0.39 | KEDOAH_25450 | prmC | peptide chain release factor N(5)-glutamine methyltransferase | 0.51 | KEDOAH_15205 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | — | — |
| Alteromonas macleodii MIT1002 | 0.39 | MIT1002_01515 | | Release factor glutamine methyltransferase | 0.46 | MIT1002_03387 | | putative tRNA-dihydrouridine synthase | low | > 70 |
| Escherichia coli ECRC100 | 0.39 | OKFHMN_28455 | prmC | peptide chain release factor N(5)-glutamine methyltransferase | 0.51 | OKFHMN_12945 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | — | — |
| Escherichia fergusonii Becca | 0.39 | EFB2_02715 | | Release factor glutamine methyltransferase | 0.51 | EFB2_04556 | | tRNA-dihydrouridine(20/20a) synthase | — | — |
| Marinobacter adhaerens HP15 | 0.39 | HP15_713 | | modification methylase, HemK family | 0.52 | HP15_2240 | | tRNA-dihydrouridine synthase, TIM-barrel, YjbN | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.39 | GFF1267 | | Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 | 0.55 | GFF4791 | | tRNA dihydrouridine synthase A | low | > 90 |
| Pseudomonas fluorescens SBW25-INTG | 0.39 | PFLU_RS03660 | | peptide chain release factor N(5)-glutamine methyltransferase | 0.51 | PFLU_RS07810 | | tRNA dihydrouridine(20/20a) synthase DusA | — | — |
| Pseudomonas fluorescens SBW25 | 0.39 | PFLU_RS03660 | | peptide chain release factor N(5)-glutamine methyltransferase | 0.51 | PFLU_RS07810 | | tRNA dihydrouridine(20/20a) synthase DusA | — | — |
| Klebsiella michiganensis M5al | 0.39 | BWI76_RS17430 | | protein-(glutamine-N5) methyltransferase, release factor-specific | 0.52 | BWI76_RS01900 | | tRNA-dihydrouridine synthase A | — | — |
| Acidovorax sp. GW101-3H11 | 0.39 | Ac3H11_4779 | | Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 | 0.55 | Ac3H11_2288 | | tRNA dihydrouridine synthase A | — | — |
| Variovorax sp. OAS795 | 0.39 | ABID97_RS07185 | | peptide chain release factor N(5)-glutamine methyltransferase | 0.60 | ABID97_RS13915 | | tRNA dihydrouridine(20/20a) synthase DusA | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.39 | OHPLBJKB_02475 | | Release factor glutamine methyltransferase | 0.51 | OHPLBJKB_03994 | | tRNA-dihydrouridine(20/20a) synthase | low | > 73 |
| Escherichia coli ECRC62 | 0.39 | BNILDI_18760 | prmC | peptide chain release factor N(5)-glutamine methyltransferase | 0.51 | BNILDI_06330 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | low | > 75 |
| Escherichia coli BW25113 | 0.39 | b1212 | prmC | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | 0.51 | b4049 | dusA | tRNA-dihydrouridine synthase A (RefSeq) | — | — |
| Rhodanobacter denitrificans MT42 | 0.39 | LRK55_RS12145 | | peptide chain release factor N(5)-glutamine methyltransferase | 0.49 | LRK55_RS05750 | | tRNA dihydrouridine(20/20a) synthase DusA | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.38 | LRK54_RS12410 | | peptide chain release factor N(5)-glutamine methyltransferase | 0.49 | LRK54_RS05995 | | tRNA dihydrouridine(20/20a) synthase DusA | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.38 | PfGW456L13_1583 | | Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 | 0.47 | PfGW456L13_3987 | | tRNA dihydrouridine synthase A | — | — |
| Escherichia coli ECOR27 | 0.38 | NOLOHH_20605 | prmC | peptide chain release factor N(5)-glutamine methyltransferase | 0.51 | NOLOHH_05195 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | — | — |
| Pseudomonas simiae WCS417 | 0.38 | PS417_03610 | | SAM-dependent methyltransferase | 0.51 | PS417_07740 | | tRNA-dihydrouridine synthase A | — | — |
| Shewanella amazonensis SB2B | 0.38 | Sama_2565 | | hemK family protein (RefSeq) | 0.50 | Sama_3055 | | tRNA-dihydrouridine synthase A (RefSeq) | — | — |
| Pantoea sp. MT58 | 0.37 | IAI47_11265 | | peptide chain release factor N(5)-glutamine methyltransferase | 0.51 | IAI47_17865 | | tRNA dihydrouridine(20/20a) synthase DusA | — | — |
| Shewanella sp. ANA-3 | 0.37 | Shewana3_0770 | | HemK family modification methylase (RefSeq) | 0.51 | Shewana3_0718 | | tRNA-dihydrouridine synthase A (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.37 | SO3832 | | hemK family protein (NCBI ptt file) | 0.51 | SO3912 | | TIM-barrel protein, yjbN family (NCBI ptt file) | low | > 76 |
| Shewanella loihica PV-4 | 0.36 | Shew_2911 | | HemK family modification methylase (RefSeq) | 0.50 | Shew_0536 | | tRNA-dihydrouridine synthase A (RefSeq) | — | — |
| Acinetobacter radioresistens SK82 | 0.36 | MPMX26_01175 | | Release factor glutamine methyltransferase | 0.51 | MPMX26_00482 | | tRNA-dihydrouridine(20/20a) synthase | low | > 36 |
| Caulobacter crescentus NA1000 | 0.30 | CCNA_00918 | | peptide release factor-glutamine N5-methyltransferase | 0.44 | CCNA_01364 | | NIFR3-like protein | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.30 | CCNA_00918 | | peptide release factor-glutamine N5-methyltransferase | 0.44 | CCNA_01364 | | NIFR3-like protein | — | — |
| Rhodopseudomonas palustris CGA009 | 0.28 | TX73_003140 | | peptide chain release factor N(5)-glutamine methyltransferase | 0.47 | TX73_010150 | | tRNA dihydrouridine(20/20a) synthase DusA | — | — |
| Phaeobacter inhibens DSM 17395 | 0.27 | PGA1_c19880 | | methyltransferase, HemK family | 0.43 | PGA1_c19230 | | tRNA-dihydrouridine synthase A | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.27 | A4249_RS11000 | | peptide chain release factor N(5)-glutamine methyltransferase | 0.45 | A4249_RS10515 | | tRNA dihydrouridine(20/20a) synthase DusA | — | — |
| Azospirillum brasilense Sp245 | 0.27 | AZOBR_RS18930 | | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase | 0.51 | AZOBR_RS15935 | | tRNA-dihydrouridine synthase A | — | — |
| Azospirillum sp. SherDot2 | 0.25 | MPMX19_02446 | | Release factor glutamine methyltransferase | 0.51 | MPMX19_00670 | | tRNA-dihydrouridine(20/20a) synthase | — | — |
| Rhizobium sp. OAE497 | 0.25 | ABIE40_RS17290 | | peptide chain release factor N(5)-glutamine methyltransferase | 0.45 | ABIE40_RS10895 | | tRNA dihydrouridine(20/20a) synthase DusA | low | > 107 |
| Sinorhizobium meliloti 1021 | 0.24 | SMc02435 | | methyltransferase | 0.38 | SMc04235 | | tRNA-dihydrouridine synthase A | low | > 103 |
| Agrobacterium fabrum C58 | 0.24 | Atu4175 | | protoporphyrinogen oxidase | 0.44 | Atu1515 | | hypothetical protein | — | — |
Not shown: 13 genomes with orthologs for HSERO_RS21375 only; 4 genomes with orthologs for HSERO_RS17905 only