Conservation of cofitness between HSERO_RS03350 and HSERO_RS17720 in Herbaspirillum seropedicae SmR1

77 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS03350 hypothetical protein 1.0 HSERO_RS17720 aminopeptidase N 0.43 1
Ralstonia sp. UNC404CL21Col 0.74 ABZR87_RS08070 pyruvate kinase 0.62 ABZR87_RS15120 aminopeptidase N low > 80
Burkholderia phytofirmans PsJN 0.73 BPHYT_RS16265 hypothetical protein 0.61 BPHYT_RS15210 aminopeptidase N low > 109
Paraburkholderia bryophila 376MFSha3.1 0.73 H281DRAFT_04189 pyruvate kinase 0.60 H281DRAFT_03988 alanyl aminopeptidase. Metallo peptidase. MEROPS family M01 0.59 1
Paraburkholderia graminis OAS925 0.73 ABIE53_003427 pyruvate kinase 0.60 ABIE53_003216 aminopeptidase N low > 113
Ralstonia solanacearum PSI07 0.73 RPSI07_RS21150 pyruvate kinase 0.62 RPSI07_RS14040 aminopeptidase N low > 81
Ralstonia solanacearum GMI1000 0.72 RS_RS02865 pyruvate kinase 0.61 RS_RS10660 aminopeptidase N low > 80
Paraburkholderia sabiae LMG 24235 0.72 QEN71_RS02430 pyruvate kinase 0.60 QEN71_RS03785 aminopeptidase N low > 153
Ralstonia solanacearum IBSBF1503 0.72 RALBFv3_RS12180 pyruvate kinase 0.63 RALBFv3_RS03270 aminopeptidase N low > 76
Ralstonia solanacearum UW163 0.72 UW163_RS01430 pyruvate kinase 0.63 UW163_RS10455 aminopeptidase N — —
Cupriavidus basilensis FW507-4G11 0.72 RR42_RS03210 pyruvate kinase 0.64 RR42_RS05200 aminopeptidase N 0.37 26
Hydrogenophaga sp. GW460-11-11-14-LB1 0.67 GFF2780 Pyruvate kinase (EC 2.7.1.40) 0.56 GFF275 Membrane alanine aminopeptidase N (EC 3.4.11.2) low > 90
Acidovorax sp. GW101-3H11 0.67 Ac3H11_654 Pyruvate kinase (EC 2.7.1.40) 0.56 Ac3H11_2633 Membrane alanine aminopeptidase N (EC 3.4.11.2) low > 79
Dechlorosoma suillum PS 0.66 Dsui_0052 pyruvate kinase 0.50 Dsui_2287 aminopeptidase N low > 51
Variovorax sp. SCN45 0.66 GFF5504 Pyruvate kinase (EC 2.7.1.40) 0.57 GFF3118 Membrane alanine aminopeptidase N (EC 3.4.11.2) low > 127
Variovorax sp. OAS795 0.65 ABID97_RS01755 pyruvate kinase 0.57 ABID97_RS21770 aminopeptidase N low > 91
Castellaniella sp019104865 MT123 0.48 ABCV34_RS02525 pyruvate kinase 0.46 ABCV34_RS02570 aminopeptidase N low > 48
Pseudomonas putida KT2440 0.48 PP_1362 pyruvate kinase II 0.49 PP_2017 aminopeptidase N low > 96
Kangiella aquimarina DSM 16071 0.48 B158DRAFT_1404 pyruvate kinase 0.50 B158DRAFT_1479 aminopeptidase N, Escherichia coli type low > 40
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_03775 pyruvate kinase 0.49 AO353_23630 aminopeptidase low > 101
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_678 Pyruvate kinase (EC 2.7.1.40) 0.49 Pf1N1B4_4614 Membrane alanine aminopeptidase N (EC 3.4.11.2) low > 87
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_4029 pyruvate kinase 0.49 Psyr_1690 Peptidase M1, membrane alanine aminopeptidase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_4029 pyruvate kinase 0.49 Psyr_1690 Peptidase M1, membrane alanine aminopeptidase low > 86
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_17830 pyruvate kinase 0.50 AO356_24560 aminopeptidase low > 104
Pseudomonas fluorescens SBW25 0.47 PFLU_RS24255 pyruvate kinase 0.50 PFLU_RS13095 aminopeptidase N low > 109
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS24255 pyruvate kinase 0.50 PFLU_RS13095 aminopeptidase N low > 109
Pseudomonas simiae WCS417 0.47 PS417_22620 pyruvate kinase 0.49 PS417_12395 aminopeptidase N low > 88
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_5494 Pyruvate kinase (EC 2.7.1.40) 0.49 Pf6N2E2_604 Membrane alanine aminopeptidase N (EC 3.4.11.2) low > 103
Shewanella loihica PV-4 0.47 Shew_2050 pyruvate kinase (RefSeq) 0.43 Shew_1803 aminopeptidase N (RefSeq) — —
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_1813 Pyruvate kinase (EC 2.7.1.40) 0.49 PfGW456L13_3325 Membrane alanine aminopeptidase N (EC 3.4.11.2) low > 87
Pseudomonas stutzeri RCH2 0.47 Psest_3190 pyruvate kinase 0.51 Psest_1922 aminopeptidase N, Escherichia coli type low > 67
Pseudomonas sp. RS175 0.46 PFR28_03455 Pyruvate kinase II 0.49 PFR28_01574 Aminopeptidase N low > 88
Dickeya dianthicola 67-19 0.46 HGI48_RS10155 pyruvate kinase 0.45 HGI48_RS12955 aminopeptidase N low > 71
Dickeya dadantii 3937 0.46 DDA3937_RS10125 pyruvate kinase 0.46 DDA3937_RS12885 aminopeptidase N low > 74
Dickeya dianthicola ME23 0.46 DZA65_RS10570 pyruvate kinase 0.46 DZA65_RS13420 aminopeptidase N low > 75
Vibrio cholerae E7946 ATCC 55056 0.46 CSW01_10025 pyruvate kinase 0.45 CSW01_07505 aminopeptidase N low > 62
Shewanella sp. ANA-3 0.46 Shewana3_2153 pyruvate kinase (RefSeq) 0.42 Shewana3_1779 pepN aminopeptidase N (RefSeq) low > 73
Shewanella oneidensis MR-1 0.46 SO2491 pykA pyruvate kinase II (NCBI ptt file) 0.41 SO2600 pepN aminopeptidase N (NCBI ptt file) low > 76
Pectobacterium carotovorum WPP14 0.46 HER17_RS11790 pyruvate kinase 0.47 HER17_RS12010 aminopeptidase N low > 75
Escherichia fergusonii Becca 0.45 EFB2_02088 Pyruvate kinase II 0.46 EFB2_03132 Aminopeptidase N low > 86
Rahnella sp. WP5 0.45 EX31_RS10640 pyruvate kinase 0.47 EX31_RS18125 aminopeptidase N low > 89
Escherichia coli Nissle 1917 0.45 ECOLIN_RS10330 pyruvate kinase 0.46 ECOLIN_RS04935 aminopeptidase N low > 55
Shewanella amazonensis SB2B 0.45 Sama_1814 pyruvate kinase (RefSeq) 0.41 Sama_1586 pepN aminopeptidase N (RefSeq) low > 62
Escherichia coli ECOR38 0.45 HEPCGN_04725 pyk pyruvate kinase 0.46 HEPCGN_23160 pepN aminopeptidase N low > 87
Escherichia coli ECRC62 0.45 BNILDI_15630 pyk pyruvate kinase 0.46 BNILDI_20175 pepN aminopeptidase N low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_01874 Pyruvate kinase II 0.46 OHPLBJKB_02734 Aminopeptidase N low > 73
Escherichia coli BL21 0.45 ECD_01825 pyruvate kinase II 0.46 ECD_00936 aminopeptidase N low > 61
Escherichia coli ECOR27 0.45 NOLOHH_16835 pyk pyruvate kinase 0.46 NOLOHH_21920 pepN aminopeptidase N low > 75
Escherichia coli BW25113 0.45 b1854 pykA pyruvate kinase (NCBI) 0.46 b0932 pepN aminopeptidase N (NCBI) low > 76
Pseudomonas sp. S08-1 0.45 OH686_18800 pyruvate kinase 0.50 OH686_04270 aminopeptidase N low > 80
Rhodanobacter denitrificans MT42 0.45 LRK55_RS05530 pyruvate kinase 0.41 LRK55_RS09840 aminopeptidase N low > 63
Escherichia coli ECRC99 0.45 KEDOAH_01785 pyk pyruvate kinase 0.46 KEDOAH_22370 pepN aminopeptidase N — —
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS05775 pyruvate kinase 0.41 LRK54_RS10200 aminopeptidase N low > 59
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_01070 pyk pyruvate kinase 0.41 OKGIIK_13715 Aminopeptidase N low > 52
Escherichia coli ECRC102 0.45 NIAGMN_01740 pyk pyruvate kinase 0.46 NIAGMN_03085 pepN aminopeptidase N — —
Escherichia coli ECRC101 0.45 MCAODC_19085 pyk pyruvate kinase 0.46 MCAODC_24755 pepN aminopeptidase N low > 87
Escherichia coli ECRC100 0.45 OKFHMN_26320 pyk pyruvate kinase 0.46 OKFHMN_05365 pepN aminopeptidase N low > 80
Escherichia coli ECRC98 0.45 JDDGAC_00895 pyk pyruvate kinase 0.46 JDDGAC_08975 pepN aminopeptidase N low > 86
Erwinia tracheiphila SCR3 0.45 LU632_RS13370 pyk pyruvate kinase 0.45 LU632_RS09930 pepN aminopeptidase N low > 74
Pantoea sp. MT58 0.45 IAI47_08485 pyruvate kinase 0.47 IAI47_12745 aminopeptidase N low > 76
Alteromonas macleodii MIT1002 0.45 MIT1002_02409 Pyruvate kinase II 0.37 MIT1002_02028 Aminopeptidase N — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF1633 Pyruvate kinase (EC 2.7.1.40) 0.46 GFF3235 Membrane alanine aminopeptidase N (EC 3.4.11.2) low > 78
Serratia liquefaciens MT49 0.45 IAI46_14585 pyruvate kinase 0.47 IAI46_08775 aminopeptidase N low > 86
Enterobacter sp. TBS_079 0.44 MPMX20_02759 Pyruvate kinase II 0.47 MPMX20_01590 Aminopeptidase N low > 85
Enterobacter asburiae PDN3 0.44 EX28DRAFT_0702 pyruvate kinase 0.47 EX28DRAFT_2004 aminopeptidase N, Escherichia coli type low > 76
Klebsiella michiganensis M5al 0.44 BWI76_RS18115 pyruvate kinase 0.45 BWI76_RS09890 aminopeptidase N low > 92
Marinobacter adhaerens HP15 0.43 HP15_2176 pyruvate kinase II 0.49 HP15_1065 aminopeptidase N low > 73
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS18630 pyruvate kinase 0.40 ABZR86_RS15770 aminopeptidase N low > 74
Azospirillum sp. SherDot2 0.34 MPMX19_04074 Pyruvate kinase 0.52 MPMX19_04335 Aminopeptidase N low > 112
Sphingomonas koreensis DSMZ 15582 0.33 Ga0059261_0685 pyruvate kinase 0.42 Ga0059261_2024 aminopeptidase N, Escherichia coli type low > 68
Dinoroseobacter shibae DFL-12 0.32 Dshi_0228 pyruvate kinase (RefSeq) 0.43 Dshi_1223 aminopeptidase N (RefSeq) — —
Azospirillum brasilense Sp245 0.32 AZOBR_RS06845 pyruvate kinase 0.54 AZOBR_RS14865 aminopeptidase N low > 97
Phaeobacter inhibens DSM 17395 0.31 PGA1_c06970 pyruvate kinase PykA 0.40 PGA1_c09880 aminopeptidase N — —
Sinorhizobium meliloti 1021 0.31 SMc04005 pyruvate kinase 0.42 SMc02370 aminopeptidase N low > 103
Agrobacterium fabrum C58 0.30 Atu3762 pyruvate kinase 0.43 Atu0984 aminopeptidase N — —
Rhizobium sp. OAE497 0.29 ABIE40_RS16145 pyruvate kinase 0.43 ABIE40_RS05720 aminopeptidase N — —
Caulobacter crescentus NA1000 Δfur 0.28 CCNA_02130 pyruvate kinase 0.42 CCNA_02566 membrane alanine aminopeptidase low > 67
Caulobacter crescentus NA1000 0.28 CCNA_02130 pyruvate kinase 0.42 CCNA_02566 membrane alanine aminopeptidase low > 66

Not shown: 24 genomes with orthologs for HSERO_RS03350 only; 1 genomes with orthologs for HSERO_RS17720 only