Conservation of cofitness between HSERO_RS21535 and HSERO_RS03270 in Herbaspirillum seropedicae SmR1

77 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS21535 NADH dehydrogenase 1.0 HSERO_RS03270 protein RecA 0.47 4
Burkholderia phytofirmans PsJN 0.74 BPHYT_RS26840 NADH dehydrogenase 0.77 BPHYT_RS16360 recombinase RecA — —
Paraburkholderia graminis OAS925 0.74 ABIE53_005905 alkyl hydroperoxide reductase subunit F 0.78 ABIE53_003448 recombination protein RecA low > 113
Paraburkholderia bryophila 376MFSha3.1 0.74 H281DRAFT_02889 alkyl hydroperoxide reductase subunit F 0.78 H281DRAFT_04208 RecA protein — —
Paraburkholderia sabiae LMG 24235 0.74 QEN71_RS13375 alkyl hydroperoxide reductase subunit F 0.77 QEN71_RS02335 recombinase RecA — —
Ralstonia sp. UNC404CL21Col 0.72 ABZR87_RS17240 alkyl hydroperoxide reductase subunit F 0.74 ABZR87_RS07965 recombinase RecA 0.50 19
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_22810 alkyl hydroperoxide reductase subunit F 0.68 AO356_05670 recombinase RecA low > 104
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_448 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.68 Pf6N2E2_2993 RecA protein — —
Pseudomonas sp. RS175 0.71 PFR28_02481 Alkyl hydroperoxide reductase subunit F 0.68 PFR28_00472 Protein RecA low > 88
Pseudomonas fluorescens GW456-L13 0.71 PfGW456L13_2928 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.68 PfGW456L13_4668 RecA protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.71 AO353_26960 alkyl hydroperoxide reductase subunit F 0.68 AO353_16805 recombinase RecA 0.31 18
Pseudomonas simiae WCS417 0.71 PS417_14040 alkyl hydroperoxide reductase 0.68 PS417_05815 recombinase RecA low > 88
Ralstonia solanacearum IBSBF1503 0.71 RALBFv3_RS22265 alkyl hydroperoxide reductase subunit F 0.74 RALBFv3_RS12010 recombinase RecA low > 76
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_5010 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.67 Pf1N1B4_3143 RecA protein 0.38 5
Ralstonia solanacearum UW163 0.71 UW163_RS22810 alkyl hydroperoxide reductase subunit F 0.74 UW163_RS01625 recombinase RecA — —
Pseudomonas stutzeri RCH2 0.71 Psest_1134 alkyl hydroperoxide reductase, F subunit 0.70 Psest_2872 protein RecA low > 67
Ralstonia solanacearum GMI1000 0.71 RS_RS18340 alkyl hydroperoxide reductase subunit F 0.74 RS_RS02760 DNA recombination/repair protein RecA — —
Azospirillum sp. SherDot2 0.71 MPMX19_05836 Alkyl hydroperoxide reductase subunit F 0.68 MPMX19_00869 Protein RecA — —
Rhodanobacter denitrificans MT42 0.71 LRK55_RS00485 alkyl hydroperoxide reductase subunit F 0.71 LRK55_RS14695 recombinase RecA low > 63
Rhodanobacter denitrificans FW104-10B01 0.71 LRK54_RS00710 alkyl hydroperoxide reductase subunit F 0.71 LRK54_RS14980 recombinase RecA low > 59
Ralstonia solanacearum PSI07 0.70 RPSI07_RS00935 alkyl hydroperoxide reductase subunit F 0.74 RPSI07_RS21260 recombinase RecA low > 81
Rhodanobacter sp. FW510-T8 0.70 OKGIIK_06550 ahpF alkyl hydroperoxide reductase subunit F 0.71 OKGIIK_03740 recA recombinase RecA low > 52
Pseudomonas putida KT2440 0.70 PP_2440 Alkyl hydroperoxide reductase subunit F 0.68 PP_1629 Protein RecA low > 96
Castellaniella sp019104865 MT123 0.70 ABCV34_RS09915 alkyl hydroperoxide reductase subunit F 0.78 ABCV34_RS04460 recombinase RecA low > 48
Azospirillum brasilense Sp245 0.69 AZOBR_RS20515 alkyl hydroperoxide reductase subunit F 0.68 AZOBR_RS11095 recombinase RecA low > 97
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_2974 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 0.68 Psyr_1378 RecA protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_2974 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 0.68 Psyr_1378 RecA protein low > 86
Dyella japonica UNC79MFTsu3.2 0.69 ABZR86_RS08495 alkyl hydroperoxide reductase subunit F 0.68 ABZR86_RS00660 recombinase RecA low > 74
Pseudomonas fluorescens SBW25 0.69 PFLU_RS14575 alkyl hydroperoxide reductase subunit F 0.68 PFLU_RS05885 recombinase RecA low > 109
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS14575 alkyl hydroperoxide reductase subunit F 0.68 PFLU_RS05885 recombinase RecA 0.18 35
Lysobacter sp. OAE881 0.69 ABIE51_RS05480 alkyl hydroperoxide reductase subunit F 0.70 ABIE51_RS07800 recombinase RecA 0.26 58
Rhodospirillum rubrum S1H 0.68 Rru_A1417 thioredoxin-disulfide reductase (NCBI) 0.69 Rru_A2819 RecA DNA recombination protein (NCBI) — —
Pseudomonas sp. S08-1 0.68 OH686_18675 alkyl hydroperoxide reductase subunit F 0.70 OH686_18205 protein RecA low > 80
Variovorax sp. SCN45 0.67 GFF2825 Alkyl hydroperoxide reductase protein F 0.74 GFF5390 RecA protein low > 127
Dechlorosoma suillum PS 0.67 Dsui_1902 alkyl hydroperoxide reductase, F subunit 0.72 Dsui_0707 protein RecA low > 51
Xanthomonas campestris pv. campestris strain 8004 0.67 Xcc-8004.4222.1 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.70 Xcc-8004.3111.1 RecA protein — —
Acidovorax sp. GW101-3H11 0.66 Ac3H11_232 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.74 Ac3H11_1255 RecA protein — —
Brevundimonas sp. GW460-12-10-14-LB2 0.65 A4249_RS04545 alkyl hydroperoxide reductase subunit F 0.69 A4249_RS12615 recombinase RecA low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.65 GFF3915 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.74 GFF2500 RecA protein low > 90
Caulobacter crescentus NA1000 0.65 CCNA_03013 alkyl hydroperoxide reductase subunit F 0.66 CCNA_01141 RecA protein low > 66
Caulobacter crescentus NA1000 Δfur 0.65 CCNA_03013 alkyl hydroperoxide reductase subunit F 0.66 CCNA_01141 RecA protein — —
Marinobacter adhaerens HP15 0.64 HP15_3619 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 0.67 HP15_1048 recombinase A low > 73
Sphingomonas koreensis DSMZ 15582 0.63 Ga0059261_0156 alkyl hydroperoxide reductase subunit F 0.67 Ga0059261_0204 protein RecA low > 68
Shewanella oneidensis MR-1 0.62 SO0956 ahpF alkyl hydroperoxide reductase, F subunit (NCBI ptt file) 0.67 SO3430 recA recA protein (NCBI ptt file) 0.24 63
Shewanella sp. ANA-3 0.62 Shewana3_3326 FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) 0.67 Shewana3_1126 recA recombinase A (RefSeq) low > 73
Klebsiella michiganensis M5al 0.62 BWI76_RS07945 alkyl hydroperoxide reductase subunit F 0.68 BWI76_RS22180 recombinase RecA — —
Shewanella amazonensis SB2B 0.61 Sama_0618 alkyl hydroperoxide reductase, F subunit (RefSeq) 0.67 Sama_1046 recA recombinase A (RefSeq) low > 62
Enterobacter asburiae PDN3 0.60 EX28DRAFT_2349 alkyl hydroperoxide reductase subunit F 0.67 EX28DRAFT_2785 protein RecA — —
Shewanella loihica PV-4 0.60 Shew_0793 FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) 0.67 Shew_1215 recA recombinase A (RefSeq) low > 60
Escherichia coli ECRC62 0.60 BNILDI_21890 Alkyl hydroperoxide reductase subunit F 0.68 BNILDI_11105 recA recombinase RecA low > 75
Escherichia fergusonii Becca 0.60 EFB2_03485 Alkyl hydroperoxide reductase subunit F 0.68 EFB2_01225 Protein RecA low > 86
Escherichia coli ECRC100 0.60 OKFHMN_07505 Alkyl hydroperoxide reductase subunit F 0.68 OKFHMN_20705 recA recombinase RecA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_03099 Alkyl hydroperoxide reductase subunit F 0.68 OHPLBJKB_01035 Protein RecA low > 73
Escherichia coli ECRC98 0.60 JDDGAC_11150 Alkyl hydroperoxide reductase subunit F 0.68 JDDGAC_24370 recA recombinase RecA — —
Escherichia coli ECRC99 0.60 KEDOAH_20465 Alkyl hydroperoxide reductase subunit F 0.68 KEDOAH_07430 recA recombinase RecA — —
Escherichia coli ECRC101 0.60 MCAODC_26720 Alkyl hydroperoxide reductase subunit F 0.68 MCAODC_11230 recA recombinase RecA low > 87
Escherichia coli ECOR38 0.60 HEPCGN_00775 Alkyl hydroperoxide reductase subunit F 0.68 HEPCGN_19900 recA recombinase RecA low > 87
Pectobacterium carotovorum WPP14 0.60 HER17_RS02550 alkyl hydroperoxide reductase subunit F 0.69 HER17_RS05045 recombinase RecA low > 75
Escherichia coli ECOR27 0.60 NOLOHH_23880 Alkyl hydroperoxide reductase subunit F 0.68 NOLOHH_12545 recA recombinase RecA low > 75
Escherichia coli ECRC102 0.60 NIAGMN_05560 Alkyl hydroperoxide reductase subunit F 0.68 NIAGMN_18475 recA recombinase RecA — —
Escherichia coli BL21 0.60 ECD_00575 alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding 0.68 ECD_02549 DNA recombination and repair protein; ssDNA-dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP-dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor low > 61
Escherichia coli BW25113 0.60 b0606 ahpF alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides (VIMSS) 0.68 b2699 recA recombinase A (NCBI) 0.19 18
Escherichia coli Nissle 1917 0.60 ECOLIN_RS03325 alkyl hydroperoxide reductase subunit F 0.68 ECOLIN_RS15060 recombinase RecA — —
Pantoea sp. MT58 0.60 IAI47_06795 alkyl hydroperoxide reductase subunit F 0.68 IAI47_04300 recombinase RecA low > 76
Enterobacter sp. TBS_079 0.60 MPMX20_01272 Alkyl hydroperoxide reductase subunit F 0.68 MPMX20_03580 Protein RecA 0.34 19
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF4514 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.68 GFF4693 RecA protein — —
Acinetobacter radioresistens SK82 0.59 MPMX26_02042 Alkyl hydroperoxide reductase subunit F 0.69 MPMX26_01308 Protein RecA low > 36
Dickeya dianthicola 67-19 0.59 HGI48_RS02465 alkyl hydroperoxide reductase subunit F 0.68 HGI48_RS16355 recombinase RecA low > 71
Dickeya dianthicola ME23 0.59 DZA65_RS02570 alkyl hydroperoxide reductase subunit F 0.68 DZA65_RS17450 recombinase RecA — —
Dickeya dadantii 3937 0.59 DDA3937_RS02520 alkyl hydroperoxide reductase subunit F 0.69 DDA3937_RS16245 recombinase RecA low > 74
Alteromonas macleodii MIT1002 0.46 MIT1002_01785 NADH dehydrogenase 0.71 MIT1002_00955 Recombinase A low > 70
Kangiella aquimarina DSM 16071 0.43 B158DRAFT_0279 alkyl hydroperoxide reductase, F subunit 0.71 B158DRAFT_1531 protein RecA 0.38 22
Bacteroides thetaiotaomicron VPI-5482 0.42 BT2811 alkyl hydroperoxide reductase subunit F (NCBI ptt file) 0.61 BT4610 RecA (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.42 BACOVA_02067 alkyl hydroperoxide reductase, F subunit 0.61 BACOVA_05402 RecA protein low > 94
Parabacteroides merdae CL09T00C40 0.40 HMPREF1078_RS04200 alkyl hydroperoxide reductase subunit F 0.61 HMPREF1078_RS00095 recombinase RecA low > 61
Bacteroides stercoris CC31F 0.40 HMPREF1181_RS02150 alkyl hydroperoxide reductase subunit F 0.61 HMPREF1181_RS11910 recombinase RecA low > 56
Phocaeicola dorei CL03T12C01 0.40 ABI39_RS03990 alkyl hydroperoxide reductase subunit F 0.62 ABI39_RS11930 recombinase RecA low > 72
Phocaeicola vulgatus CL09T03C04 0.39 HMPREF1058_RS09535 alkyl hydroperoxide reductase subunit F 0.62 HMPREF1058_RS15965 recombinase RecA low > 67

Not shown: 0 genomes with orthologs for HSERO_RS21535 only; 23 genomes with orthologs for HSERO_RS03270 only