Conservation of cofitness between HER17_RS14920 and HER17_RS07155 in Pectobacterium carotovorum WPP14

83 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS14920 ADP-forming succinate--CoA ligase subunit beta 1.0 HER17_RS07155 NADH-quinone oxidoreductase subunit NuoH 0.57 18
Dickeya dadantii 3937 0.93 DDA3937_RS06470 ADP-forming succinate--CoA ligase subunit beta 0.87 DDA3937_RS14305 NADH-quinone oxidoreductase subunit NuoH
Dickeya dianthicola 67-19 0.92 HGI48_RS06510 ADP-forming succinate--CoA ligase subunit beta 0.87 HGI48_RS14280 NADH-quinone oxidoreductase subunit NuoH low > 71
Dickeya dianthicola ME23 0.92 DZA65_RS06855 ADP-forming succinate--CoA ligase subunit beta 0.87 DZA65_RS14955 NADH-quinone oxidoreductase subunit NuoH
Serratia liquefaciens MT49 0.91 IAI46_06285 ADP-forming succinate--CoA ligase subunit beta 0.88 IAI46_17680 NADH-quinone oxidoreductase subunit NuoH 0.40 43
Pantoea sp. MT58 0.91 IAI47_13735 ADP-forming succinate--CoA ligase subunit beta 0.85 IAI47_06390 NADH-quinone oxidoreductase subunit NuoH
Erwinia tracheiphila SCR3 0.90 LU632_RS16085 sucC ADP-forming succinate--CoA ligase subunit beta 0.85 LU632_RS07995 nuoH NADH-quinone oxidoreductase subunit NuoH
Klebsiella michiganensis M5al 0.90 BWI76_RS08425 succinyl-CoA ligase subunit beta 0.91 BWI76_RS20160 NADH-quinone oxidoreductase subunit H 0.49 30
Escherichia coli Nissle 1917 0.90 ECOLIN_RS03880 ADP-forming succinate--CoA ligase subunit beta 0.92 ECOLIN_RS13255 NADH-quinone oxidoreductase subunit NuoH
Escherichia coli ECOR27 0.90 NOLOHH_23305 sucC ADP-forming succinate--CoA ligase subunit beta 0.91 NOLOHH_14490 nuoH NADH-quinone oxidoreductase subunit NuoH 0.71 18
Escherichia coli BW25113 0.90 b0728 sucC succinyl-CoA synthetase subunit beta (NCBI) 0.91 b2282 nuoH NADH dehydrogenase subunit H (NCBI) 0.36 20
Escherichia coli ECRC101 0.90 MCAODC_26135 sucC ADP-forming succinate--CoA ligase subunit beta 0.91 MCAODC_13910 nuoH NADH-quinone oxidoreductase subunit NuoH 0.68 25
Escherichia coli ECOR38 0.90 HEPCGN_01315 sucC ADP-forming succinate--CoA ligase subunit beta 0.92 HEPCGN_22075 nuoH NADH-quinone oxidoreductase subunit NuoH low > 87
Escherichia coli ECRC100 0.90 OKFHMN_06915 sucC ADP-forming succinate--CoA ligase subunit beta 0.91 OKFHMN_22870 nuoH NADH-quinone oxidoreductase subunit NuoH low > 80
Escherichia coli ECRC102 0.90 NIAGMN_04965 sucC ADP-forming succinate--CoA ligase subunit beta 0.91 NIAGMN_20640 nuoH NADH-quinone oxidoreductase subunit NuoH
Escherichia coli BL21 0.90 ECD_00687 succinyl-CoA synthetase, beta subunit 0.91 ECD_02207 NADH:ubiquinone oxidoreductase, membrane subunit H 0.46 31
Escherichia coli ECRC98 0.90 JDDGAC_10570 sucC ADP-forming succinate--CoA ligase subunit beta 0.91 JDDGAC_26835 nuoH NADH-quinone oxidoreductase subunit NuoH low > 86
Escherichia coli ECRC62 0.90 BNILDI_21300 sucC ADP-forming succinate--CoA ligase subunit beta 0.91 BNILDI_13410 nuoH NADH-quinone oxidoreductase subunit NuoH 0.87 5
Escherichia coli HS(pFamp)R (ATCC 700891) 0.90 OHPLBJKB_02989 Succinate--CoA ligase [ADP-forming] subunit beta 0.91 OHPLBJKB_01424 NADH-quinone oxidoreductase subunit H 0.41 26
Escherichia fergusonii Becca 0.90 EFB2_03378 Succinate--CoA ligase [ADP-forming] subunit beta 0.91 EFB2_01577 NADH-quinone oxidoreductase subunit H low > 86
Escherichia coli ECRC99 0.90 KEDOAH_21050 sucC ADP-forming succinate--CoA ligase subunit beta 0.91 KEDOAH_05325 nuoH NADH-quinone oxidoreductase subunit NuoH
Rahnella sp. WP5 0.89 EX31_RS23450 ADP-forming succinate--CoA ligase subunit beta 0.87 EX31_RS19405 NADH-quinone oxidoreductase subunit NuoH low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.89 GFF4641 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.92 GFF1885 NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) 0.63 17
Enterobacter sp. TBS_079 0.88 MPMX20_01356 Succinate--CoA ligase [ADP-forming] subunit beta 0.91 MPMX20_03212 NADH-quinone oxidoreductase subunit H 0.69 15
Enterobacter asburiae PDN3 0.88 EX28DRAFT_2264 succinyl-CoA synthetase, beta subunit 0.91 EX28DRAFT_0328 NADH:ubiquinone oxidoreductase subunit 1 (chain H) 0.61 39
Pseudomonas sp. S08-1 0.78 OH686_01955 Succinyl-CoA ligase [ADP-forming] beta chain 0.73 OH686_00125 NADH-ubiquinone oxidoreductase chain H
Pseudomonas fluorescens SBW25-INTG 0.77 PFLU_RS08970 ADP-forming succinate--CoA ligase subunit beta 0.76 PFLU_RS18645 NADH-quinone oxidoreductase subunit NuoH
Pseudomonas fluorescens SBW25 0.77 PFLU_RS08970 ADP-forming succinate--CoA ligase subunit beta 0.76 PFLU_RS18645 NADH-quinone oxidoreductase subunit NuoH
Pseudomonas fluorescens GW456-L13 0.77 PfGW456L13_4266 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.75 PfGW456L13_2627 NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
Pseudomonas fluorescens FW300-N2E3 0.77 AO353_01820 succinyl-CoA synthetase subunit beta 0.78 AO353_27770 NADH:ubiquinone oxidoreductase
Pseudomonas sp. RS175 0.77 PFR28_03093 Succinate--CoA ligase [ADP-forming] subunit beta 0.78 PFR28_02633 NADH-quinone oxidoreductase subunit H
Pseudomonas fluorescens FW300-N2E2 0.77 Pf6N2E2_5858 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.77 Pf6N2E2_271 NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
Pseudomonas simiae WCS417 0.77 PS417_08910 succinyl-CoA synthetase subunit beta 0.76 PS417_16605 NADH:ubiquinone oxidoreductase
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_3684 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.77 Pf1N1B4_4034 NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_19710 succinyl-CoA synthetase subunit beta 0.77 AO356_22040 NADH:ubiquinone oxidoreductase
Pseudomonas syringae pv. syringae B728a 0.76 Psyr_2012 succinyl-CoA synthetase (ADP-forming) beta subunit 0.74 Psyr_3203 NADH dehydrogenase subunit H
Pseudomonas syringae pv. syringae B728a ΔmexB 0.76 Psyr_2012 succinyl-CoA synthetase (ADP-forming) beta subunit 0.74 Psyr_3203 NADH dehydrogenase subunit H
Shewanella oneidensis MR-1 0.75 SO1932 sucC succinyl-CoA synthase, beta subunit (NCBI ptt file) 0.76 SO1015 nuoH NADH dehydrogenase I, H subunit (NCBI ptt file)
Pseudomonas putida KT2440 0.74 PP_4186 succinyl-CoA synthetase, beta subunit glutaryl-CoA synthetase, beta subunit 0.75 PP_4125 NADH-quinone oxidoreductase subunit H
Kangiella aquimarina DSM 16071 0.73 B158DRAFT_1426 succinyl-CoA synthetase, beta subunit 0.38 B158DRAFT_0120 NADH dehydrogenase subunit H (EC 1.6.5.3)
Acinetobacter radioresistens SK82 0.63 MPMX26_00754 Succinate--CoA ligase [ADP-forming] subunit beta 0.67 MPMX26_02549 NADH-quinone oxidoreductase subunit H
Lysobacter sp. OAE881 0.59 ABIE51_RS04860 ADP-forming succinate--CoA ligase subunit beta 0.31 ABIE51_RS08345 NADH-quinone oxidoreductase subunit NuoH
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS11025 ADP-forming succinate--CoA ligase subunit beta 0.31 ABZR86_RS06080 NADH-quinone oxidoreductase subunit NuoH
Rhodanobacter sp. FW510-T8 0.58 OKGIIK_01760 sucC ADP-forming succinate--CoA ligase subunit beta 0.34 OKGIIK_05800 nuoH NADH-quinone oxidoreductase subunit NuoH
Xanthomonas campestris pv. campestris strain 8004 0.57 Xcc-8004.1355.1 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.35 Xcc-8004.1990.1 NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
Rhodanobacter denitrificans FW104-10B01 0.57 LRK54_RS04985 ADP-forming succinate--CoA ligase subunit beta 0.35 LRK54_RS01095 NADH-quinone oxidoreductase subunit NuoH
Rhodanobacter denitrificans MT42 0.57 LRK55_RS04765 ADP-forming succinate--CoA ligase subunit beta 0.35 LRK55_RS00870 NADH-quinone oxidoreductase subunit NuoH
Dinoroseobacter shibae DFL-12 0.56 Dshi_2878 succinyl-CoA synthetase, beta subunit (RefSeq) 0.33 Dshi_1321 NADH dehydrogenase (quinone) (RefSeq)
Azospirillum sp. SherDot2 0.55 MPMX19_00106 Succinate--CoA ligase [ADP-forming] subunit beta 0.40 MPMX19_01739 NADH-quinone oxidoreductase subunit H
Azospirillum brasilense Sp245 0.55 AZOBR_RS14065 malate--CoA ligase subunit beta 0.40 AZOBR_RS07200 NADH:ubiquinone oxidoreductase subunit H
Paraburkholderia sabiae LMG 24235 0.54 QEN71_RS20405 ADP-forming succinate--CoA ligase subunit beta 0.36 QEN71_RS24115 NADH-quinone oxidoreductase subunit NuoH
Caulobacter crescentus NA1000 0.54 CCNA_00340 succinyl-CoA synthetase beta chain 0.34 CCNA_02022 NADH-quinone oxidoreductase chain H
Caulobacter crescentus NA1000 Δfur 0.54 CCNA_00340 succinyl-CoA synthetase beta chain 0.34 CCNA_02022 NADH-quinone oxidoreductase chain H
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS31375 succinyl-CoA synthetase subunit beta 0.36 RR42_RS05545 NADH:ubiquinone oxidoreductase subunit H
Magnetospirillum magneticum AMB-1 0.54 AMB_RS20030 succinyl-CoA ligase subunit beta 0.43 AMB_RS13975 NADH-quinone oxidoreductase subunit H
Phaeobacter inhibens DSM 17395 0.53 PGA1_c03630 succinyl-CoA ligase [ADP-forming] subunit beta 0.34 PGA1_c10480 NADH-quinone oxidoreductase subunit H
Rhodospirillum rubrum S1H 0.53 Rru_A1211 Succinyl-CoA synthetase, beta subunit (NCBI) 0.41 Rru_A1562 Respiratory-chain NADH dehydrogenase, subunit 1 (NCBI)
Rhodopseudomonas palustris CGA009 0.53 TX73_000990 ADP-forming succinate--CoA ligase subunit beta 0.45 TX73_022060 NADH-quinone oxidoreductase subunit NuoH
Sphingomonas koreensis DSMZ 15582 0.52 Ga0059261_2278 succinyl-CoA synthetase, beta subunit 0.33 Ga0059261_0702 NADH dehydrogenase subunit H (EC 1.6.5.3)
Bosea sp. OAE506 0.52 ABIE41_RS08965 ADP-forming succinate--CoA ligase subunit beta 0.37 ABIE41_RS17915 NADH-quinone oxidoreductase subunit NuoH
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_04205 succinyl-CoA synthetase (ADP-forming) beta subunit 0.37 H281DRAFT_04574 NADH dehydrogenase subunit H
Sinorhizobium meliloti 1021 0.49 SMc02480 succinyl-CoA synthetase subunit beta 0.38 SMa1516 NuoH2 NADH:ubiquinone oxidoreductase subunit 1 (chain H)
Acidovorax sp. GW101-3H11 0.49 Ac3H11_1252 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.38 Ac3H11_1445 NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS16345 succinyl-CoA ligase [ADP-forming] subunit beta 0.37 BPHYT_RS06660 NADH-quinone oxidoreductase subunit H
Paraburkholderia graminis OAS925 0.49 ABIE53_003445 succinyl-CoA synthetase beta subunit 0.37 ABIE53_001597 NADH-quinone oxidoreductase subunit H
Variovorax sp. OAS795 0.49 ABID97_RS24475 ADP-forming succinate--CoA ligase subunit beta 0.38 ABID97_RS20460 NADH-quinone oxidoreductase subunit NuoH
Ralstonia solanacearum UW163 0.48 UW163_RS01610 ADP-forming succinate--CoA ligase subunit beta 0.38 UW163_RS10785 NADH-quinone oxidoreductase subunit H
Ralstonia solanacearum GMI1000 0.48 RS_RS02775 succinyl-CoA ligase subunit beta 0.38 RS_RS10310 NADH-quinone oxidoreductase subunit H
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS12025 ADP-forming succinate--CoA ligase subunit beta 0.38 RALBFv3_RS02940 NADH-quinone oxidoreductase subunit H
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF2504 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.38 GFF3688 NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
Variovorax sp. SCN45 0.48 GFF5405 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.37 GFF4757 NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
Brevundimonas sp. GW460-12-10-14-LB2 0.48 A4249_RS14420 ADP-forming succinate--CoA ligase subunit beta 0.37 A4249_RS06375 NADH-quinone oxidoreductase subunit NuoH
Ralstonia solanacearum PSI07 0.48 RPSI07_RS21245 ADP-forming succinate--CoA ligase subunit beta 0.38 RPSI07_RS14370 NADH-quinone oxidoreductase subunit NuoH
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS07980 ADP-forming succinate--CoA ligase subunit beta 0.39 ABZR87_RS14845 NADH-quinone oxidoreductase subunit NuoH
Rhizobium sp. OAE497 0.48 ABIE40_RS17995 ADP-forming succinate--CoA ligase subunit beta 0.34 ABIE40_RS07220 NADH-quinone oxidoreductase subunit NuoH
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS03280 malate--CoA ligase subunit beta 0.42 HSERO_RS08855 NADH:ubiquinone oxidoreductase subunit H
Agrobacterium fabrum C58 0.47 Atu2638 succinyl-CoA synthetase beta chain 0.35 Atu1277 NADH ubiquinone oxidoreductase I chain H
Dechlorosoma suillum PS 0.47 Dsui_1445 succinyl-CoA synthetase, beta subunit 0.35 Dsui_3043 NADH:ubiquinone oxidoreductase subunit 1 (chain H)
Castellaniella sp019104865 MT123 0.47 ABCV34_RS04435 ADP-forming succinate--CoA ligase subunit beta 0.38 ABCV34_RS08715 NADH-quinone oxidoreductase subunit NuoH
Bacteroides thetaiotaomicron VPI-5482 0.44 BT0788 succinyl-CoA synthetase beta chain (NCBI ptt file) 0.36 BT4064 NADH dehydrogenase I, chain H (NCBI ptt file) low > 81
Pontibacter actiniarum KMM 6156, DSM 19842 0.44 CA264_10470 succinate--CoA ligase subunit beta 0.55 CA264_04240 NADH-quinone oxidoreductase subunit H
Bacteroides ovatus ATCC 8483 0.44 BACOVA_02527 succinate-CoA ligase, beta subunit 0.36 BACOVA_04859 NADH dehydrogenase low > 94
Pedobacter sp. GW460-11-11-14-LB5 0.43 CA265_RS04300 succinate--CoA ligase subunit beta 0.35 CA265_RS23570 NADH-quinone oxidoreductase subunit H
Mucilaginibacter yixingensis YX-36 DSM 26809 0.43 ABZR88_RS07630 ADP-forming succinate--CoA ligase subunit beta 0.35 ABZR88_RS17135 NADH-quinone oxidoreductase subunit NuoH

Not shown: 12 genomes with orthologs for HER17_RS14920 only; 6 genomes with orthologs for HER17_RS07155 only