| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_1861 | | type I secretion membrane fusion protein, HlyD family | 1.0 | Psest_0711 | | ATP-dependent chaperone ClpB | 0.19 | 8 |
| Pseudomonas sp. S08-1 | 0.76 | OH686_20620 | | Type I secretion membrane fusion protein, HlyD family | 0.91 | OH686_16420 | | ATP-dependent chaperone protein ClpB | low | > 80 |
| Pseudomonas sp. RS175 | 0.73 | PFR28_00781 | | Type I secretion system membrane fusion protein PrsE | 0.90 | PFR28_03746 | | Chaperone protein ClpB | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.73 | Pf6N2E2_2652 | | HlyD family secretion protein | 0.90 | Pf6N2E2_5129 | | ClpB protein | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.73 | AO356_04080 | | hemolysin secretion protein D | 0.90 | AO356_15935 | | ATP-dependent chaperone ClpB | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.72 | Pf1N1B4_522 | | HlyD family secretion protein | 0.89 | Pf1N1B4_2824 | | ClpB protein | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.71 | PfGW456L13_4432 | | HlyD family secretion protein | 0.90 | PfGW456L13_1495 | | ClpB protein | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.60 | AO353_11195 | | hemolysin secretion protein D | 0.89 | AO353_14230 | | ATP-dependent chaperone ClpB | low | > 101 |
| Pectobacterium carotovorum WPP14 | 0.58 | HER17_RS05855 | | HlyD family type I secretion periplasmic adaptor subunit | 0.71 | HER17_RS05410 | | ATP-dependent chaperone ClpB | low | > 75 |
| Pseudomonas putida KT2440 | 0.57 | PP_0166 | | HlyD family secretion protein | 0.89 | PP_0625 | | Chaperone protein ClpB | low | > 96 |
| Desulfovibrio vulgaris Miyazaki F | 0.43 | DvMF_1159 | | type I secretion membrane fusion protein, HlyD family (RefSeq) | 0.56 | DvMF_0567 | | ATP-dependent chaperone ClpB (RefSeq) | low | > 51 |
| Shewanella loihica PV-4 | 0.42 | Shew_0311 | | HlyD family type I secretion membrane fusion protein (RefSeq) | 0.71 | Shew_2948 | | ATPase (RefSeq) | low | > 60 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.42 | DVU1018 | rtxD | type I secretion membrane fusion protein, HlyD family (TIGR) | 0.56 | DVU1874 | clpB | ATP-dependent Clp protease, ATP-binding subunit ClpB (TIGR) | low | > 55 |
| Vibrio cholerae E7946 ATCC 55056 | 0.40 | CSW01_19480 | | HlyD family type I secretion periplasmic adaptor subunit | 0.71 | CSW01_03705 | | chaperone protein ClpB | low | > 62 |
| Shewanella amazonensis SB2B | 0.39 | Sama_3260 | | HlyD family secretion protein (RefSeq) | 0.71 | Sama_2603 | | clpB protein (RefSeq) | low | > 62 |
| Shewanella sp. ANA-3 | 0.39 | Shewana3_0380 | | HlyD family type I secretion membrane fusion protein (RefSeq) | 0.71 | Shewana3_3169 | | ATPase (RefSeq) | low | > 73 |
| Acidovorax sp. GW101-3H11 | 0.39 | Ac3H11_2110 | | Type I secretion system, membrane fusion protein LapC | 0.64 | Ac3H11_1474 | | ClpB protein | low | > 79 |
| Shewanella oneidensis MR-1 | 0.39 | SO4319 | | HlyD family secretion protein (NCBI ptt file) | 0.71 | SO3577 | clpB | clpB protein (NCBI ptt file) | low | > 76 |
| Pantoea sp. MT58 | 0.33 | IAI47_06510 | | HlyD family efflux transporter periplasmic adaptor subunit | 0.71 | IAI47_04435 | | ATP-dependent chaperone ClpB | low | > 76 |
| Rahnella sp. WP5 | 0.32 | EX31_RS19255 | | HlyD family efflux transporter periplasmic adaptor subunit | 0.69 | EX31_RS07560 | | ATP-dependent chaperone ClpB | low | > 89 |
| Rhizobium sp. OAE497 | 0.32 | ABIE40_RS22050 | | HlyD family type I secretion periplasmic adaptor subunit | 0.59 | ABIE40_RS17260 | | ATP-dependent chaperone ClpB | low | > 107 |
| Enterobacter asburiae PDN3 | 0.32 | EX28DRAFT_2734 | | Multidrug resistance efflux pump | 0.72 | EX28DRAFT_2693 | | ATP-dependent chaperone ClpB | low | > 76 |
| Enterobacter sp. TBS_079 | 0.31 | MPMX20_03525 | | Type I secretion system membrane fusion protein PrsE | 0.72 | MPMX20_03461 | | Chaperone protein ClpB | low | > 85 |
| Variovorax sp. SCN45 | 0.31 | GFF5852 | | Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC | 0.64 | GFF2792 | | Chaperone protein ClpB (ATP-dependent unfoldase) | low | > 127 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.30 | GFF4153 | | Type I secretion system, membrane fusion protein LapC | 0.72 | GFF4184 | | ClpB protein | low | > 78 |
| Klebsiella michiganensis M5al | 0.30 | BWI76_RS10025 | | secretion protein HlyD | 0.71 | BWI76_RS21440 | | ATP-dependent chaperone ClpB | 0.21 | 39 |
| Sphingomonas koreensis DSMZ 15582 | 0.30 | Ga0059261_0542 | | type I secretion membrane fusion protein, HlyD family | 0.60 | Ga0059261_1434 | | ATP-dependent chaperone ClpB | low | > 68 |
| Acinetobacter radioresistens SK82 | 0.30 | MPMX26_01961 | | Type I secretion system membrane fusion protein PrsE | 0.68 | MPMX26_01096 | | Chaperone protein ClpB | — | — |
| Escherichia coli ECRC101 | 0.30 | MCAODC_27255 | emrA | hemolysin D | 0.72 | MCAODC_11795 | clpB | ATP-dependent chaperone ClpB | low | > 87 |
| Escherichia coli ECRC102 | 0.30 | NIAGMN_06090 | emrA | hemolysin D | 0.72 | NIAGMN_19035 | clpB | ATP-dependent chaperone ClpB | — | — |
| Escherichia coli ECRC98 | 0.30 | JDDGAC_11685 | emrA | hemolysin D | 0.72 | JDDGAC_24930 | clpB | ATP-dependent chaperone ClpB | low | > 86 |
| Escherichia coli ECOR38 | 0.30 | HEPCGN_06675 | emrA | hemolysin D | 0.72 | HEPCGN_20390 | clpB | ATP-dependent chaperone ClpB | low | > 87 |
| Escherichia coli ECRC100 | 0.30 | OKFHMN_08040 | emrA | hemolysin D | 0.72 | OKFHMN_21265 | clpB | ATP-dependent chaperone ClpB | low | > 80 |
| Escherichia coli ECRC99 | 0.30 | KEDOAH_19930 | emrA | hemolysin D | 0.72 | KEDOAH_06955 | clpB | ATP-dependent chaperone ClpB | — | — |
| Herbaspirillum seropedicae SmR1 | 0.28 | HSERO_RS09005 | | type I secretion protein HlyD | 0.66 | HSERO_RS10545 | | protein disaggregation chaperone | 0.31 | 63 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.28 | GFF2375 | | Type I secretion system, membrane fusion protein LapC | 0.64 | GFF3942 | | ClpB protein | low | > 90 |
| Escherichia coli Nissle 1917 | 0.27 | ECOLIN_RS01695 | | HlyD family type I secretion periplasmic adaptor subunit | 0.72 | ECOLIN_RS14665 | | ATP-dependent chaperone ClpB | — | — |
| Ralstonia solanacearum GMI1000 | 0.26 | RS_RS22840 | | secretion protein HlyD | 0.66 | RS_RS06695 | | chaperone protein ClpB | low | > 80 |
| Phaeobacter inhibens DSM 17395 | 0.25 | PGA1_c02430 | | type I secretion membrane fusion protein, HlyD family | 0.57 | PGA1_c32440 | | chaperone protein ClpB | low | > 62 |
| Dinoroseobacter shibae DFL-12 | 0.24 | Dshi_2502 | | type I secretion membrane fusion protein, HlyD family (RefSeq) | 0.58 | Dshi_0617 | | ATPase AAA-2 domain protein (RefSeq) | low | > 64 |
| Azospirillum sp. SherDot2 | 0.23 | MPMX19_04860 | | Type I secretion system membrane fusion protein PrsE | 0.61 | MPMX19_02442 | | Chaperone protein ClpB | low | > 112 |
| Variovorax sp. OAS795 | 0.22 | ABID97_RS24340 | | HlyD family type I secretion periplasmic adaptor subunit | 0.64 | ABID97_RS10930 | | ATP-dependent chaperone ClpB | low | > 91 |
| Azospirillum brasilense Sp245 | 0.20 | AZOBR_RS18215 | | hypothetical protein | 0.61 | AZOBR_RS18950 | | ATPase AAA | low | > 97 |
| Rhodospirillum rubrum S1H | 0.20 | Rru_B0040 | | Type I secretion membrane fusion protein, HlyD (NCBI) | 0.59 | Rru_A0753 | | Chaperone clpB (NCBI) | low | > 58 |
| Agrobacterium fabrum C58 | 0.18 | Atu4414 | | bacteriocin ABC transporter permease | 0.58 | Atu4177 | | ATP-dependent Clp protease, ATP-binding subunit | low | > 89 |
| Caulobacter crescentus NA1000 | 0.18 | CCNA_01061 | | type I secretion adaptor protein RsaE | 0.57 | CCNA_00922 | | ClpB protein | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.18 | CCNA_01061 | | type I secretion adaptor protein RsaE | 0.57 | CCNA_00922 | | ClpB protein | low | > 67 |
| Dechlorosoma suillum PS | 0.18 | Dsui_1775 | | type I secretion membrane fusion protein, HlyD family | 0.68 | Dsui_2161 | | ATP-dependent chaperone ClpB | low | > 51 |
| Pseudomonas syringae pv. syringae B728a | 0.18 | Psyr_0934 | | Type I secretion membrane fusion protein, HlyD | 0.89 | Psyr_0728 | | AAA ATPase, central region:Clp, N terminal:Clp, N terminal | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.18 | Psyr_0934 | | Type I secretion membrane fusion protein, HlyD | 0.89 | Psyr_0728 | | AAA ATPase, central region:Clp, N terminal:Clp, N terminal | low | > 86 |
| Sinorhizobium meliloti 1021 | 0.18 | SMc04208 | | toxin secretion transmembrane protein | 0.58 | SMc02433 | | ATP-dependent protease | low | > 103 |
| Ralstonia solanacearum IBSBF1503 | 0.17 | RALBFv3_RS20765 | | HlyD family type I secretion periplasmic adaptor subunit | 0.67 | RALBFv3_RS00030 | | ATP-dependent chaperone ClpB | low | > 76 |
| Pseudomonas simiae WCS417 | 0.16 | PS417_24395 | | hemolysin D | 0.90 | PS417_03830 | | protein disaggregation chaperone | low | > 88 |
| Rhodanobacter sp. FW510-T8 | 0.16 | OKGIIK_05225 | | Membrane fusion protein (MFP) family protein | 0.71 | OKGIIK_01800 | clpB | ATP-dependent chaperone ClpB | low | > 52 |
| Pseudomonas fluorescens SBW25 | 0.16 | PFLU_RS26325 | | HlyD family type I secretion periplasmic adaptor subunit | 0.91 | PFLU_RS03880 | | ATP-dependent chaperone ClpB | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.16 | PFLU_RS26325 | | HlyD family type I secretion periplasmic adaptor subunit | 0.91 | PFLU_RS03880 | | ATP-dependent chaperone ClpB | low | > 109 |
| Bosea sp. OAE506 | 0.16 | ABIE41_RS08105 | | HlyD family type I secretion periplasmic adaptor subunit | 0.58 | ABIE41_RS23785 | | ATP-dependent chaperone ClpB | low | > 77 |
| Escherichia fergusonii Becca | 0.15 | EFB2_00100 | | Hemolysin secretion protein D, chromosomal | 0.72 | EFB2_01298 | | Chaperone protein ClpB | low | > 86 |
| Ralstonia solanacearum PSI07 | 0.15 | RPSI07_RS01225 | | HlyD family type I secretion periplasmic adaptor subunit | 0.66 | RPSI07_RS17450 | | ATP-dependent chaperone ClpB | low | > 81 |
| Paraburkholderia graminis OAS925 | 0.14 | ABIE53_004978 | | hemolysin D | 0.68 | ABIE53_002033 | | ATP-dependent Clp protease ATP-binding subunit ClpB | low | > 113 |
| Ralstonia solanacearum UW163 | 0.14 | UW163_RS22520 | | HlyD family type I secretion periplasmic adaptor subunit | 0.67 | UW163_RS13360 | | ATP-dependent chaperone ClpB | — | — |
| Synechococcus elongatus PCC 7942 | 0.14 | Synpcc7942_1904 | hlyD | hemolysin secretion protein-like | 0.57 | Synpcc7942_1089 | clpB | ATPase | low | > 38 |
| Serratia liquefaciens MT49 | 0.13 | IAI46_08100 | | HlyD family type I secretion periplasmic adaptor subunit | 0.70 | IAI46_03995 | | ATP-dependent chaperone ClpB | low | > 86 |
| Phocaeicola dorei CL03T12C01 | 0.10 | ABI39_RS05830 | | HlyD family efflux transporter periplasmic adaptor subunit | 0.53 | ABI39_RS18885 | | ATP-dependent chaperone ClpB | low | > 72 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.10 | H281DRAFT_03780 | | HlyD family secretion protein | 0.68 | H281DRAFT_00817 | | ATP-dependent Clp protease ATP-binding subunit ClpB | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.09 | BPHYT_RS19915 | | hemolysin D | 0.68 | BPHYT_RS08990 | | protein disaggregation chaperone | low | > 109 |
| Paraburkholderia sabiae LMG 24235 | 0.09 | QEN71_RS14530 | | HlyD family efflux transporter periplasmic adaptor subunit | 0.68 | QEN71_RS22370 | | ATP-dependent chaperone ClpB | low | > 153 |
| Rhodanobacter denitrificans FW104-10B01 | 0.08 | LRK54_RS12680 | | HlyD family secretion protein | 0.72 | LRK54_RS04955 | | ATP-dependent chaperone ClpB | low | > 59 |
| Dyella japonica UNC79MFTsu3.2 | 0.08 | ABZR86_RS19535 | | HlyD family efflux transporter periplasmic adaptor subunit | 0.73 | ABZR86_RS10940 | | ATP-dependent chaperone ClpB | low | > 74 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.06 | CA265_RS04020 | | hypothetical protein | 0.51 | CA265_RS12775 | | ATP-dependent chaperone ClpB | low | > 88 |