Conservation of cofitness between PS417_20040 and PS417_20050 in Pseudomonas simiae WCS417

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_20040 cobyric acid synthase 1.0 PS417_20050 cobalamin biosynthesis protein CobD 0.46 6
Pseudomonas fluorescens SBW25-INTG 0.92 PFLU_RS22005 cobyric acid synthase 0.98 PFLU_RS22015 cobalamin biosynthesis protein 0.82 6
Pseudomonas fluorescens SBW25 0.92 PFLU_RS22005 cobyric acid synthase 0.98 PFLU_RS22015 cobalamin biosynthesis protein 0.81 22
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_5742 Cobyric acid synthase (EC 6.3.5.10) 0.90 Pf6N2E2_5740 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) 0.62 9
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_3711 Cobyric acid synthase (EC 6.3.5.10) 0.93 Pf1N1B4_3709 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) 0.46 18
Pseudomonas syringae pv. syringae B728a 0.87 Psyr_3676 adenosylcobyric acid synthase (glutamine-hydrolysing) 0.90 Psyr_3678 adenosylcobinamide-phosphate synthase 0.55 7
Pseudomonas syringae pv. syringae B728a ΔmexB 0.87 Psyr_3676 adenosylcobyric acid synthase (glutamine-hydrolysing) 0.90 Psyr_3678 adenosylcobinamide-phosphate synthase low > 86
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_4238 Cobyric acid synthase (EC 6.3.5.10) 0.91 PfGW456L13_4240 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) 0.60 7
Pseudomonas fluorescens FW300-N2E3 0.87 AO353_02615 cobyric acid synthase 0.92 AO353_02625 cobalamin biosynthesis protein CobD 0.81 7
Pseudomonas sp. RS175 0.86 PFR28_03204 Cobyric acid synthase 0.84 PFR28_03206 Cobalamin biosynthesis protein CobD 0.74 4
Pseudomonas fluorescens FW300-N2C3 0.84 AO356_19160 cobyric acid synthase 0.85 AO356_19150 cobalamin biosynthesis protein CobD 0.74 4
Pseudomonas putida KT2440 0.84 PP_1677 Adenosyl-cobyric acid synthase 0.84 PP_1675 Subunit of adenosylcobinamide-phosphate synthase beta component 0.72 4
Pseudomonas stutzeri RCH2 0.80 Psest_3008 cobyric acid synthase CobQ 0.65 Psest_3010 cobalamin biosynthesis protein CobD 0.16 33
Pseudomonas sp. S08-1 0.80 OH686_04965 cobyric acid synthase CobQ 0.70 OH686_04975 cobalamin biosynthesis protein CobD low > 80
Lysobacter sp. OAE881 0.69 ABIE51_RS04965 cobyric acid synthase 0.53 ABIE51_RS04955 adenosylcobinamide-phosphate synthase CbiB low > 62
Cupriavidus basilensis FW507-4G11 0.68 RR42_RS16075 cobyric acid synthase 0.41 RR42_RS16085 cobalamin biosynthesis protein CobD low > 128
Ralstonia sp. UNC404CL21Col 0.68 ABZR87_RS00040 cobyric acid synthase 0.49 ABZR87_RS00050 adenosylcobinamide-phosphate synthase CbiB low > 80
Dyella japonica UNC79MFTsu3.2 0.68 ABZR86_RS10900 cobyric acid synthase 0.52 ABZR86_RS10910 adenosylcobinamide-phosphate synthase CbiB low > 74
Rhodanobacter sp. FW510-T8 0.68 OKGIIK_05500 cobyric acid synthase 0.52 OKGIIK_05490 cbiB adenosylcobinamide-phosphate synthase CbiB low > 52
Ralstonia solanacearum GMI1000 0.68 RS_RS12000 cobyric acid synthase 0.47 RS_RS12010 cobalamin biosynthesis protein low > 80
Ralstonia solanacearum UW163 0.68 UW163_RS09225 cobyric acid synthase 0.48 UW163_RS09215 cobalamin biosynthesis protein — —
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS04445 cobyric acid synthase 0.48 RALBFv3_RS04455 cobalamin biosynthesis protein 0.56 5
Ralstonia solanacearum PSI07 0.67 RPSI07_RS12925 cobyric acid synthase 0.50 RPSI07_RS12915 cobalamin biosynthesis protein low > 81
Vibrio cholerae E7946 ATCC 55056 0.63 CSW01_17810 cobyric acid synthase CobQ 0.15 CSW01_12050 adenosylcobinamide-phosphate synthase low > 62
Paraburkholderia sabiae LMG 24235 0.63 QEN71_RS25095 cobyric acid synthase 0.51 QEN71_RS25105 adenosylcobinamide-phosphate synthase CbiB low > 153
Herbaspirillum seropedicae SmR1 0.63 HSERO_RS13230 cobyric acid synthase 0.46 HSERO_RS13240 cobalamin biosynthesis protein CobD 0.59 11
Shewanella sp. ANA-3 0.62 Shewana3_3275 cobyric acid synthase (RefSeq) 0.13 Shewana3_3053 cobalamin biosynthesis protein CbiB (RefSeq) low > 73
Shewanella oneidensis MR-1 0.62 SO1038 cobQ cobyric acid synthase CobQ (NCBI ptt file) 0.13 SO1321 CobD-related protein (NCBI ptt file) low > 76
Paraburkholderia bryophila 376MFSha3.1 0.61 H281DRAFT_00146 adenosylcobyric acid synthase (glutamine-hydrolysing) 0.47 H281DRAFT_00144 adenosylcobinamide-phosphate synthase (EC 6.3.1.10) — —
Dechlorosoma suillum PS 0.61 Dsui_0542 cobyric acid synthase CobQ 0.52 Dsui_0541 cobalamin biosynthesis protein CobD low > 51
Paraburkholderia graminis OAS925 0.61 ABIE53_001255 adenosylcobyric acid synthase 0.47 ABIE53_001253 adenosylcobinamide-phosphate synthase 0.94 9
Burkholderia phytofirmans PsJN 0.60 BPHYT_RS04900 cobyric acid synthase 0.50 BPHYT_RS04890 cobalamin biosynthesis protein CobD low > 109
Shewanella loihica PV-4 0.60 Shew_0717 cobyric acid synthase (RefSeq) 0.12 Shew_1026 cobalamin biosynthesis protein CbiB (RefSeq) low > 60
Shewanella amazonensis SB2B 0.55 Sama_0765 cobyric acid synthase (RefSeq) 0.18 Sama_0854 CobD-related protein (RefSeq) low > 62
Azospirillum brasilense Sp245 0.45 AZOBR_RS09845 cobyric acid synthase 0.22 AZOBR_RS10235 cobalamin biosynthesis protein CobD low > 97
Magnetospirillum magneticum AMB-1 0.44 AMB_RS01485 cobyric acid synthase 0.21 AMB_RS01490 cobalamin biosynthesis protein — —
Azospirillum sp. SherDot2 0.44 MPMX19_01025 Cobyric acid synthase 0.23 MPMX19_01266 Cobalamin biosynthesis protein CbiB — —
Rhodospirillum rubrum S1H 0.44 Rru_A3381 Cobyric acid synthase CobQ (NCBI) 0.25 Rru_A3382 Cobalamin biosynthesis protein CbiB (NCBI) low > 58
Sphingomonas koreensis DSMZ 15582 0.43 Ga0059261_0630 adenosylcobyric acid synthase (glutamine-hydrolysing) (EC 6.3.5.10) 0.21 Ga0059261_0629 cobalamin biosynthesis protein CobD low > 68
Sinorhizobium meliloti 1021 0.42 SMc04309 cobyric acid synthase 0.24 SMc04279 cobalamin biosynthesis protein — —
Rhizobium sp. OAE497 0.42 ABIE40_RS11175 cobyric acid synthase 0.23 ABIE40_RS11095 adenosylcobinamide-phosphate synthase CbiB 0.90 43
Phaeobacter inhibens DSM 17395 0.41 PGA1_c24000 cobyric acid synthase CobQ 0.26 PGA1_c00820 putative cobalamin biosynthesis protein CobD — —
Rhodopseudomonas palustris CGA009 0.40 TX73_010800 cobyric acid synthase 0.24 TX73_003720 adenosylcobinamide-phosphate synthase CbiB — —
Agrobacterium fabrum C58 0.40 Atu2808 cobyric acid synthase 0.17 Atu2809 cobalamin biosynthesis protein 0.83 2
Fusobacterium nucleatum SB010 0.39 HUW76_05230 cobyric acid synthase 0.24 HUW76_05240 cobalamin biosynthesis protein CobD low > 35
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.39 GFF3966 Cobyric acid synthase (EC 6.3.5.10) 0.25 GFF3951 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) low > 78
Klebsiella michiganensis M5al 0.39 BWI76_RS23010 cobyric acid synthase CobQ 0.25 BWI76_RS23085 adenosylcobinamide-phosphate synthase 0.19 48
Synechococcus elongatus PCC 7942 0.38 Synpcc7942_0211 cobQ cobyric acid synthase 0.21 Synpcc7942_1441 cobD cobalamin biosynthesis protein — —
Bosea sp. OAE506 0.38 ABIE41_RS03845 cobyric acid synthase 0.20 ABIE41_RS01755 adenosylcobinamide-phosphate synthase CbiB — —
Phocaeicola vulgatus CL09T03C04 0.38 HMPREF1058_RS01395 cobyric acid synthase 0.27 HMPREF1058_RS01385 cobalamin biosynthesis protein CobD 0.90 4
Parabacteroides merdae CL09T00C40 0.38 HMPREF1078_RS00930 cobyric acid synthase 0.26 HMPREF1078_RS17695 adenosylcobinamide-phosphate synthase CbiB 0.87 3
Phocaeicola dorei CL03T12C01 0.38 ABI39_RS15660 cobyric acid synthase 0.27 ABI39_RS15670 cobalamin biosynthesis protein CobD 0.95 6
Dinoroseobacter shibae DFL-12 0.37 Dshi_2096 cobyric acid synthase CobQ (RefSeq) 0.23 Dshi_0165 cobalamin biosynthesis protein CobD (RefSeq) — —
Desulfovibrio vulgaris Hildenborough JW710 0.37 DVU0816 cobQ cobyric acid synthase CobQ (TIGR) 0.23 DVU2237 cbiB cobalamin biosynthesis protein CobD, putative (TIGR) 0.95 8
Mycobacterium tuberculosis H37Rv 0.36 Rv0255c Probable cobyric acid synthase CobQ1 0.27 Rv2236c Probable cobalamin biosynthesis transmembrane protein CobD low > 58
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF3998 Cobyric acid synthase (EC 6.3.5.10) 0.23 GFF3996 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) low > 90
Variovorax sp. SCN45 0.34 GFF426 Cobyric acid synthase (EC 6.3.5.10) 0.21 GFF439 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) 0.80 10
Variovorax sp. OAS795 0.33 ABID97_RS17340 cobyric acid synthase 0.21 ABID97_RS17390 adenosylcobinamide-phosphate synthase CbiB low > 91
Methanococcus maripaludis S2 0.31 MMP_RS06255 cobyric acid synthase CobQ 0.23 MMP_RS04930 adenosylcobinamide-phosphate synthase CbiB — —
Methanococcus maripaludis JJ 0.31 MMJJ_RS08095 cobyric acid synthase CobQ 0.23 MMJJ_RS00205 adenosylcobinamide-phosphate synthase CbiB 0.77 10

Not shown: 4 genomes with orthologs for PS417_20040 only; 2 genomes with orthologs for PS417_20050 only