| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Marinobacter adhaerens HP15 | 1.0 | HP15_1834 | | protein containing 3-isopropylmalate dehydratase, large subunit region domain | 1.0 | HP15_3291 | | indole-3-glycerol phosphate synthase | 0.82 | 20 |
| Pseudomonas sp. S08-1 | 0.81 | OH686_04480 | | 3-isopropylmalate dehydratase large subunit | 0.61 | OH686_15140 | | Indole-3-glycerol phosphate synthase | 0.75 | 25 |
| Pseudomonas sp. RS175 | 0.80 | PFR28_02824 | | 3-isopropylmalate dehydratase large subunit | 0.61 | PFR28_04043 | | Indole-3-glycerol phosphate synthase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.80 | Pf6N2E2_63 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.61 | Pf6N2E2_4826 | | Indole-3-glycerol phosphate synthase (EC 4.1.1.48) | 0.85 | 7 |
| Pseudomonas fluorescens FW300-N2C3 | 0.80 | AO356_21400 | | isopropylmalate isomerase | 0.60 | AO356_14440 | | indole-3-glycerol-phosphate synthase | 0.90 | 22 |
| Pseudomonas stutzeri RCH2 | 0.79 | Psest_2591 | | 3-isopropylmalate dehydratase, large subunit | 0.62 | Psest_3647 | | Indole-3-glycerol phosphate synthase | 0.75 | 30 |
| Pseudomonas fluorescens GW456-L13 | 0.79 | PfGW456L13_3948 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.61 | PfGW456L13_1222 | | Indole-3-glycerol phosphate synthase (EC 4.1.1.48) | 0.86 | 37 |
| Pseudomonas fluorescens FW300-N2E3 | 0.79 | AO353_20620 | | isopropylmalate isomerase | 0.60 | AO353_07210 | | indole-3-glycerol-phosphate synthase | 0.91 | 15 |
| Pseudomonas fluorescens FW300-N1B4 | 0.79 | Pf1N1B4_15 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.60 | Pf1N1B4_2549 | | Indole-3-glycerol phosphate synthase (EC 4.1.1.48) | 0.85 | 14 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.79 | Xcc-8004.1049.1 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.54 | Xcc-8004.622.1 | | Indole-3-glycerol phosphate synthase (EC 4.1.1.48) | 0.94 | 5 |
| Pseudomonas putida KT2440 | 0.79 | PP_1985 | | 3-isopropylmalate dehydratase large subunit | 0.61 | PP_0422 | | Indole-3-glycerol phosphate synthase | 0.87 | 18 |
| Pseudomonas fluorescens SBW25 | 0.78 | PFLU_RS20580 | | 3-isopropylmalate dehydratase large subunit | 0.61 | PFLU_RS27365 | | indole-3-glycerol phosphate synthase TrpC | 0.69 | 17 |
| Pseudomonas syringae pv. syringae B728a | 0.78 | Psyr_1983 | | 3-isopropylmalate dehydratase, large subunit | 0.58 | Psyr_4579 | | indole-3-glycerol phosphate synthase | low | > 86 |
| Pseudomonas fluorescens SBW25-INTG | 0.78 | PFLU_RS20580 | | 3-isopropylmalate dehydratase large subunit | 0.61 | PFLU_RS27365 | | indole-3-glycerol phosphate synthase TrpC | 0.85 | 11 |
| Pseudomonas simiae WCS417 | 0.78 | PS417_18600 | | isopropylmalate isomerase | 0.61 | PS417_25710 | | indole-3-glycerol-phosphate synthase | 0.80 | 28 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.78 | Psyr_1983 | | 3-isopropylmalate dehydratase, large subunit | 0.58 | Psyr_4579 | | indole-3-glycerol phosphate synthase | low | > 86 |
| Acinetobacter radioresistens SK82 | 0.75 | MPMX26_00345 | | 3-isopropylmalate dehydratase large subunit | 0.45 | MPMX26_00983 | | Indole-3-glycerol phosphate synthase | 0.93 | 16 |
| Ralstonia solanacearum PSI07 | 0.74 | RPSI07_RS14695 | | 3-isopropylmalate dehydratase large subunit | 0.48 | RPSI07_RS10735 | | indole-3-glycerol phosphate synthase TrpC | — | — |
| Ralstonia sp. UNC404CL21Col | 0.74 | ABZR87_RS14540 | | 3-isopropylmalate dehydratase large subunit | 0.50 | ABZR87_RS02160 | | indole-3-glycerol phosphate synthase TrpC | 0.88 | 12 |
| Ralstonia solanacearum GMI1000 | 0.73 | RS_RS10000 | | 3-isopropylmalate dehydratase large subunit | 0.47 | RS_RS14450 | | Indole-3-glycerol phosphate synthase 1 | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.73 | QEN71_RS17605 | | 3-isopropylmalate dehydratase large subunit | 0.52 | QEN71_RS27565 | | indole-3-glycerol phosphate synthase TrpC | 0.75 | 42 |
| Ralstonia solanacearum UW163 | 0.73 | UW163_RS11105 | | 3-isopropylmalate dehydratase large subunit | 0.47 | UW163_RS07120 | | indole-3-glycerol phosphate synthase TrpC | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.73 | H281DRAFT_06075 | | 3-isopropylmalate dehydratase, large subunit | 0.47 | H281DRAFT_05712 | | indole-3-glycerol phosphate synthase | 0.62 | 16 |
| Ralstonia solanacearum IBSBF1503 | 0.73 | RALBFv3_RS02620 | | 3-isopropylmalate dehydratase large subunit | 0.47 | RALBFv3_RS06505 | | indole-3-glycerol phosphate synthase TrpC | — | — |
| Burkholderia phytofirmans PsJN | 0.73 | BPHYT_RS33915 | | isopropylmalate isomerase | 0.48 | BPHYT_RS17405 | | indole-3-glycerol phosphate synthase | 0.82 | 42 |
| Paraburkholderia graminis OAS925 | 0.73 | ABIE53_004801 | | 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit | 0.47 | ABIE53_003643 | | indole-3-glycerol phosphate synthase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.72 | RR42_RS14400 | | isopropylmalate isomerase | 0.50 | RR42_RS18310 | | indole-3-glycerol-phosphate synthase | low | > 128 |
| Castellaniella sp019104865 MT123 | 0.72 | ABCV34_RS04290 | | 3-isopropylmalate dehydratase large subunit | 0.50 | ABCV34_RS10310 | | indole-3-glycerol phosphate synthase TrpC | — | — |
| Dechlorosoma suillum PS | 0.72 | Dsui_3201 | | 3-isopropylmalate dehydratase, large subunit | 0.50 | Dsui_0168 | | Indole-3-glycerol phosphate synthase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.72 | HSERO_RS16515 | | isopropylmalate isomerase | 0.45 | HSERO_RS19450 | | indole-3-glycerol-phosphate synthase | 0.90 | 21 |
| Variovorax sp. OAS795 | 0.70 | ABID97_RS08465 | | 3-isopropylmalate dehydratase large subunit | 0.50 | ABID97_RS05280 | | indole-3-glycerol phosphate synthase TrpC | — | — |
| Variovorax sp. SCN45 | 0.69 | GFF3890 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.50 | GFF5890 | | Indole-3-glycerol phosphate synthase (EC 4.1.1.48) | — | — |
| Acidovorax sp. GW101-3H11 | 0.69 | Ac3H11_1525 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.50 | Ac3H11_772 | | Indole-3-glycerol phosphate synthase (EC 4.1.1.48) | 0.93 | 12 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.69 | GFF3363 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.50 | GFF3111 | | Indole-3-glycerol phosphate synthase (EC 4.1.1.48) | 0.73 | 22 |
| Rhodospirillum rubrum S1H | 0.68 | Rru_A1189 | | 3-isopropylmalate dehydratase large subunit region (NCBI) | 0.46 | Rru_A1897 | | Indole-3-glycerol-phosphate synthase (NCBI) | 0.93 | 12 |
| Azospirillum sp. SherDot2 | 0.66 | MPMX19_01998 | | 3-isopropylmalate dehydratase large subunit | 0.42 | MPMX19_01014 | | Indole-3-glycerol phosphate synthase | 0.80 | 21 |
| Sinorhizobium meliloti 1021 | 0.66 | SMc03823 | | isopropylmalate isomerase large subunit | 0.42 | SMc00236 | | Indole-3-glycerol phosphate synthase | 0.71 | 79 |
| Azospirillum brasilense Sp245 | 0.66 | AZOBR_RS03545 | | isopropylmalate isomerase | 0.42 | AZOBR_RS07450 | | indole-3-glycerol-phosphate synthase | 0.88 | 14 |
| Agrobacterium fabrum C58 | 0.64 | Atu2709 | | 3-isopropylmalate dehydratase, large subunit | 0.45 | Atu1688 | | indole-3-glycerol-phosphate synthase | 0.88 | 33 |
| Bosea sp. OAE506 | 0.64 | ABIE41_RS11660 | | 3-isopropylmalate dehydratase large subunit | 0.39 | ABIE41_RS17425 | | indole-3-glycerol phosphate synthase TrpC | — | — |
| Rhizobium sp. OAE497 | 0.64 | ABIE40_RS18380 | | 3-isopropylmalate dehydratase large subunit | 0.47 | ABIE40_RS09550 | | indole-3-glycerol phosphate synthase TrpC | — | — |
| Magnetospirillum magneticum AMB-1 | 0.64 | AMB_RS20560 | | 3-isopropylmalate dehydratase large subunit | 0.44 | AMB_RS14415 | | indole-3-glycerol phosphate synthase TrpC | — | — |
| Rhodanobacter denitrificans MT42 | 0.63 | LRK55_RS07105 | | 3-isopropylmalate dehydratase large subunit | 0.49 | LRK55_RS11300 | | indole-3-glycerol phosphate synthase TrpC | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.63 | LRK54_RS07375 | | 3-isopropylmalate dehydratase large subunit | 0.49 | LRK54_RS11570 | | indole-3-glycerol phosphate synthase TrpC | low | > 59 |
| Rhodopseudomonas palustris CGA009 | 0.62 | TX73_001245 | | 3-isopropylmalate dehydratase large subunit | 0.42 | TX73_014985 | | indole-3-glycerol phosphate synthase TrpC | — | — |
| Caulobacter crescentus NA1000 | 0.62 | CCNA_00196 | | 3-isopropylmalate dehydratase large subunit | 0.39 | CCNA_01976 | | Indole-3-glycerol phosphate synthase | 0.91 | 38 |
| Caulobacter crescentus NA1000 Δfur | 0.62 | CCNA_00196 | | 3-isopropylmalate dehydratase large subunit | 0.39 | CCNA_01976 | | Indole-3-glycerol phosphate synthase | low | > 67 |
| Phaeobacter inhibens DSM 17395 | 0.61 | PGA1_c29780 | | 3-isopropylmalate dehydratase large subunit | 0.41 | PGA1_c16910 | | indole-3-glycerol phosphate synthase TrpC | — | — |
| Dinoroseobacter shibae DFL-12 | 0.60 | Dshi_0085 | | 3-isopropylmalate dehydratase, large subunit (RefSeq) | 0.44 | Dshi_1800 | | Indole-3-glycerol-phosphate synthase (RefSeq) | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.58 | Ga0059261_4223 | | 3-isopropylmalate dehydratase, large subunit | 0.46 | Ga0059261_0930 | | indole-3-glycerol phosphate synthase (EC 4.1.1.48) | 0.95 | 37 |
| Mycobacterium tuberculosis H37Rv | 0.56 | Rv2988c | | Probable 3-isopropylmalate dehydratase (large subunit) LeuC (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI) | 0.27 | Rv1611 | | Probable indole-3-glycerol phosphate synthase TrpC | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.52 | ABZR88_RS11595 | | 3-isopropylmalate dehydratase large subunit | 0.35 | ABZR88_RS16605 | | indole-3-glycerol phosphate synthase TrpC | — | — |
| Bacteroides stercoris CC31F | 0.52 | HMPREF1181_RS14145 | | 3-isopropylmalate dehydratase large subunit | 0.29 | HMPREF1181_RS15340 | | indole-3-glycerol phosphate synthase TrpC | 0.86 | 44 |
| Parabacteroides merdae CL09T00C40 | 0.52 | HMPREF1078_RS16660 | | 3-isopropylmalate dehydratase large subunit | 0.33 | HMPREF1078_RS00130 | | indole-3-glycerol phosphate synthase TrpC | 0.92 | 49 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.52 | CA264_09435 | | 3-isopropylmalate dehydratase large subunit | 0.21 | CA264_05070 | | indole-3-glycerol phosphate synthase | low | > 74 |
| Phocaeicola dorei CL03T12C01 | 0.51 | ABI39_RS10200 | | 3-isopropylmalate dehydratase large subunit | 0.27 | ABI39_RS21065 | | indole-3-glycerol phosphate synthase TrpC | 0.76 | 50 |
| Phocaeicola vulgatus CL09T03C04 | 0.51 | HMPREF1058_RS14550 | | 3-isopropylmalate dehydratase large subunit | 0.26 | HMPREF1058_RS07190 | | indole-3-glycerol phosphate synthase TrpC | 0.88 | 4 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.51 | CA265_RS15830 | | 3-isopropylmalate dehydratase large subunit | 0.36 | CA265_RS22900 | | indole-3-glycerol phosphate synthase | low | > 88 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.51 | BT1860 | | 3-isopropylmalate dehydratase large subunit (NCBI ptt file) | 0.35 | BT0529 | | indole-3-glycerol phosphate synthase (NCBI ptt file) | 0.81 | 39 |
| Bacteroides ovatus ATCC 8483 | 0.51 | BACOVA_04603 | | 3-isopropylmalate dehydratase, large subunit | 0.34 | BACOVA_03783 | | indole-3-glycerol phosphate synthase | 0.92 | 43 |
| Lysobacter sp. OAE881 | 0.49 | ABIE51_RS17575 | | 3-isopropylmalate dehydratase large subunit | 0.54 | ABIE51_RS04190 | | indole-3-glycerol phosphate synthase TrpC | low | > 62 |
| Dyella japonica UNC79MFTsu3.2 | 0.48 | ABZR86_RS15960 | | 3-isopropylmalate dehydratase large subunit | 0.53 | ABZR86_RS12065 | | indole-3-glycerol phosphate synthase TrpC | 0.90 | 59 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.48 | A4249_RS10005 | | 3-isopropylmalate dehydratase large subunit | 0.38 | A4249_RS06175 | | indole-3-glycerol phosphate synthase TrpC | — | — |
| Synechococcus elongatus PCC 7942 | 0.46 | Synpcc7942_1898 | leuC | isopropylmalate isomerase large subunit | 0.32 | Synpcc7942_1197 | trpC | indole-3-glycerol-phosphate synthase | — | — |
| Rhodanobacter sp. FW510-T8 | 0.46 | OKGIIK_13585 | leuC | 3-isopropylmalate dehydratase large subunit | 0.53 | OKGIIK_12280 | trpC | indole-3-glycerol phosphate synthase TrpC | low | > 52 |
Not shown: 35 genomes with orthologs for HP15_1834 only; 2 genomes with orthologs for HP15_3291 only