| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas simiae WCS417 | 1.0 | PS417_09200 | | ABC transporter | 1.0 | PS417_16510 | | Clp protease ClpX | 0.25 | 11 |
| Pseudomonas fluorescens SBW25-INTG | 1.00 | PFLU_RS09210 | | ABC transporter ATP-binding protein | 0.99 | PFLU_RS18550 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 109 |
| Pseudomonas fluorescens SBW25 | 1.00 | PFLU_RS09210 | | ABC transporter ATP-binding protein | 0.99 | PFLU_RS18550 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.96 | Pf1N1B4_476 | | ABC-type multidrug transport system, ATPase component | 0.97 | Pf1N1B4_4055 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.95 | PfGW456L13_2080 | | ABC-type multidrug transport system, ATPase component | 0.97 | PfGW456L13_2646 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.95 | AO353_01485 | | ABC transporter | 0.96 | AO353_27675 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.94 | Pf6N2E2_5927 | | ABC-type multidrug transport system, ATPase component | 0.97 | Pf6N2E2_292 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.94 | AO356_20045 | | ABC transporter | 0.97 | AO356_22150 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 104 |
| Pseudomonas sp. RS175 | 0.92 | PFR28_03034 | | putative ABC transporter ATP-binding protein YadG | 0.98 | PFR28_02613 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 88 |
| Pseudomonas putida KT2440 | 0.90 | PP_1895 | | putative ABC transporter - ATP binding subunit | 0.93 | PP_4008 | | ATP-dependent serine protease | low | > 96 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.90 | Psyr_1630 | | ABC transporter | 0.96 | Psyr_3183 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.90 | Psyr_1630 | | ABC transporter | 0.96 | Psyr_3183 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 86 |
| Pseudomonas sp. S08-1 | 0.86 | OH686_22655 | | Uncharacterized efflux ABC transporter, ATP-binding protein YadG | 0.92 | OH686_00235 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.85 | Psest_2716 | | ABC-type multidrug transport system, ATPase component | 0.91 | Psest_2027 | | ATP-dependent Clp protease ATP-binding subunit clpA | low | > 67 |
| Marinobacter adhaerens HP15 | 0.69 | HP15_1461 | | ATP-binding component of ABC transporter | 0.78 | HP15_2080 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 73 |
| Shewanella amazonensis SB2B | 0.68 | Sama_0772 | | ABC transporter, ATP-binding protein (RefSeq) | 0.70 | Sama_2056 | | ATP-dependent Clp protease, ATP-binding subunit ClpA (RefSeq) | low | > 62 |
| Alteromonas macleodii MIT1002 | 0.67 | MIT1002_03700 | | Daunorubicin/doxorubicin resistance ATP-binding protein DrrA | 0.67 | MIT1002_01834 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 70 |
| Acinetobacter radioresistens SK82 | 0.66 | MPMX26_02103 | | putative ABC transporter ATP-binding protein YadG | 0.63 | MPMX26_01284 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 36 |
| Shewanella loihica PV-4 | 0.66 | Shew_3141 | | ABC transporter-related protein (RefSeq) | 0.69 | Shew_1566 | | ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) | low | > 60 |
| Enterobacter asburiae PDN3 | 0.66 | EX28DRAFT_3724 | | ABC-type multidrug transport system, ATPase component | 0.67 | EX28DRAFT_2050 | | ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.66 | GFF101 | | ABC-type multidrug transport system, ATPase component | 0.67 | GFF4901 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 78 |
| Shewanella oneidensis MR-1 | 0.65 | SO3802 | | ABC transporter, ATP-binding protein (NCBI ptt file) | 0.69 | SO2626 | clpA | ATP-dependent Clp protease, ATP-binding subunit ClpA (NCBI ptt file) | low | > 76 |
| Serratia liquefaciens MT49 | 0.65 | IAI46_21265 | | ABC transporter ATP-binding protein | 0.66 | IAI46_08515 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 86 |
| Rahnella sp. WP5 | 0.65 | EX31_RS03300 | | ABC transporter ATP-binding protein | 0.66 | EX31_RS18560 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 89 |
| Enterobacter sp. TBS_079 | 0.65 | MPMX20_00821 | | putative ABC transporter ATP-binding protein YadG | 0.67 | MPMX20_01544 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 85 |
| Shewanella sp. ANA-3 | 0.65 | Shewana3_0794 | | ABC transporter related (RefSeq) | 0.70 | Shewana3_1753 | | ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) | low | > 73 |
| Escherichia coli ECRC62 | 0.65 | BNILDI_08890 | yadG | Uncharacterized ABC transporter ATP-binding protein YadG | 0.67 | BNILDI_20435 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 75 |
| Escherichia coli BL21 | 0.65 | ECD_00126 | | putative ABC transporter ATPase | 0.67 | ECD_00887 | | ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity | low | > 61 |
| Escherichia coli Nissle 1917 | 0.65 | ECOLIN_RS00705 | | ABC transporter ATP-binding protein | 0.67 | ECOLIN_RS04695 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 55 |
| Escherichia fergusonii Becca | 0.65 | EFB2_03918 | | putative ABC transporter ATP-binding protein YadG | 0.67 | EFB2_03179 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 86 |
| Escherichia coli ECOR27 | 0.65 | NOLOHH_02780 | yadG | Uncharacterized ABC transporter ATP-binding protein YadG | 0.67 | NOLOHH_22180 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 75 |
| Escherichia coli ECOR38 | 0.65 | HEPCGN_08415 | yadG | Uncharacterized ABC transporter ATP-binding protein YadG | 0.67 | HEPCGN_22900 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.65 | OHPLBJKB_03534 | | putative ABC transporter ATP-binding protein YadG | 0.67 | OHPLBJKB_02786 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 73 |
| Escherichia coli BW25113 | 0.65 | b0127 | yadG | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | 0.67 | b0882 | clpA | ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity (NCBI) | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.65 | LU632_RS20125 | | ABC transporter ATP-binding protein | 0.64 | LU632_RS09705 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 74 |
| Klebsiella michiganensis M5al | 0.65 | BWI76_RS04965 | | ABC transporter ATP-binding protein | 0.67 | BWI76_RS09615 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 92 |
| Escherichia coli ECRC102 | 0.65 | NIAGMN_08285 | yadG | Uncharacterized ABC transporter ATP-binding protein YadG | 0.67 | NIAGMN_03825 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Escherichia coli ECRC99 | 0.65 | KEDOAH_17720 | yadG | Uncharacterized ABC transporter ATP-binding protein YadG | 0.67 | KEDOAH_22125 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Escherichia coli ECRC98 | 0.65 | JDDGAC_14030 | yadG | Uncharacterized ABC transporter ATP-binding protein YadG | 0.67 | JDDGAC_09420 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 86 |
| Escherichia coli ECRC100 | 0.65 | OKFHMN_10435 | yadG | Uncharacterized ABC transporter ATP-binding protein YadG | 0.67 | OKFHMN_05785 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 80 |
| Escherichia coli ECRC101 | 0.65 | MCAODC_00950 | yadG | Uncharacterized ABC transporter ATP-binding protein YadG | 0.67 | MCAODC_25000 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 87 |
| Pectobacterium carotovorum WPP14 | 0.65 | HER17_RS05540 | | ABC transporter ATP-binding protein | 0.67 | HER17_RS12400 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 75 |
| Dickeya dadantii 3937 | 0.64 | DDA3937_RS15975 | | ABC transporter ATP-binding protein | 0.67 | DDA3937_RS09560 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 74 |
| Kangiella aquimarina DSM 16071 | 0.64 | B158DRAFT_2037 | | ABC-type multidrug transport system, ATPase component | 0.68 | B158DRAFT_1505 | | ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) | 0.33 | 37 |
| Vibrio cholerae E7946 ATCC 55056 | 0.64 | CSW01_03120 | | ABC transporter ATP-binding protein | 0.67 | CSW01_05805 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 62 |
| Dickeya dianthicola 67-19 | 0.64 | HGI48_RS16090 | | ABC transporter ATP-binding protein | 0.66 | HGI48_RS09575 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 71 |
| Dickeya dianthicola ME23 | 0.64 | DZA65_RS17175 | | ABC transporter ATP-binding protein | 0.67 | DZA65_RS09885 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 75 |
| Pantoea sp. MT58 | 0.64 | IAI47_15680 | | ABC transporter ATP-binding protein | 0.67 | IAI47_12945 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 76 |
| Rhodanobacter denitrificans FW104-10B01 | 0.61 | LRK54_RS07015 | | ABC transporter ATP-binding protein | 0.67 | LRK54_RS00420 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Rhodanobacter sp. FW510-T8 | 0.61 | OKGIIK_16620 | ccmA | ABC transporter | 0.67 | OKGIIK_06890 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 52 |
| Rhodanobacter denitrificans MT42 | 0.61 | LRK55_RS06755 | | ABC transporter ATP-binding protein | 0.67 | LRK55_RS00160 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 63 |
| Dyella japonica UNC79MFTsu3.2 | 0.59 | ABZR86_RS16410 | | ABC transporter ATP-binding protein | 0.68 | ABZR86_RS02200 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 74 |
| Lysobacter sp. OAE881 | 0.56 | ABIE51_RS00700 | | ABC transporter ATP-binding protein | 0.66 | ABIE51_RS11490 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 62 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.52 | Xcc-8004.5047.1 | | ABC-type multidrug transport system, ATPase component | 0.66 | Xcc-8004.2754.1 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 74 |
| Azospirillum sp. SherDot2 | 0.41 | MPMX19_04645 | | putative ABC transporter ATP-binding protein YadG | 0.62 | MPMX19_00503 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 112 |
| Azospirillum brasilense Sp245 | 0.41 | AZOBR_RS23885 | | multidrug ABC transporter ATP-binding protein | 0.62 | AZOBR_RS05175 | | ATP-dependent Clp protease ATP-binding protein | low | > 97 |
| Rhodopseudomonas palustris CGA009 | 0.40 | TX73_018175 | | ABC transporter ATP-binding protein | 0.60 | TX73_016270 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 86 |
| Bosea sp. OAE506 | 0.40 | ABIE41_RS06205 | | ABC transporter ATP-binding protein | 0.60 | ABIE41_RS18235 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 77 |
| Rhodospirillum rubrum S1H | 0.40 | Rru_A0069 | | ABC transporter component (NCBI) | 0.63 | Rru_A2109 | | ATP-dependent Clp protease ATP-binding subunit ClpA (NCBI) | low | > 58 |
| Sphingomonas koreensis DSMZ 15582 | 0.39 | Ga0059261_2250 | | ABC-type multidrug transport system, ATPase component | 0.60 | Ga0059261_1001 | | ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) | low | > 68 |
| Rhizobium sp. OAE497 | 0.39 | ABIE40_RS10765 | | ABC transporter ATP-binding protein | 0.60 | ABIE40_RS08865 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 107 |
| Paraburkholderia sabiae LMG 24235 | 0.38 | QEN71_RS20365 | | ABC transporter ATP-binding protein | 0.65 | QEN71_RS03005 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 153 |
| Caulobacter crescentus NA1000 | 0.38 | CCNA_00188 | | ABC transporter ATP-binding protein | 0.60 | CCNA_02553 | | ATP-dependent clp protease ATP-binding subunit ClpA | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.38 | CCNA_00188 | | ABC transporter ATP-binding protein | 0.60 | CCNA_02553 | | ATP-dependent clp protease ATP-binding subunit ClpA | low | > 67 |
| Phaeobacter inhibens DSM 17395 | 0.38 | PGA1_c02830 | | ABC transporter, ATP-binding protein | 0.59 | PGA1_c25150 | | ATP-dependent Clp protease ATP-binding subunit | low | > 62 |
| Castellaniella sp019104865 MT123 | 0.38 | ABCV34_RS02920 | | ABC transporter ATP-binding protein | 0.62 | ABCV34_RS05305 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 48 |
| Magnetospirillum magneticum AMB-1 | 0.38 | AMB_RS21315 | | ABC transporter ATP-binding protein | 0.62 | AMB_RS05705 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 64 |
| Agrobacterium fabrum C58 | 0.38 | Atu1907 | | ABC transporter, nucleotide binding/ATPase protein | 0.57 | Atu1364 | | ATP-dependent Clp protease, ATP-binding subunit | 0.26 | 75 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.37 | A4249_RS13815 | | ABC transporter ATP-binding protein | 0.59 | A4249_RS08390 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.68 | 26 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.37 | GFF156 | | ABC-type multidrug transport system, ATPase component | 0.64 | GFF4521 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 90 |
| Sinorhizobium meliloti 1021 | 0.37 | SMc04219 | | ABC transporter ATP-binding protein | 0.58 | SMc02109 | | ATP-dependent Clp protease ATP-binding subunit protein | — | — |
| Dinoroseobacter shibae DFL-12 | 0.36 | Dshi_2913 | | ABC transporter related (RefSeq) | 0.59 | Dshi_2939 | | ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) | low | > 64 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.36 | H281DRAFT_02996 | | ABC-2 type transport system ATP-binding protein | 0.65 | H281DRAFT_04082 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.35 | BPHYT_RS29975 | | multidrug ABC transporter ATP-binding protein | 0.65 | BPHYT_RS15710 | | ATP-dependent Clp protease ATP-binding protein | low | > 109 |
| Herbaspirillum seropedicae SmR1 | 0.34 | HSERO_RS20370 | | ABC transporter ATP-binding protein | 0.65 | HSERO_RS07030 | | ATP-dependent Clp protease ATP-binding protein | — | — |
| Dechlorosoma suillum PS | 0.33 | Dsui_1404 | | ABC-type multidrug transport system, ATPase component | 0.66 | Dsui_0009 | | ATP-dependent Clp protease ATP-binding subunit clpA | low | > 51 |
| Acidovorax sp. GW101-3H11 | 0.33 | Ac3H11_4718 | | Methionine ABC transporter ATP-binding protein | 0.64 | Ac3H11_2456 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 79 |
| Cupriavidus basilensis FW507-4G11 | 0.33 | RR42_RS18940 | | ABC transporter ATP-binding protein | 0.64 | RR42_RS17105 | | Clp protease ClpX | low | > 128 |
| Variovorax sp. SCN45 | 0.32 | GFF5340 | | Efflux ABC transporter, ATP-binding protein | 0.64 | GFF341 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 127 |
| Variovorax sp. OAS795 | 0.32 | ABID97_RS23185 | | ABC transporter ATP-binding protein | 0.64 | ABID97_RS16910 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 91 |
Not shown: 5 genomes with orthologs for PS417_09200 only; 9 genomes with orthologs for PS417_16510 only