| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Variovorax sp. SCN45 | 1.0 | GFF4449 | | TldD protein, part of TldE/TldD proteolytic complex | 1.0 | GFF2307 | | Heme O synthase, protoheme IX farnesyltransferase, COX10-CtaB | 0.94 | 1 |
| Variovorax sp. OAS795 | 0.95 | ABID97_RS06335 | | metalloprotease TldD | 0.95 | ABID97_RS23915 | | heme o synthase | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.86 | Ac3H11_4036 | | TldD protein, part of TldE/TldD proteolytic complex | 0.83 | Ac3H11_3883 | | Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.85 | GFF580 | | TldD protein, part of TldE/TldD proteolytic complex | 0.81 | GFF698 | | Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB | 0.69 | 8 |
| Herbaspirillum seropedicae SmR1 | 0.73 | HSERO_RS07155 | | peptidase C69 | 0.57 | HSERO_RS20745 | | protoheme IX farnesyltransferase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.73 | RR42_RS05875 | | protease TldD | 0.61 | RR42_RS01920 | | protoheme IX farnesyltransferase | low | > 128 |
| Ralstonia sp. UNC404CL21Col | 0.72 | ABZR87_RS01105 | | metalloprotease TldD | 0.60 | ABZR87_RS06845 | | heme o synthase | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.72 | RS_RS13315 | | metalloprotease TldD | 0.60 | RS_RS01830 | | protoheme IX farnesyltransferase | low | > 80 |
| Burkholderia phytofirmans PsJN | 0.72 | BPHYT_RS03540 | | peptidase C69 | 0.62 | BPHYT_RS02690 | | protoheme IX farnesyltransferase | low | > 109 |
| Ralstonia solanacearum UW163 | 0.72 | UW163_RS08170 | | metalloprotease TldD | 0.61 | UW163_RS02590 | | protoheme IX farnesyltransferase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.72 | RALBFv3_RS05455 | | metalloprotease TldD | 0.61 | RALBFv3_RS10990 | | protoheme IX farnesyltransferase | 0.70 | 40 |
| Paraburkholderia sabiae LMG 24235 | 0.71 | QEN71_RS26555 | | metalloprotease TldD | 0.61 | QEN71_RS01545 | | heme o synthase | low | > 153 |
| Ralstonia solanacearum PSI07 | 0.71 | RPSI07_RS11850 | | metalloprotease TldD | 0.61 | RPSI07_RS22315 | | protoheme IX farnesyltransferase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.71 | H281DRAFT_04688 | | microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 | 0.61 | H281DRAFT_01985 | | protoheme IX farnesyltransferase | 0.35 | 17 |
| Paraburkholderia graminis OAS925 | 0.71 | ABIE53_000851 | | TldD protein | 0.59 | ABIE53_000683 | | protoheme IX farnesyltransferase | low | > 113 |
| Castellaniella sp019104865 MT123 | 0.70 | ABCV34_RS02590 | | metalloprotease TldD | 0.54 | ABCV34_RS13230 | | heme o synthase | low | > 48 |
| Dyella japonica UNC79MFTsu3.2 | 0.62 | ABZR86_RS21715 | | metalloprotease TldD | 0.44 | ABZR86_RS12895 | | heme o synthase | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.61 | OKGIIK_10280 | tldD | metalloprotease TldD | 0.43 | OKGIIK_16555 | cyoE | heme o synthase | low | > 52 |
| Rhodanobacter denitrificans MT42 | 0.59 | LRK55_RS03145 | | metalloprotease TldD | 0.44 | LRK55_RS06825 | | heme o synthase | 0.82 | 3 |
| Alteromonas macleodii MIT1002 | 0.59 | MIT1002_00227 | | protease TldD | 0.44 | MIT1002_04027 | | Protoheme IX farnesyltransferase | low | > 70 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.59 | Xcc-8004.1883.1 | | TldD protein, part of TldE/TldD proteolytic complex | 0.43 | Xcc-8004.4836.1 | | Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.59 | LRK54_RS03395 | | metalloprotease TldD | 0.44 | LRK54_RS07085 | | heme o synthase | low | > 59 |
| Shewanella sp. ANA-3 | 0.58 | Shewana3_3641 | | microcin-processing peptidase 2 (RefSeq) | 0.44 | Shewana3_3998 | | protoheme IX farnesyltransferase (RefSeq) | low | > 73 |
| Pseudomonas putida KT2440 | 0.58 | PP_0940 | | putative protease involved in Microcin B17 maturation and in sensitivity to the DNA gyrase inhibitor LetD | 0.38 | PP_0110 | | CyoE like protoheme IX farnesyltransferase | low | > 96 |
| Lysobacter sp. OAE881 | 0.58 | ABIE51_RS06795 | | metalloprotease TldD | 0.46 | ABIE51_RS19165 | | heme o synthase | low | > 62 |
| Pantoea sp. MT58 | 0.58 | IAI47_02465 | | metalloprotease TldD | 0.27 | IAI47_14700 | | protoheme IX farnesyltransferase | low | > 76 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.58 | Psyr_4156 | | microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 | 0.24 | Psyr_1145 | | Protoheme IX farnesyltransferase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.58 | Psyr_4156 | | microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 | 0.24 | Psyr_1145 | | Protoheme IX farnesyltransferase | — | — |
| Shewanella oneidensis MR-1 | 0.57 | SO4091 | tldD | tldD protein (NCBI ptt file) | 0.45 | SO4614 | ctaB | protoheme IX farnesyltransferase (NCBI ptt file) | low | > 76 |
| Shewanella loihica PV-4 | 0.56 | Shew_0410 | | peptidase U62, modulator of DNA gyrase (RefSeq) | 0.41 | Shew_0117 | | protoheme IX farnesyltransferase (RefSeq) | low | > 60 |
| Serratia liquefaciens MT49 | 0.56 | IAI46_22685 | | metalloprotease TldD | 0.26 | IAI46_04965 | | protoheme IX farnesyltransferase | low | > 86 |
| Pseudomonas fluorescens SBW25 | 0.56 | PFLU_RS04340 | | metalloprotease TldD | 0.40 | PFLU_RS00330 | | protoheme IX farnesyltransferase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.56 | PFLU_RS04340 | | metalloprotease TldD | 0.40 | PFLU_RS00330 | | protoheme IX farnesyltransferase | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.56 | AO353_05215 | | protease TldD | 0.43 | AO353_10870 | | protoheme IX farnesyltransferase | low | > 101 |
| Pseudomonas simiae WCS417 | 0.56 | PS417_04285 | | protease TldD | 0.38 | PS417_00340 | | protoheme IX farnesyltransferase | low | > 88 |
| Pseudomonas stutzeri RCH2 | 0.56 | Psest_3320 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.43 | Psest_4334 | | protoheme IX farnesyltransferase | low | > 67 |
| Dickeya dadantii 3937 | 0.56 | DDA3937_RS01460 | | metalloprotease TldD | 0.27 | DDA3937_RS05595 | | protoheme IX farnesyltransferase | low | > 74 |
| Dickeya dianthicola 67-19 | 0.56 | HGI48_RS01380 | | metalloprotease TldD | 0.26 | HGI48_RS05640 | | protoheme IX farnesyltransferase | 0.46 | 46 |
| Pseudomonas sp. RS175 | 0.56 | PFR28_00161 | | Metalloprotease TldD | 0.44 | PFR28_04683 | | Protoheme IX farnesyltransferase | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.56 | Pf1N1B4_1092 | | TldD protein, part of TldE/TldD proteolytic complex | 0.45 | Pf1N1B4_1862 | | Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.55 | AO356_07095 | | protease TldD | 0.44 | AO356_11200 | | protoheme IX farnesyltransferase | low | > 104 |
| Pseudomonas sp. S08-1 | 0.55 | OH686_08580 | | TldD protein, part of TldE/TldD proteolytic complex | 0.40 | OH686_12285 | | protoheme IX farnesyltransferase | low | > 80 |
| Dickeya dianthicola ME23 | 0.55 | DZA65_RS01440 | | metalloprotease TldD | 0.26 | DZA65_RS05965 | | protoheme IX farnesyltransferase | low | > 75 |
| Enterobacter sp. TBS_079 | 0.55 | MPMX20_04151 | | Metalloprotease TldD | 0.26 | MPMX20_01019 | | Protoheme IX farnesyltransferase | 0.30 | 18 |
| Pseudomonas fluorescens FW300-N2E2 | 0.55 | Pf6N2E2_3280 | | TldD protein, part of TldE/TldD proteolytic complex | 0.44 | Pf6N2E2_4106 | | Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone | low | > 103 |
| Pseudomonas fluorescens GW456-L13 | 0.55 | PfGW456L13_5026 | | TldD protein, part of TldE/TldD proteolytic complex | 0.44 | PfGW456L13_606 | | Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone | low | > 87 |
| Klebsiella michiganensis M5al | 0.55 | BWI76_RS25470 | | metalloprotease TldD | 0.27 | BWI76_RS06475 | | protoheme IX farnesyltransferase | low | > 92 |
| Escherichia coli ECOR38 | 0.55 | HEPCGN_16620 | tldD | metalloprotease TldD | 0.27 | HEPCGN_06995 | cyoE | heme o synthase | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.55 | OHPLBJKB_00460 | | Metalloprotease TldD | 0.27 | OHPLBJKB_03245 | | Protoheme IX farnesyltransferase | low | > 73 |
| Escherichia coli Nissle 1917 | 0.55 | ECOLIN_RS18595 | | metalloprotease TldD | 0.27 | ECOLIN_RS02575 | | heme o synthase | low | > 55 |
| Escherichia coli ECRC98 | 0.55 | JDDGAC_21380 | tldD | metalloprotease TldD | 0.27 | JDDGAC_12035 | cyoE | heme o synthase | 0.64 | 46 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.55 | GFF2140 | | TldD protein, part of TldE/TldD proteolytic complex | 0.27 | GFF4342 | | Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB | low | > 78 |
| Escherichia coli BW25113 | 0.55 | b3244 | tldD | predicted peptidase (NCBI) | 0.27 | b0428 | cyoE | protoheme IX farnesyltransferase (NCBI) | low | > 76 |
| Escherichia coli ECRC100 | 0.55 | OKFHMN_17755 | tldD | metalloprotease TldD | 0.27 | OKFHMN_08380 | cyoE | heme o synthase | low | > 80 |
| Escherichia coli ECRC101 | 0.55 | MCAODC_08275 | tldD | metalloprotease TldD | 0.27 | MCAODC_27605 | cyoE | heme o synthase | low | > 87 |
| Escherichia coli ECRC62 | 0.55 | BNILDI_01980 | tldD | metalloprotease TldD | 0.27 | BNILDI_22730 | cyoE | heme o synthase | low | > 75 |
| Escherichia coli BL21 | 0.55 | ECD_03104 | | putative peptidase | 0.27 | ECD_00379 | | protoheme IX farnesyltransferase | low | > 61 |
| Shewanella amazonensis SB2B | 0.55 | Sama_0474 | | TldD protein (RefSeq) | 0.38 | Sama_3491 | | protoheme IX farnesyltransferase (RefSeq) | low | > 62 |
| Escherichia coli ECRC102 | 0.55 | NIAGMN_15515 | tldD | metalloprotease TldD | 0.27 | NIAGMN_06435 | cyoE | heme o synthase | — | — |
| Escherichia fergusonii Becca | 0.55 | EFB2_00586 | | Metalloprotease TldD | 0.27 | EFB2_03629 | | Protoheme IX farnesyltransferase | low | > 86 |
| Escherichia coli ECRC99 | 0.55 | KEDOAH_10395 | tldD | metalloprotease TldD | 0.27 | KEDOAH_19585 | cyoE | heme o synthase | — | — |
| Escherichia coli ECOR27 | 0.55 | NOLOHH_09555 | tldD | metalloprotease TldD | 0.27 | NOLOHH_01315 | cyoE | heme o synthase | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.55 | HER17_RS20140 | | metalloprotease TldD | 0.27 | HER17_RS15895 | | heme o synthase | low | > 75 |
| Enterobacter asburiae PDN3 | 0.54 | EX28DRAFT_3295 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.26 | EX28DRAFT_2543 | | protoheme IX farnesyltransferase | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.54 | LU632_RS21420 | tldD | metalloprotease TldD | 0.27 | LU632_RS18395 | cyoE | heme o synthase | — | — |
| Magnetospirillum magneticum AMB-1 | 0.54 | AMB_RS21030 | | metalloprotease TldD | 0.20 | AMB_RS03800 | | protoheme IX farnesyltransferase 1 | low | > 64 |
| Rahnella sp. WP5 | 0.54 | EX31_RS12265 | | metalloprotease TldD | 0.26 | EX31_RS22200 | | protoheme IX farnesyltransferase | low | > 89 |
| Sphingomonas koreensis DSMZ 15582 | 0.54 | Ga0059261_2252 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.31 | Ga0059261_2005 | | protoheme IX farnesyltransferase | low | > 68 |
| Azospirillum brasilense Sp245 | 0.52 | AZOBR_RS10600 | | peptidase C69 | 0.30 | AZOBR_RS10580 | | protoheme IX farnesyltransferase | low | > 97 |
| Azospirillum sp. SherDot2 | 0.52 | MPMX19_00882 | | Metalloprotease TldD | 0.31 | MPMX19_00886 | | Protoheme IX farnesyltransferase | — | — |
| Kangiella aquimarina DSM 16071 | 0.52 | B158DRAFT_2072 | | microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 | 0.42 | B158DRAFT_0671 | | protoheme IX farnesyltransferase | low | > 40 |
| Caulobacter crescentus NA1000 | 0.51 | CCNA_03522 | | Zn-dependent protease TldD | 0.31 | CCNA_03516 | | protoheme IX farnesyltransferase coxE | low | > 66 |
| Rhizobium sp. OAE497 | 0.51 | ABIE40_RS04050 | | metalloprotease TldD | 0.32 | ABIE40_RS04070 | | heme o synthase | low | > 107 |
| Caulobacter crescentus NA1000 Δfur | 0.51 | CCNA_03522 | | Zn-dependent protease TldD | 0.31 | CCNA_03516 | | protoheme IX farnesyltransferase coxE | low | > 67 |
| Agrobacterium fabrum C58 | 0.50 | Atu0765 | | TldD | 0.32 | Atu0769 | | protoheme IX farnesyltransferase | low | > 89 |
| Sinorhizobium meliloti 1021 | 0.50 | SMc00960 | | hypothetical protein | 0.32 | SMc00450 | | protoheme IX farnesyltransferase | low | > 103 |
| Rhodopseudomonas palustris CGA009 | 0.50 | TX73_004255 | | metalloprotease TldD | 0.31 | TX73_004295 | | heme o synthase | low | > 86 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.49 | A4249_RS10860 | | metalloprotease TldD | 0.34 | A4249_RS00115 | | heme o synthase | low | > 48 |
| Phaeobacter inhibens DSM 17395 | 0.49 | PGA1_c06240 | | protein TldD | 0.29 | PGA1_c06260 | | protoheme IX farnesyltransferase CtaB | — | — |
| Dinoroseobacter shibae DFL-12 | 0.48 | Dshi_1139 | | peptidase U62 modulator of DNA gyrase (RefSeq) | 0.31 | Dshi_1141 | | protoheme IX farnesyltransferase (RefSeq) | low | > 64 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.07 | CA264_16655 | | TldD protein | 0.25 | CA264_01325 | | protoheme IX farnesyltransferase | — | — |
Not shown: 9 genomes with orthologs for GFF4449 only; 7 genomes with orthologs for GFF2307 only