| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 1.0 | GFF3058 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | 1.0 | GFF2221 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | 0.82 | 19 |
| Escherichia coli ECOR38 | 0.93 | HEPCGN_18540 | hemW | radical SAM family heme chaperone HemW | 0.93 | HEPCGN_12735 | glnL | nitrogen regulation protein NR(II) | low | > 87 |
| Escherichia coli BW25113 | 0.93 | b2955 | yggW | coproporphyrinogen III oxidase (NCBI) | 0.94 | b3869 | glnL | sensory histidine kinase in two-component regulatory system with GlnG (NCBI) | low | > 76 |
| Escherichia fergusonii Becca | 0.93 | EFB2_00947 | | Heme chaperone HemW | 0.93 | EFB2_04747 | | Sensory histidine kinase/phosphatase NtrB | low | > 86 |
| Enterobacter sp. TBS_079 | 0.92 | MPMX20_03813 | | Heme chaperone HemW | 0.92 | MPMX20_04596 | | Sensory histidine kinase/phosphatase NtrB | low | > 85 |
| Escherichia coli BL21 | 0.92 | ECD_02785 | | HemN family putative oxidoreductase | 0.94 | ECD_03754 | | sensory histidine kinase in two-component regulatory system with GlnG | low | > 61 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.92 | OHPLBJKB_00761 | | Oxygen-independent coproporphyrinogen-III oxidase-like protein YqeR | 0.94 | OHPLBJKB_04183 | | Sensory histidine kinase/phosphatase NtrB | low | > 73 |
| Escherichia coli ECRC98 | 0.92 | JDDGAC_22865 | hemW | radical SAM family heme chaperone HemW | 0.94 | JDDGAC_17730 | glnL | nitrogen regulation protein NR(II) | low | > 86 |
| Escherichia coli ECRC101 | 0.92 | MCAODC_09755 | hemW | radical SAM family heme chaperone HemW | 0.94 | MCAODC_04605 | glnL | nitrogen regulation protein NR(II) | low | > 87 |
| Escherichia coli ECRC62 | 0.92 | BNILDI_09685 | hemW | radical SAM family heme chaperone HemW | 0.94 | BNILDI_05295 | glnL | nitrogen regulation protein NR(II) | low | > 75 |
| Escherichia coli ECRC102 | 0.92 | NIAGMN_17000 | hemW | radical SAM family heme chaperone HemW | 0.94 | NIAGMN_11860 | glnL | nitrogen regulation protein NR(II) | — | — |
| Escherichia coli ECOR27 | 0.92 | NOLOHH_11105 | hemW | radical SAM family heme chaperone HemW | 0.93 | NOLOHH_06235 | glnL | nitrogen regulation protein NR(II) | low | > 75 |
| Escherichia coli Nissle 1917 | 0.92 | ECOLIN_RS16435 | | radical SAM family heme chaperone HemW | 0.93 | ECOLIN_RS22300 | | nitrogen regulation protein NR(II) | low | > 55 |
| Escherichia coli ECRC99 | 0.92 | KEDOAH_08905 | hemW | radical SAM family heme chaperone HemW | 0.94 | KEDOAH_14045 | glnL | nitrogen regulation protein NR(II) | — | — |
| Escherichia coli ECRC100 | 0.92 | OKFHMN_19235 | hemW | radical SAM family heme chaperone HemW | 0.94 | OKFHMN_14105 | glnL | nitrogen regulation protein NR(II) | low | > 80 |
| Enterobacter asburiae PDN3 | 0.92 | EX28DRAFT_2993 | | putative oxygen-independent coproporphyrinogen III oxidase | 0.92 | EX28DRAFT_4351 | | Signal transduction histidine kinase, nitrogen specific | low | > 76 |
| Klebsiella michiganensis M5al | 0.88 | BWI76_RS24120 | | YggW family oxidoreductase | 0.94 | BWI76_RS00390 | | two-component system sensor histidine kinase NtrB | low | > 92 |
| Serratia liquefaciens MT49 | 0.84 | IAI46_21435 | | radical SAM family heme chaperone HemW | 0.88 | IAI46_24955 | | nitrogen regulation protein NR(II) | low | > 86 |
| Dickeya dadantii 3937 | 0.83 | DDA3937_RS17325 | | radical SAM family heme chaperone HemW | 0.84 | DDA3937_RS00130 | | nitrogen regulation protein NR(II) | low | > 74 |
| Dickeya dianthicola 67-19 | 0.83 | HGI48_RS17370 | | radical SAM family heme chaperone HemW | 0.84 | HGI48_RS21230 | | nitrogen regulation protein NR(II) | low | > 71 |
| Dickeya dianthicola ME23 | 0.83 | DZA65_RS18460 | | radical SAM family heme chaperone HemW | 0.84 | DZA65_RS22205 | | nitrogen regulation protein NR(II) | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.83 | HER17_RS03785 | | radical SAM family heme chaperone HemW | 0.84 | HER17_RS21435 | | nitrogen regulation protein NR(II) | low | > 75 |
| Rahnella sp. WP5 | 0.82 | EX31_RS02710 | | radical SAM family heme chaperone HemW | 0.87 | EX31_RS15875 | | nitrogen regulation protein NR(II) | low | > 89 |
| Pantoea sp. MT58 | 0.81 | IAI47_03580 | | radical SAM family heme chaperone HemW | 0.88 | IAI47_00455 | | nitrogen regulation protein NR(II) | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.79 | LU632_RS05445 | hemW | radical SAM family heme chaperone HemW | 0.90 | LU632_RS22140 | glnL | nitrogen regulation protein NR(II) | low | > 74 |
| Vibrio cholerae E7946 ATCC 55056 | 0.68 | CSW01_02425 | | YggW family oxidoreductase | 0.56 | CSW01_13860 | | nitrogen regulation protein NR(II) | low | > 62 |
| Shewanella loihica PV-4 | 0.61 | Shew_1131 | | putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) | 0.46 | Shew_3560 | | signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) | low | > 60 |
| Alteromonas macleodii MIT1002 | 0.60 | MIT1002_00939 | | Oxygen-independent coproporphyrinogen-III oxidase 1 | 0.43 | MIT1002_03185 | | Nitrogen regulation protein NR(II) | low | > 70 |
| Shewanella sp. ANA-3 | 0.59 | Shewana3_1188 | | putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) | 0.48 | Shewana3_0259 | | signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.59 | SO3359 | | oxygen-independent coproporphyrinogen III oxidase, putative (NCBI ptt file) | 0.47 | SO4471 | ntrB | nitrogen regulation protein (NCBI ptt file) | low | > 76 |
| Shewanella amazonensis SB2B | 0.58 | Sama_2483 | | oxygen-independent coproporphyrinogen III oxidase, putative (RefSeq) | 0.46 | Sama_3426 | | nitrogen regulation protein (RefSeq) | low | > 62 |
| Pseudomonas fluorescens SBW25 | 0.54 | PFLU_RS28405 | | radical SAM family heme chaperone HemW | 0.42 | PFLU_RS01690 | | nitrogen regulation protein NR(II) | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.54 | PFLU_RS28405 | | radical SAM family heme chaperone HemW | 0.42 | PFLU_RS01690 | | nitrogen regulation protein NR(II) | low | > 109 |
| Pseudomonas fluorescens FW300-N2E2 | 0.54 | Pf6N2E2_4593 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | 0.42 | Pf6N2E2_3825 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 103 |
| Pseudomonas simiae WCS417 | 0.54 | PS417_26760 | | oxidase | 0.42 | PS417_01640 | | histidine kinase | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.54 | AO353_08200 | | coproporphyrinogen III oxidase | 0.41 | AO353_12150 | | histidine kinase | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.54 | Pf1N1B4_2334 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | 0.42 | Pf1N1B4_1610 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.53 | PfGW456L13_1003 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | 0.42 | PfGW456L13_346 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 87 |
| Pseudomonas sp. S08-1 | 0.53 | OH686_11020 | | Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW | 0.42 | OH686_10635 | | Nitrogen regulation protein NtrB | low | > 80 |
| Kangiella aquimarina DSM 16071 | 0.53 | B158DRAFT_0201 | | coproporphyrinogen III oxidase, anaerobic (EC 1.3.99.22) | 0.28 | B158DRAFT_0715 | | Signal transduction histidine kinase, nitrogen specific | low | > 40 |
| Pseudomonas sp. RS175 | 0.53 | PFR28_04249 | | Heme chaperone HemW | 0.42 | PFR28_04945 | | Sensory histidine kinase/phosphatase NtrB | low | > 88 |
| Pseudomonas stutzeri RCH2 | 0.52 | Psest_0276 | | putative oxygen-independent coproporphyrinogen III oxidase | 0.40 | Psest_3931 | | Signal transduction histidine kinase, nitrogen specific | low | > 67 |
| Pseudomonas fluorescens FW300-N2C3 | 0.52 | AO356_13390 | | coproporphyrinogen III oxidase | 0.42 | AO356_09725 | | histidine kinase | low | > 104 |
| Pseudomonas putida KT2440 | 0.52 | PP_5101 | | coproporphyrinogen/heterocyclic compound oxidase (aerobic) | 0.43 | PP_5047 | | two-component system sensory histidine kinase/phosphatase GlnL/GlnG | low | > 96 |
| Pseudomonas syringae pv. syringae B728a | 0.51 | Psyr_0471 | | coproporphyrinogen III oxidase, anaerobic | 0.42 | Psyr_4821 | | PAS/PAC sensor signal transduction histidine kinase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.51 | Psyr_0471 | | coproporphyrinogen III oxidase, anaerobic | 0.42 | Psyr_4821 | | PAS/PAC sensor signal transduction histidine kinase | low | > 86 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.49 | Xcc-8004.1224.1 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | 0.22 | Xcc-8004.251.1 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 74 |
| Dechlorosoma suillum PS | 0.49 | Dsui_0491 | | putative oxygen-independent coproporphyrinogen III oxidase | 0.38 | Dsui_1050 | | signal transduction histidine kinase, nitrogen specific | low | > 51 |
| Cupriavidus basilensis FW507-4G11 | 0.48 | RR42_RS04880 | | coproporphyrinogen III oxidase | 0.34 | RR42_RS12985 | | histidine kinase | low | > 128 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.48 | H281DRAFT_04010 | | oxygen-independent coproporphyrinogen-3 oxidase | 0.32 | H281DRAFT_00453 | | two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.48 | ABIE53_003236 | | putative oxygen-independent coproporphyrinogen III oxidase | 0.33 | ABIE53_002805 | | two-component system nitrogen regulation sensor histidine kinase GlnL | low | > 113 |
| Dyella japonica UNC79MFTsu3.2 | 0.48 | ABZR86_RS11910 | | radical SAM family heme chaperone HemW | 0.25 | ABZR86_RS15510 | | ATP-binding protein | low | > 74 |
| Paraburkholderia sabiae LMG 24235 | 0.48 | QEN71_RS03635 | | radical SAM family heme chaperone HemW | 0.32 | QEN71_RS05670 | | nitrogen regulation protein NR(II) | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.48 | BPHYT_RS15335 | | coproporphyrinogen III oxidase | 0.32 | BPHYT_RS12940 | | signal transduction histidine kinase | low | > 109 |
| Lysobacter sp. OAE881 | 0.47 | ABIE51_RS17300 | | radical SAM family heme chaperone HemW | 0.25 | ABIE51_RS01365 | | ATP-binding protein | — | — |
| Rhodanobacter denitrificans MT42 | 0.47 | LRK55_RS11460 | | radical SAM family heme chaperone HemW | 0.21 | LRK55_RS07735 | | ATP-binding protein | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.47 | LRK54_RS11735 | | radical SAM family heme chaperone HemW | 0.22 | LRK54_RS07985 | | ATP-binding protein | 0.46 | 55 |
| Herbaspirillum seropedicae SmR1 | 0.46 | HSERO_RS10665 | | coproporphyrinogen III oxidase | 0.36 | HSERO_RS15685 | | histidine kinase | low | > 78 |
| Ralstonia solanacearum PSI07 | 0.46 | RPSI07_RS13830 | | oxygen-independent coproporphyrinogen III oxidase-like protein | 0.36 | RPSI07_RS17820 | | PAS domain-containing sensor histidine kinase | low | > 81 |
| Castellaniella sp019104865 MT123 | 0.46 | ABCV34_RS03525 | | radical SAM family heme chaperone HemW | 0.29 | ABCV34_RS03535 | | nitrogen regulation protein NR(II) | low | > 48 |
| Ralstonia solanacearum GMI1000 | 0.45 | RS_RS10840 | | oxygen-independent coproporphyrinogen III oxidase-like protein | 0.37 | RS_RS06315 | | PAS domain-containing sensor histidine kinase | low | > 80 |
| Ralstonia solanacearum UW163 | 0.45 | UW163_RS10365 | | oxygen-independent coproporphyrinogen III oxidase-like protein | 0.36 | UW163_RS12995 | | PAS domain-containing sensor histidine kinase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.45 | RALBFv3_RS03355 | | oxygen-independent coproporphyrinogen III oxidase-like protein | 0.36 | RALBFv3_RS15535 | | PAS domain-containing sensor histidine kinase | — | — |
| Rhodanobacter sp. FW510-T8 | 0.45 | OKGIIK_12160 | hemW | radical SAM family heme chaperone HemW | 0.24 | OKGIIK_14470 | | PAS domain-containing sensor histidine kinase | low | > 52 |
| Ralstonia sp. UNC404CL21Col | 0.45 | ABZR87_RS15265 | | radical SAM family heme chaperone HemW | 0.32 | ABZR87_RS11065 | | nitrogen regulation protein NR(II) | low | > 80 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.44 | GFF3256 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | 0.33 | GFF5270 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 90 |
| Marinobacter adhaerens HP15 | 0.44 | HP15_280 | | putative oxygen-independent coproporphyrinogen III oxidase | 0.40 | HP15_426 | | signal transduction histidine kinase, nitrogen specific, NtrB | low | > 73 |
| Acidovorax sp. GW101-3H11 | 0.42 | Ac3H11_3672 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | 0.34 | Ac3H11_4431 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 79 |
| Acinetobacter radioresistens SK82 | 0.42 | MPMX26_00308 | | Heme chaperone HemW | 0.35 | MPMX26_01293 | | Sensory histidine kinase/phosphatase NtrB | low | > 36 |
| Azospirillum brasilense Sp245 | 0.32 | AZOBR_RS02195 | | coproporphyrinogen III oxidase | 0.23 | AZOBR_RS14425 | | ATPase | low | > 97 |
| Azospirillum sp. SherDot2 | 0.31 | MPMX19_02574 | | Heme chaperone HemW | 0.24 | MPMX19_01111 | | Sensory histidine kinase/phosphatase NtrB | low | > 112 |
| Rhodospirillum rubrum S1H | 0.29 | Rru_A3639 | | Putative oxygen-independent coproporphyrinogen III oxidase (NCBI) | 0.24 | Rru_A1677 | | Signal transduction histidine kinase, nitrogen specific, NtrB (NCBI) | low | > 58 |
| Agrobacterium fabrum C58 | 0.29 | Atu0325 | | oxygen-independent coproporphyrinogen III oxidase | 0.22 | Atu1445 | | two component sensor kinase | — | — |
| Bosea sp. OAE506 | 0.28 | ABIE41_RS03305 | | radical SAM family heme chaperone HemW | 0.22 | ABIE41_RS16790 | | ATP-binding protein | low | > 77 |
| Rhodopseudomonas palustris CGA009 | 0.28 | TX73_001700 | | radical SAM family heme chaperone HemW | 0.22 | TX73_013415 | | nitrogen regulation protein NR(II) | — | — |
| Magnetospirillum magneticum AMB-1 | 0.27 | AMB_RS22770 | | radical SAM protein | 0.24 | AMB_RS11945 | | PAS domain-containing sensor histidine kinase | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.26 | Ga0059261_2753 | | putative oxygen-independent coproporphyrinogen III oxidase | 0.15 | Ga0059261_0139 | | Signal transduction histidine kinase, nitrogen specific | low | > 68 |