Conservation of cofitness between Psest_1772 and Psest_0155 in Pseudomonas stutzeri RCH2

80 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1772 Aspartate/tyrosine/aromatic aminotransferase 1.0 Psest_0155 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) 0.78 8
Pseudomonas sp. RS175 0.93 PFR28_00984 Glutamate-pyruvate aminotransferase AlaA 0.86 PFR28_04932 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase low > 88
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_261 Aspartate aminotransferase (EC 2.6.1.1) 0.88 Pf1N1B4_1624 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 87
Pseudomonas fluorescens FW300-N2E3 0.93 AO353_19150 aminotransferase 0.88 AO353_12085 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 101
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_2252 Aspartate aminotransferase (EC 2.6.1.1) 0.87 PfGW456L13_359 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) 0.41 21
Pseudomonas fluorescens FW300-N2E2 0.92 Pf6N2E2_2446 Aspartate aminotransferase (EC 2.6.1.1) 0.89 Pf6N2E2_3839 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 103
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_03090 aminotransferase 0.88 AO356_09800 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 104
Pseudomonas sp. S08-1 0.92 OH686_22575 Alanine transaminase 0.92 OH686_14590 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.91 Psyr_3615 Aminotransferase, class I and II 0.89 Psyr_4894 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 0.62 70
Pseudomonas syringae pv. syringae B728a 0.91 Psyr_3615 Aminotransferase, class I and II 0.89 Psyr_4894 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 0.45 41
Pseudomonas simiae WCS417 0.91 PS417_08560 aminotransferase 0.88 PS417_01575 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 88
Pseudomonas fluorescens SBW25 0.91 PFLU_RS08510 pyridoxal phosphate-dependent aminotransferase 0.88 PFLU_RS01620 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 109
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS08510 pyridoxal phosphate-dependent aminotransferase 0.88 PFLU_RS01620 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 109
Pseudomonas putida KT2440 0.90 PP_1872 glutamate-pyruvate aminotransferase 0.88 PP_0292 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 96
Serratia liquefaciens MT49 0.78 IAI46_17720 pyridoxal phosphate-dependent aminotransferase 0.24 IAI46_08190 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF1894 Aspartate aminotransferase (EC 2.6.1.1) 0.24 GFF3908 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) low > 78
Enterobacter asburiae PDN3 0.77 EX28DRAFT_0319 Aspartate/tyrosine/aromatic aminotransferase 0.24 EX28DRAFT_0535 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) low > 76
Enterobacter sp. TBS_079 0.77 MPMX20_03220 Glutamate-pyruvate aminotransferase AlaA 0.25 MPMX20_03006 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 0.19 64
Escherichia fergusonii Becca 0.77 EFB2_01568 Glutamate-pyruvate aminotransferase AlaA 0.24 EFB2_01832 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase low > 86
Escherichia coli BW25113 0.77 b2290 yfbQ aspartate aminotransferase (NCBI) 0.23 b2024 hisA N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase (VIMSS) 0.50 56
Escherichia coli HS(pFamp)R (ATCC 700891) 0.77 OHPLBJKB_01415 Glutamate-pyruvate aminotransferase AlaA 0.24 OHPLBJKB_01676 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase low > 73
Escherichia coli ECOR38 0.77 HEPCGN_22030 alaA alanine transaminase AlaA 0.24 HEPCGN_03200 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase low > 85
Escherichia coli Nissle 1917 0.77 ECOLIN_RS13295 alanine transaminase AlaA 0.23 ECOLIN_RS11965 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase — —
Escherichia coli ECOR27 0.77 NOLOHH_14445 alaA alanine transaminase AlaA 0.24 NOLOHH_15810 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase low > 57
Escherichia coli ECRC62 0.77 BNILDI_13365 alaA alanine transaminase AlaA 0.24 BNILDI_14720 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase — —
Klebsiella michiganensis M5al 0.77 BWI76_RS20205 aminotransferase AlaT 0.26 BWI76_RS18945 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase — —
Escherichia coli BL21 0.77 ECD_02215 glutamate-pyruvate aminotransferase; glutamic-pyruvic transaminase (GPT); alanine transaminase 0.24 ECD_01926 N-(5'-phospho-L-ribosyl-formimino)-5-amino-1- (5'-phosphoribosyl)-4-imidazolecarboxamide isomerase low > 60
Escherichia coli ECRC101 0.76 MCAODC_13865 alaA alanine transaminase AlaA 0.24 MCAODC_20445 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase — —
Pantoea sp. MT58 0.76 IAI47_06350 pyridoxal phosphate-dependent aminotransferase 0.23 IAI47_07070 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 76
Escherichia coli ECRC101 0.76 OKFHMN_22825 alaA alanine transaminase AlaA 0.24 OKFHMN_24495 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase — —
Escherichia coli ECRC99 0.76 KEDOAH_05370 alaA alanine transaminase AlaA 0.24 KEDOAH_03655 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase — —
Escherichia coli ECRC98 0.76 JDDGAC_26790 alaA alanine transaminase AlaA 0.24 JDDGAC_28605 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase — —
Escherichia coli ECRC102 0.76 NIAGMN_20595 alaA alanine transaminase AlaA 0.24 NIAGMN_22440 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase — —
Vibrio cholerae E7946 ATCC 55056 0.76 CSW01_09870 pyridoxal phosphate-dependent aminotransferase 0.23 CSW01_05770 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 62
Erwinia tracheiphila SCR3 0.75 LU632_RS07955 pyridoxal phosphate-dependent aminotransferase 0.25 LU632_RS08925 hisA 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 74
Dickeya dadantii 3937 0.75 DDA3937_RS14345 pyridoxal phosphate-dependent aminotransferase 0.26 DDA3937_RS09715 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 74
Dickeya dianthicola ME23 0.75 DZA65_RS14995 pyridoxal phosphate-dependent aminotransferase 0.26 DZA65_RS10035 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase — —
Pectobacterium carotovorum WPP14 0.75 HER17_RS07115 pyridoxal phosphate-dependent aminotransferase 0.27 HER17_RS12250 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 75
Dickeya dianthicola 67-19 0.75 HGI48_RS14320 pyridoxal phosphate-dependent aminotransferase 0.26 HGI48_RS09725 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase — —
Rahnella sp. WP5 0.74 EX31_RS19445 pyridoxal phosphate-dependent aminotransferase 0.24 EX31_RS11460 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.61 34
Marinobacter adhaerens HP15 0.72 HP15_2095 aspartate aminotransferase 0.75 HP15_3010 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase — —
Shewanella amazonensis SB2B 0.71 Sama_1697 aminotransferase AlaT (RefSeq) 0.23 Sama_1946 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (RefSeq) low > 62
Herbaspirillum seropedicae SmR1 0.71 HSERO_RS10455 aminotransferase 0.60 HSERO_RS20320 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) 0.75 30
Shewanella loihica PV-4 0.71 Shew_1914 aminotransferase AlaT (RefSeq) 0.20 Shew_2202 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.70 SO2483 aspartate aminotransferase, putative (NCBI ptt file) 0.22 SO2069 hisA phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (NCBI ptt file) 0.39 68
Shewanella sp. ANA-3 0.70 Shewana3_2145 aminotransferase AlaT (RefSeq) 0.22 Shewana3_1849 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (RefSeq) low > 73
Mycobacterium tuberculosis H37Rv 0.70 Rv0337c Probable aspartate aminotransferase AspC (transaminase A) (ASPAT) 0.23 Rv1603 Probable phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA — —
Acinetobacter radioresistens SK82 0.70 MPMX26_01871 Glutamate-pyruvate aminotransferase AlaA 0.68 MPMX26_02849 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase low > 36
Dechlorosoma suillum PS 0.69 Dsui_2908 aspartate/tyrosine/aromatic aminotransferase 0.59 Dsui_1417 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase — —
Alteromonas macleodii MIT1002 0.69 MIT1002_02306 Glutamate-pyruvate aminotransferase AlaA 0.28 MIT1002_02637 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase low > 70
Paraburkholderia bryophila 376MFSha3.1 0.69 H281DRAFT_00809 alanine-synthesizing transaminase 0.60 H281DRAFT_05658 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase — —
Paraburkholderia graminis OAS925 0.69 ABIE53_002025 alanine-synthesizing transaminase 0.59 ABIE53_003696 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase — —
Cupriavidus basilensis FW507-4G11 0.69 RR42_RS12545 aminotransferase 0.60 RR42_RS18890 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase — —
Paraburkholderia sabiae LMG 24235 0.68 QEN71_RS22410 pyridoxal phosphate-dependent aminotransferase 0.59 QEN71_RS27840 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.84 26
Burkholderia phytofirmans PsJN 0.68 BPHYT_RS08950 aminotransferase 0.60 BPHYT_RS17685 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) 0.84 28
Ralstonia solanacearum GMI1000 0.68 RS_RS06650 pyridoxal phosphate-dependent aminotransferase 0.58 RS_RS14765 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase — —
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS15870 pyridoxal phosphate-dependent aminotransferase 0.58 RALBFv3_RS06820 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase — —
Ralstonia solanacearum UW163 0.68 UW163_RS13315 pyridoxal phosphate-dependent aminotransferase 0.58 UW163_RS06795 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase — —
Ralstonia solanacearum PSI07 0.67 RPSI07_RS17495 pyridoxal phosphate-dependent aminotransferase 0.59 RPSI07_RS10415 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase — —
Acidovorax sp. GW101-3H11 0.67 Ac3H11_1508 Aspartate aminotransferase (EC 2.6.1.1) 0.59 Ac3H11_4732 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) — —
Variovorax sp. SCN45 0.67 GFF2803 Alanine transaminase (EC 2.6.1.2) 0.60 GFF5351 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) — —
Variovorax sp. OAS795 0.67 ABID97_RS10885 pyridoxal phosphate-dependent aminotransferase 0.59 ABID97_RS23130 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase — —
Ralstonia sp. UNC404CL21Col 0.66 ABZR87_RS11440 pyridoxal phosphate-dependent aminotransferase 0.60 ABZR87_RS02475 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF3934 Aspartate aminotransferase (EC 2.6.1.1) 0.57 GFF1310 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) — —
Bifidobacterium breve UCC2003 0.63 BBR_RS15560 aminotransferase class V-fold PLP-dependent enzyme 0.25 BBR_RS17030 bifunctional 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase/phosphoribosylanthranilate isomerase PriA low > 34
Pontibacter actiniarum KMM 6156, DSM 19842 0.62 CA264_06065 aminotransferase 0.28 CA264_05105 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 74
Lysobacter sp. OAE881 0.43 ABIE51_RS18840 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.26 ABIE51_RS13305 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.52 44
Rhodanobacter denitrificans MT42 0.40 LRK55_RS10860 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.26 LRK55_RS01365 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 63
Rhodanobacter denitrificans FW104-10B01 0.39 LRK54_RS11155 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.26 LRK54_RS01585 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 59
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.1010.1 Aspartate aminotransferase (EC 2.6.1.1) 0.21 Xcc-8004.2944.1 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) 0.88 9
Rhodanobacter sp. FW510-T8 0.39 OKGIIK_12720 aspB aminotransferase 0.26 OKGIIK_04970 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase low > 52
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS12435 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.27 ABZR86_RS06710 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.72 57
Azospirillum sp. SherDot2 0.21 MPMX19_02392 Aspartate/prephenate aminotransferase 0.49 MPMX19_02543 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase low > 112
Brevundimonas sp. GW460-12-10-14-LB2 0.20 A4249_RS04680 pyridoxal phosphate-dependent aminotransferase 0.23 A4249_RS10710 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase — —
Rhodopseudomonas palustris CGA009 0.20 TX73_022440 pyridoxal phosphate-dependent aminotransferase 0.51 TX73_001620 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase — —
Rhizobium sp. OAE497 0.19 ABIE40_RS12925 pyridoxal phosphate-dependent aminotransferase 0.51 ABIE40_RS19445 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.85 48
Echinicola vietnamensis KMM 6221, DSM 17526 0.19 Echvi_0032 Aspartate/tyrosine/aromatic aminotransferase 0.29 Echvi_2515 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) 0.60 29
Rhodospirillum rubrum S1H 0.18 Rru_A1135 Aminotransferase, class I and II (NCBI) 0.49 Rru_A3595 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (NCBI) — —
Magnetospirillum magneticum AMB-1 0.18 AMB_RS02875 pyridoxal phosphate-dependent aminotransferase 0.48 AMB_RS22930 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.15 ABZR88_RS12100 pyridoxal phosphate-dependent aminotransferase 0.26 ABZR88_RS06860 HisA/HisF-related TIM barrel protein — —
Pedobacter sp. GW460-11-11-14-LB5 0.15 CA265_RS11675 aspartate aminotransferase 0.26 CA265_RS03615 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) 0.91 23

Not shown: 1 genomes with orthologs for Psest_1772 only; 21 genomes with orthologs for Psest_0155 only