Conservation of cofitness between Psest_0145 and Psest_1557 in Pseudomonas stutzeri RCH2

76 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0145 A/G-specific adenine glycosylase 1.0 Psest_1557 Phosphoenolpyruvate carboxylase 0.18 9
Pseudomonas sp. S08-1 0.84 OH686_14550 A/G-specific adenine glycosylase 0.69 OH686_06795 Phosphoenolpyruvate carboxylase low > 80
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_4901 A/G-specific DNA-adenine glycosylase 0.73 Psyr_1318 Phosphoenolpyruvate carboxylase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_4901 A/G-specific DNA-adenine glycosylase 0.73 Psyr_1318 Phosphoenolpyruvate carboxylase low > 86
Pseudomonas simiae WCS417 0.81 PS417_01545 adenine glycosylase 0.72 PS417_06060 phosphoenolpyruvate carboxylase low > 88
Pseudomonas putida KT2440 0.81 PP_0286 adenine glycosylase 0.70 PP_1505 Phosphoenolpyruvate carboxylase low > 96
Pseudomonas fluorescens FW300-N2E3 0.81 AO353_12050 A/G-specific adenine glycosylase 0.72 AO353_16310 phosphoenolpyruvate carboxylase low > 101
Pseudomonas fluorescens SBW25-INTG 0.81 PFLU_RS01590 A/G-specific adenine glycosylase 0.72 PFLU_RS06130 phosphoenolpyruvate carboxylase low > 109
Pseudomonas fluorescens SBW25 0.81 PFLU_RS01590 A/G-specific adenine glycosylase 0.72 PFLU_RS06130 phosphoenolpyruvate carboxylase low > 109
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_1631 A/G-specific adenine glycosylase (EC 3.2.2.-) 0.72 Pf1N1B4_3051 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) low > 87
Pseudomonas sp. RS175 0.79 PFR28_04925 Adenine DNA glycosylase 0.72 PFR28_00368 Phosphoenolpyruvate carboxylase low > 88
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_3846 A/G-specific adenine glycosylase (EC 3.2.2.-) 0.72 Pf6N2E2_3103 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) low > 103
Pseudomonas fluorescens FW300-N2C3 0.78 AO356_09830 A/G-specific adenine glycosylase 0.72 AO356_06185 phosphoenolpyruvate carboxylase low > 104
Pseudomonas fluorescens GW456-L13 0.78 PfGW456L13_366 A/G-specific adenine glycosylase (EC 3.2.2.-) 0.71 PfGW456L13_4740 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) low > 87
Shewanella oneidensis MR-1 0.53 SO3368 mutY A/G-specific adenine glycosylase (NCBI ptt file) 0.54 SO0274 ppc phosphoenolpyruvate carboxylase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.52 Shew_1123 A/G-specific adenine glycosylase (RefSeq) 0.51 Shew_0200 phosphoenolpyruvate carboxylase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.52 MIT1002_00239 A/G-specific adenine glycosylase 0.48 MIT1002_03491 Phosphoenolpyruvate carboxylase low > 70
Shewanella amazonensis SB2B 0.52 Sama_2490 A/G-specific adenine glycosylase (RefSeq) 0.52 Sama_0254 phosphoenolpyruvate carboxylase (RefSeq) low > 62
Shewanella sp. ANA-3 0.51 Shewana3_1181 A/G-specific DNA-adenine glycosylase (RefSeq) 0.54 Shewana3_3906 phosphoenolpyruvate carboxylase (RefSeq) low > 73
Enterobacter sp. TBS_079 0.50 MPMX20_03818 Adenine DNA glycosylase 0.50 MPMX20_04524 Phosphoenolpyruvate carboxylase low > 85
Klebsiella michiganensis M5al 0.50 BWI76_RS24155 A/G-specific adenine glycosylase 0.51 BWI76_RS00835 phosphoenolpyruvate carboxylase low > 92
Serratia liquefaciens MT49 0.50 IAI46_21465 A/G-specific adenine glycosylase 0.51 IAI46_24525 phosphoenolpyruvate carboxylase low > 86
Escherichia coli ECRC99 0.50 KEDOAH_08940 mutY A/G-specific adenine glycosylase 0.51 KEDOAH_14565 ppc phosphoenolpyruvate carboxylase — —
Escherichia coli ECOR38 0.50 HEPCGN_18470 mutY A/G-specific adenine glycosylase 0.51 HEPCGN_12240 ppc phosphoenolpyruvate carboxylase low > 85
Escherichia coli ECRC102 0.50 NIAGMN_16965 mutY A/G-specific adenine glycosylase 0.51 NIAGMN_11345 ppc phosphoenolpyruvate carboxylase — —
Escherichia coli ECRC101 0.50 OKFHMN_19200 mutY A/G-specific adenine glycosylase 0.51 OKFHMN_13595 ppc phosphoenolpyruvate carboxylase — —
Escherichia coli ECRC98 0.50 JDDGAC_22830 mutY A/G-specific adenine glycosylase 0.51 JDDGAC_17220 ppc phosphoenolpyruvate carboxylase — —
Escherichia coli ECOR27 0.50 NOLOHH_11060 mutY A/G-specific adenine glycosylase 0.51 NOLOHH_05740 ppc phosphoenolpyruvate carboxylase low > 57
Escherichia coli ECRC62 0.50 BNILDI_09645 mutY A/G-specific adenine glycosylase 0.51 BNILDI_05785 ppc phosphoenolpyruvate carboxylase — —
Escherichia coli ECRC101 0.50 MCAODC_09720 mutY A/G-specific adenine glycosylase 0.51 MCAODC_04095 ppc phosphoenolpyruvate carboxylase — —
Escherichia coli BL21 0.50 ECD_02791 adenine DNA glycosylase 0.51 ECD_03841 phosphoenolpyruvate carboxylase low > 60
Escherichia coli BW25113 0.50 b2961 mutY adenine DNA glycosylase (NCBI) 0.51 b3956 ppc phosphoenolpyruvate carboxylase (NCBI) 0.15 69
Escherichia fergusonii Becca 0.50 EFB2_00941 Adenine DNA glycosylase 0.51 EFB2_04658 Phosphoenolpyruvate carboxylase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_00755 Adenine DNA glycosylase 0.51 OHPLBJKB_04094 Phosphoenolpyruvate carboxylase low > 73
Escherichia coli Nissle 1917 0.50 ECOLIN_RS16470 A/G-specific adenine glycosylase 0.51 ECOLIN_RS22835 phosphoenolpyruvate carboxylase low > 52
Enterobacter asburiae PDN3 0.50 EX28DRAFT_2998 A/G-specific DNA-adenine glycosylase (EC 3.2.2.-) 0.50 EX28DRAFT_4418 Phosphoenolpyruvate carboxylase, type 1 (EC 4.1.1.31) low > 76
Dickeya dadantii 3937 0.49 DDA3937_RS04900 A/G-specific adenine glycosylase 0.51 DDA3937_RS20360 phosphoenolpyruvate carboxylase low > 74
Rahnella sp. WP5 0.49 EX31_RS02735 A/G-specific adenine glycosylase 0.50 EX31_RS14200 phosphoenolpyruvate carboxylase low > 89
Pectobacterium carotovorum WPP14 0.49 HER17_RS16625 A/G-specific adenine glycosylase 0.51 HER17_RS20655 phosphoenolpyruvate carboxylase low > 75
Marinobacter adhaerens HP15 0.49 HP15_3015 A/G-specific adenine glycosylase-like protein 0.51 HP15_795 phosphoenolpyruvate carboxylase low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF3065 A/G-specific adenine glycosylase (EC 3.2.2.-) 0.51 GFF2342 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) low > 78
Erwinia tracheiphila SCR3 0.49 LU632_RS05420 mutY A/G-specific adenine glycosylase 0.50 LU632_RS19625 ppc phosphoenolpyruvate carboxylase low > 74
Pantoea sp. MT58 0.48 IAI47_03560 A/G-specific adenine glycosylase 0.50 IAI47_00895 phosphoenolpyruvate carboxylase low > 76
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_02565 mutY A/G-specific adenine glycosylase 0.23 OKGIIK_11820 ppc phosphoenolpyruvate carboxylase low > 52
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_02410 adenine DNA glycosylase 0.50 CSW01_13390 phosphoenolpyruvate carboxylase low > 62
Dickeya dianthicola ME23 0.48 DZA65_RS05245 A/G-specific adenine glycosylase 0.50 DZA65_RS00895 phosphoenolpyruvate carboxylase low > 75
Dickeya dianthicola 67-19 0.48 HGI48_RS04910 A/G-specific adenine glycosylase 0.51 HGI48_RS00850 phosphoenolpyruvate carboxylase low > 71
Rhodanobacter denitrificans FW104-10B01 0.47 LRK54_RS13325 A/G-specific adenine glycosylase 0.23 LRK54_RS12075 phosphoenolpyruvate carboxylase low > 59
Paraburkholderia graminis OAS925 0.47 ABIE53_000712 A/G-specific adenine glycosylase 0.24 ABIE53_001314 phosphoenolpyruvate carboxylase low > 113
Rhodanobacter denitrificans MT42 0.47 LRK55_RS13065 A/G-specific adenine glycosylase 0.23 LRK55_RS11810 phosphoenolpyruvate carboxylase low > 63
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_01933 A/G-specific DNA-adenine glycosylase 0.24 H281DRAFT_00197 Phosphoenolpyruvate carboxylase, type 1 0.27 45
Ralstonia solanacearum UW163 0.46 UW163_RS02445 A/G-specific adenine glycosylase 0.24 UW163_RS09420 phosphoenolpyruvate carboxylase — —
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS11135 A/G-specific adenine glycosylase 0.24 RALBFv3_RS04250 phosphoenolpyruvate carboxylase low > 76
Ralstonia solanacearum PSI07 0.45 RPSI07_RS22165 A/G-specific adenine glycosylase 0.24 RPSI07_RS13100 phosphoenolpyruvate carboxylase low > 81
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS07025 A/G-specific adenine glycosylase 0.24 ABZR87_RS16140 phosphoenolpyruvate carboxylase low > 80
Ralstonia solanacearum GMI1000 0.45 RS_RS01985 A/G-specific adenine glycosylase 0.24 RS_RS11840 phosphoenolpyruvate carboxylase low > 80
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS02875 adenine glycosylase 0.23 BPHYT_RS05225 phosphoenolpyruvate carboxylase low > 109
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS19975 A/G-specific adenine glycosylase 0.23 ABZR86_RS11555 phosphoenolpyruvate carboxylase low > 74
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS01725 A/G-specific adenine glycosylase 0.22 QEN71_RS24955 phosphoenolpyruvate carboxylase low > 153
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS19540 adenine glycosylase 0.23 HSERO_RS14670 phosphoenolpyruvate carboxylase low > 78
Xanthomonas campestris pv. campestris strain 8004 0.43 Xcc-8004.2122.1 A/G-specific adenine glycosylase (EC 3.2.2.-) 0.25 Xcc-8004.4314.1 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) low > 74
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS02050 adenine glycosylase 0.23 RR42_RS15905 phosphoenolpyruvate carboxylase low > 128
Lysobacter sp. OAE881 0.42 ABIE51_RS15140 A/G-specific adenine glycosylase 0.22 ABIE51_RS18965 phosphoenolpyruvate carboxylase low > 62
Dechlorosoma suillum PS 0.40 Dsui_0998 A/G-specific adenine glycosylase 0.26 Dsui_1603 phosphoenolpyruvate carboxylase — —
Variovorax sp. SCN45 0.38 GFF2355 A/G-specific adenine glycosylase (EC 3.2.2.-) 0.23 GFF3838 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) low > 127
Acinetobacter radioresistens SK82 0.38 MPMX26_02995 Adenine DNA glycosylase 0.50 MPMX26_03013 Phosphoenolpyruvate carboxylase low > 36
Variovorax sp. OAS795 0.38 ABID97_RS23715 A/G-specific adenine glycosylase 0.23 ABID97_RS08220 phosphoenolpyruvate carboxylase low > 91
Acidovorax sp. GW101-3H11 0.36 Ac3H11_3458 A/G-specific adenine glycosylase (EC 3.2.2.-) 0.24 Ac3H11_3553 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) low > 79
Castellaniella sp019104865 MT123 0.35 ABCV34_RS10845 A/G-specific adenine glycosylase 0.22 ABCV34_RS14805 phosphoenolpyruvate carboxylase low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.33 GFF827 A/G-specific adenine glycosylase (EC 3.2.2.-) 0.25 GFF115 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) low > 90
Synechococcus elongatus PCC 7942 0.31 Synpcc7942_0673 mutT A/G-specific DNA-adenine glycosylase 0.24 Synpcc7942_2252 ppc phosphoenolpyruvate carboxylase — —
Azospirillum sp. SherDot2 0.30 MPMX19_04892 Adenine DNA glycosylase 0.27 MPMX19_06050 Phosphoenolpyruvate carboxylase low > 112
Rhodopseudomonas palustris CGA009 0.28 TX73_023285 A/G-specific adenine glycosylase 0.25 TX73_009115 phosphoenolpyruvate carboxylase low > 86
Sphingomonas koreensis DSMZ 15582 0.27 Ga0059261_2317 A/G-specific DNA-adenine glycosylase (EC 3.2.2.-) 0.23 Ga0059261_2719 Phosphoenolpyruvate carboxylase, type 1 (EC 4.1.1.31) low > 68
Brevundimonas sp. GW460-12-10-14-LB2 0.27 A4249_RS01570 A/G-specific adenine glycosylase 0.23 A4249_RS12510 phosphoenolpyruvate carboxylase low > 48
Caulobacter crescentus NA1000 0.23 CCNA_00381 A/G-specific adenine DNA glycosylase 0.21 CCNA_01560 phosphoenolpyruvate carboxylase low > 66
Caulobacter crescentus NA1000 Δfur 0.23 CCNA_00381 A/G-specific adenine DNA glycosylase 0.21 CCNA_01560 phosphoenolpyruvate carboxylase low > 67

Not shown: 13 genomes with orthologs for Psest_0145 only; 5 genomes with orthologs for Psest_1557 only