Conservation of cofitness between Psest_1058 and Psest_1506 in Pseudomonas stutzeri RCH2

78 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1058 ribosomal-protein-alanine acetyltransferase 1.0 Psest_1506 queuosine biosynthesis protein QueC 0.27 3
Pseudomonas putida KT2440 0.83 PP_0697 ribosomal-protein-S18-alanine N-acetyltransferase 0.87 PP_1226 pre-queuosine 0 synthase 0.34 34
Pseudomonas fluorescens FW300-N2E3 0.81 AO353_14585 ribosomal-protein-alanine acetyltransferase 0.88 AO353_03535 7-cyano-7-deazaguanine synthase low > 101
Pseudomonas fluorescens SBW25-INTG 0.80 PFLU_RS03395 ribosomal-protein-alanine N-acetyltransferase 0.86 PFLU_RS24040 7-cyano-7-deazaguanine synthase QueC low > 109
Pseudomonas simiae WCS417 0.80 PS417_03300 alanine acetyltransferase 0.87 PS417_22400 7-cyano-7-deazaguanine synthase 0.19 31
Pseudomonas fluorescens FW300-N2C3 0.80 AO356_16260 ribosomal-protein-alanine acetyltransferase 0.88 AO356_18070 7-cyano-7-deazaguanine synthase low > 104
Pseudomonas fluorescens FW300-N2E2 0.80 Pf6N2E2_5188 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) 0.89 Pf6N2E2_5546 Queuosine Biosynthesis QueC ATPase low > 103
Pseudomonas fluorescens SBW25 0.80 PFLU_RS03395 ribosomal-protein-alanine N-acetyltransferase 0.86 PFLU_RS24040 7-cyano-7-deazaguanine synthase QueC low > 109
Pseudomonas fluorescens GW456-L13 0.80 PfGW456L13_1551 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) 0.85 PfGW456L13_1862 Queuosine Biosynthesis QueC ATPase 0.43 7
Pseudomonas sp. RS175 0.79 PFR28_03681 [Ribosomal protein S18]-alanine N-acetyltransferase 0.88 PFR28_03403 7-cyano-7-deazaguanine synthase low > 88
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_2891 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) 0.87 Pf1N1B4_628 Queuosine Biosynthesis QueC ATPase low > 87
Pseudomonas sp. S08-1 0.74 OH686_08035 ribosomal-protein-alanine acetyltransferase 0.85 OH686_19180 queuosine biosynthesis protein QueC 0.76 3
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_0857 [SSU ribosomal protein S18P]-alanine acetyltransferase 0.85 Psyr_1419 preQ(0) biosynthesis protein QueC low > 86
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_0857 [SSU ribosomal protein S18P]-alanine acetyltransferase 0.85 Psyr_1419 preQ(0) biosynthesis protein QueC low > 86
Dechlorosoma suillum PS 0.46 Dsui_2404 ribosomal-protein-alanine acetyltransferase 0.66 Dsui_0549 queuosine biosynthesis protein QueC low > 51
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.4455.1 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) 0.68 Xcc-8004.1450.1 Queuosine Biosynthesis QueC ATPase low > 74
Lysobacter sp. OAE881 0.45 ABIE51_RS04455 ribosomal protein S18-alanine N-acetyltransferase 0.70 ABIE51_RS05105 7-cyano-7-deazaguanine synthase QueC low > 62
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS10720 alanine acetyltransferase 0.22 HSERO_RS20880 7-cyano-7-deazaguanine synthase low > 78
Marinobacter adhaerens HP15 0.39 HP15_540 ribosomal-protein-alanine acetyltransferase 0.34 HP15_3814 ExsB protein low > 73
Serratia liquefaciens MT49 0.39 IAI46_02870 ribosomal protein S18-alanine N-acetyltransferase 0.31 IAI46_05045 7-cyano-7-deazaguanine synthase QueC low > 86
Acidovorax sp. GW101-3H11 0.39 Ac3H11_667 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) 0.23 Ac3H11_4838 Queuosine Biosynthesis QueC ATPase low > 79
Kangiella aquimarina DSM 16071 0.37 B158DRAFT_2236 [SSU ribosomal protein S18P]-alanine acetyltransferase (EC 2.3.1.128) 0.69 B158DRAFT_1146 preQ(0) biosynthesis protein QueC low > 40
Shewanella amazonensis SB2B 0.37 Sama_2596 ribosomal-protein-alanine acetyltransferase (RefSeq) 0.31 Sama_1826 ExsB protein (RefSeq) low > 62
Dickeya dianthicola 67-19 0.36 HGI48_RS03330 ribosomal protein S18-alanine N-acetyltransferase 0.33 HGI48_RS05715 7-cyano-7-deazaguanine synthase QueC low > 71
Dickeya dianthicola ME23 0.36 DZA65_RS03375 ribosomal protein S18-alanine N-acetyltransferase 0.32 DZA65_RS06040 7-cyano-7-deazaguanine synthase QueC low > 75
Rahnella sp. WP5 0.36 EX31_RS04110 ribosomal protein S18-alanine N-acetyltransferase 0.32 EX31_RS22280 7-cyano-7-deazaguanine synthase QueC low > 89
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_03460 ribosomal-protein-alanine N-acetyltransferase 0.31 CSW01_06875 7-cyano-7-deazaguanine synthase QueC low > 62
Rhodanobacter denitrificans FW104-10B01 0.35 LRK54_RS04340 ribosomal protein S18-alanine N-acetyltransferase 0.69 LRK54_RS04855 7-cyano-7-deazaguanine synthase QueC 0.55 34
Rhodanobacter denitrificans MT42 0.35 LRK55_RS04115 ribosomal protein S18-alanine N-acetyltransferase 0.69 LRK55_RS04635 7-cyano-7-deazaguanine synthase QueC low > 63
Pectobacterium carotovorum WPP14 0.35 HER17_RS18090 ribosomal protein S18-alanine N-acetyltransferase 0.32 HER17_RS15815 7-cyano-7-deazaguanine synthase QueC low > 75
Dickeya dadantii 3937 0.35 DDA3937_RS03180 ribosomal protein S18-alanine N-acetyltransferase 0.32 DDA3937_RS05670 7-cyano-7-deazaguanine synthase QueC low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF2766 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) 0.20 GFF1402 Queuosine Biosynthesis QueC ATPase low > 90
Ralstonia solanacearum PSI07 0.35 RPSI07_RS17290 ribosomal-protein-alanine N-acetyltransferase 0.70 RPSI07_RS20285 7-cyano-7-deazaguanine synthase QueC — —
Rhodanobacter sp. FW510-T8 0.35 OKGIIK_11225 rimI ribosomal protein S18-alanine N-acetyltransferase 0.68 OKGIIK_01895 queC 7-cyano-7-deazaguanine synthase QueC low > 52
Acinetobacter radioresistens SK82 0.35 MPMX26_02428 [Ribosomal protein S18]-alanine N-acetyltransferase 0.60 MPMX26_02175 7-cyano-7-deazaguanine synthase low > 36
Paraburkholderia graminis OAS925 0.35 ABIE53_002532 ribosomal-protein-alanine N-acetyltransferase 0.24 ABIE53_000396 7-cyano-7-deazaguanine synthase low > 113
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS12055 acyltransferase 0.68 RR42_RS15445 7-cyano-7-deazaguanine synthase low > 128
Ralstonia solanacearum UW163 0.34 UW163_RS13520 ribosomal-protein-alanine N-acetyltransferase 0.69 UW163_RS00625 7-cyano-7-deazaguanine synthase QueC — —
Ralstonia solanacearum IBSBF1503 0.34 RALBFv3_RS00190 ribosomal-protein-alanine N-acetyltransferase 0.69 RALBFv3_RS12940 7-cyano-7-deazaguanine synthase QueC — —
Variovorax sp. SCN45 0.34 GFF5521 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.128) 0.25 GFF5214 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) low > 127
Escherichia coli ECRC99 0.34 KEDOAH_16855 rimI ribosomal protein S18-alanine N-acetyltransferase 0.32 KEDOAH_19670 queC 7-cyano-7-deazaguanine synthase QueC — —
Escherichia coli ECRC62 0.34 BNILDI_07990 rimI ribosomal protein S18-alanine N-acetyltransferase 0.33 BNILDI_22645 queC 7-cyano-7-deazaguanine synthase QueC — —
Escherichia coli ECOR27 0.34 NOLOHH_03610 rimI ribosomal protein S18-alanine N-acetyltransferase 0.33 NOLOHH_01230 queC 7-cyano-7-deazaguanine synthase QueC low > 57
Escherichia coli Nissle 1917 0.34 ECOLIN_RS25100 ribosomal protein S18-alanine N-acetyltransferase 0.33 ECOLIN_RS02660 7-cyano-7-deazaguanine synthase QueC — —
Escherichia fergusonii Becca 0.34 EFB2_04074 [Ribosomal protein S18]-alanine N-acetyltransferase 0.33 EFB2_03613 7-cyano-7-deazaguanine synthase low > 86
Escherichia coli ECOR38 0.34 HEPCGN_09295 rimI ribosomal protein S18-alanine N-acetyltransferase 0.33 HEPCGN_06910 queC 7-cyano-7-deazaguanine synthase QueC low > 85
Escherichia coli ECRC101 0.34 MCAODC_01805 rimI ribosomal protein S18-alanine N-acetyltransferase 0.32 MCAODC_27520 queC 7-cyano-7-deazaguanine synthase QueC — —
Escherichia coli ECRC98 0.34 JDDGAC_14885 rimI ribosomal protein S18-alanine N-acetyltransferase 0.32 JDDGAC_11950 queC 7-cyano-7-deazaguanine synthase QueC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.34 OHPLBJKB_03689 Ribosomal-protein-alanine acetyltransferase 0.33 OHPLBJKB_03229 7-cyano-7-deazaguanine synthase low > 73
Escherichia coli ECRC102 0.34 NIAGMN_09140 rimI ribosomal protein S18-alanine N-acetyltransferase 0.32 NIAGMN_06350 queC 7-cyano-7-deazaguanine synthase QueC — —
Escherichia coli BW25113 0.34 b4373 rimI ribosomal-protein-alanine N-acetyltransferase (NCBI) 0.33 b0444 ybaX predicted aluminum resistance protein (NCBI) low > 76
Escherichia coli BL21 0.34 ECD_04248 ribosomal-protein-S18-alanine N-acetyltransferase 0.32 ECD_00396 7-cyano-7-deazaguanine (preQ0) synthase; queuosine biosynthesis low > 60
Escherichia coli ECRC101 0.34 OKFHMN_11290 rimI ribosomal protein S18-alanine N-acetyltransferase 0.32 OKFHMN_08295 queC 7-cyano-7-deazaguanine synthase QueC — —
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS10505 ribosomal protein S18-alanine N-acetyltransferase 0.66 ABZR86_RS10785 7-cyano-7-deazaguanine synthase QueC low > 74
Enterobacter asburiae PDN3 0.34 EX28DRAFT_3581 ribosomal-protein-alanine acetyltransferase 0.33 EX28DRAFT_2526 queuosine biosynthesis protein QueC low > 76
Paraburkholderia sabiae LMG 24235 0.33 QEN71_RS06290 ribosomal protein S18-alanine N-acetyltransferase 0.24 QEN71_RS00200 7-cyano-7-deazaguanine synthase QueC low > 153
Klebsiella michiganensis M5al 0.33 BWI76_RS04090 ribosomal-protein-alanine N-acetyltransferase RimI 0.33 BWI76_RS06560 7-cyano-7-deazaguanine synthase QueC low > 92
Pantoea sp. MT58 0.33 IAI47_16365 ribosomal protein S18-alanine N-acetyltransferase 0.32 IAI47_14620 7-cyano-7-deazaguanine synthase QueC low > 76
Enterobacter sp. TBS_079 0.31 MPMX20_00671 [Ribosomal protein S18]-alanine N-acetyltransferase 0.33 MPMX20_01035 7-cyano-7-deazaguanine synthase low > 85
Shewanella sp. ANA-3 0.30 Shewana3_0987 SSU ribosomal protein S18P alanine acetyltransferase (RefSeq) 0.29 Shewana3_2164 queuosine biosynthesis protein QueC (RefSeq) — —
Ralstonia solanacearum GMI1000 0.30 RS_RS06860 ribosomal-protein-alanine N-acetyltransferase 0.68 RS_RS03715 7-cyano-7-deazaguanine synthase — —
Erwinia tracheiphila SCR3 0.30 LU632_RS03760 rimI ribosomal protein S18-alanine N-acetyltransferase 0.30 LU632_RS18310 queC 7-cyano-7-deazaguanine synthase QueC low > 74
Shewanella oneidensis MR-1 0.30 SO1160 rimI ribosomal-protein-alanine acetyltransferase (NCBI ptt file) 0.29 SO2503 exsB exsB protein (NCBI ptt file) low > 76
Burkholderia phytofirmans PsJN 0.29 BPHYT_RS12265 alanine acetyltransferase 0.24 BPHYT_RS01500 7-cyano-7-deazaguanine synthase low > 109
Shewanella loihica PV-4 0.29 Shew_2943 ribosomal-protein-alanine acetyltransferase (RefSeq) 0.30 Shew_2062 exsB protein (RefSeq) — —
Paraburkholderia bryophila 376MFSha3.1 0.28 H281DRAFT_00584 [SSU ribosomal protein S18P]-alanine acetyltransferase 0.23 H281DRAFT_02232 preQ(0) biosynthesis protein QueC 0.37 31
Brevundimonas sp. GW460-12-10-14-LB2 0.28 A4249_RS14730 GNAT family N-acetyltransferase 0.24 A4249_RS08700 7-cyano-7-deazaguanine synthase QueC — —
Caulobacter crescentus NA1000 0.25 CCNA_00056 ribosomal-protein-S18-alanine acetyltransferase 0.25 CCNA_03262 queuosine biosynthesis protein QueC low > 66
Caulobacter crescentus NA1000 Δfur 0.25 CCNA_00056 ribosomal-protein-S18-alanine acetyltransferase 0.25 CCNA_03262 queuosine biosynthesis protein QueC low > 67
Alteromonas macleodii MIT1002 0.24 MIT1002_01178 ribosomal-protein-alanine N-acetyltransferase 0.33 MIT1002_01263 7-cyano-7-deazaguanine synthase low > 70
Agrobacterium fabrum C58 0.22 Atu0353 acetyltransferase 0.28 Atu3346 succinoglycan biosynthesis regulator low > 89
Sphingomonas koreensis DSMZ 15582 0.21 Ga0059261_1914 Acetyltransferases 0.61 Ga0059261_3209 queuosine biosynthesis protein QueC low > 68
Azospirillum sp. SherDot2 0.21 MPMX19_02604 Mycothiol acetyltransferase 0.61 MPMX19_00425 7-cyano-7-deazaguanine synthase low > 112
Rhodopseudomonas palustris CGA009 0.20 TX73_002340 ribosomal protein S18-alanine N-acetyltransferase 0.24 TX73_014550 7-cyano-7-deazaguanine synthase QueC low > 86
Sinorhizobium meliloti 1021 0.20 SMc01117 acetyltransferase 0.29 SM_b20940 hypothetical protein — —
Desulfovibrio vulgaris Hildenborough JW710 0.19 DVU1678 rimI ribosomal-protein-alanine acetyltransferase (TIGR) 0.23 DVU2659 exsB protein (TIGR) low > 55
Magnetospirillum magneticum AMB-1 0.18 AMB_RS22555 N-acetyltransferase 0.61 AMB_RS20345 7-cyano-7-deazaguanine synthase low > 64
Bacteroides thetaiotaomicron VPI-5482 0.17 BT1473 conserved hypothetical protein (NCBI ptt file) 0.27 BT1566 putative aluminum resistance protein (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.17 BACOVA_04204 ribosomal-protein-alanine acetyltransferase 0.27 BACOVA_04309 protein ExsB low > 94

Not shown: 4 genomes with orthologs for Psest_1058 only; 15 genomes with orthologs for Psest_1506 only