Conservation of cofitness between ECD_03780 and ECD_02736 in Escherichia coli BL21

73 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03780 formate dehydrogenase formation protein 1.0 ECD_02736 glycine cleavage complex lipoylprotein 0.40 18
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_04155 Sulfur carrier protein FdhD 1.00 OHPLBJKB_00811 Glycine cleavage system H protein low > 73
Escherichia coli BW25113 0.99 b3895 fdhD formate dehydrogenase accessory protein (NCBI) 1.00 b2904 gcvH glycine cleavage system protein H (NCBI) low > 76
Escherichia coli ECRC101 0.99 MCAODC_04450 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 1.00 MCAODC_10045 gcvH glycine cleavage system protein GcvH — —
Escherichia coli ECRC101 0.99 OKFHMN_13950 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 1.00 OKFHMN_19525 gcvH glycine cleavage system protein GcvH — —
Escherichia coli ECOR38 0.99 HEPCGN_12585 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 0.99 HEPCGN_18815 gcvH glycine cleavage system protein GcvH low > 85
Escherichia coli ECRC102 0.99 NIAGMN_11705 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 1.00 NIAGMN_17290 gcvH glycine cleavage system protein GcvH — —
Escherichia coli ECRC99 0.99 KEDOAH_14205 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 1.00 KEDOAH_08615 gcvH glycine cleavage system protein GcvH — —
Escherichia coli ECOR27 0.99 NOLOHH_06070 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 1.00 NOLOHH_11440 gcvH glycine cleavage system protein GcvH low > 57
Escherichia coli ECRC62 0.99 BNILDI_05455 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 1.00 BNILDI_09975 gcvH glycine cleavage system protein GcvH — —
Escherichia fergusonii Becca 0.99 EFB2_04720 Sulfur carrier protein FdhD 1.00 EFB2_00998 Glycine cleavage system H protein low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS22460 formate dehydrogenase accessory sulfurtransferase FdhD 1.00 ECOLIN_RS16170 glycine cleavage system protein GcvH low > 52
Escherichia coli ECRC98 0.98 JDDGAC_17575 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 1.00 JDDGAC_23165 gcvH glycine cleavage system protein GcvH — —
Klebsiella michiganensis M5al 0.83 BWI76_RS00475 sulfurtransferase FdhD 0.94 BWI76_RS23875 glycine cleavage system protein H low > 92
Enterobacter asburiae PDN3 0.78 EX28DRAFT_4379 formate dehydrogenase family accessory protein FdhD 0.96 EX28DRAFT_2956 glycine cleavage system H protein low > 76
Enterobacter sp. TBS_079 0.78 MPMX20_04574 Sulfur carrier protein FdhD 0.95 MPMX20_03763 Glycine cleavage system H protein low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF2254 Formate dehydrogenase chain D (EC 1.2.1.2) 1.00 GFF3004 Glycine cleavage system H protein low > 78
Pantoea sp. MT58 0.73 IAI47_18740 formate dehydrogenase accessory sulfurtransferase FdhD 0.83 IAI47_03770 glycine cleavage system protein GcvH low > 76
Pectobacterium carotovorum WPP14 0.72 HER17_RS21105 formate dehydrogenase accessory sulfurtransferase FdhD 0.78 HER17_RS18000 glycine cleavage system protein GcvH low > 75
Serratia liquefaciens MT49 0.71 IAI46_00205 formate dehydrogenase accessory sulfurtransferase FdhD 0.78 IAI46_20855 glycine cleavage system protein GcvH low > 86
Dickeya dadantii 3937 0.71 DDA3937_RS20955 formate dehydrogenase accessory sulfurtransferase FdhD 0.73 DDA3937_RS03250 glycine cleavage system protein GcvH low > 74
Rahnella sp. WP5 0.71 EX31_RS05780 formate dehydrogenase accessory sulfurtransferase FdhD 0.77 EX31_RS21515 glycine cleavage system protein GcvH low > 89
Dickeya dianthicola ME23 0.70 DZA65_RS00290 formate dehydrogenase accessory sulfurtransferase FdhD 0.79 DZA65_RS03440 glycine cleavage system protein GcvH low > 75
Dickeya dianthicola 67-19 0.70 HGI48_RS00290 formate dehydrogenase accessory sulfurtransferase FdhD 0.79 HGI48_RS03395 glycine cleavage system protein GcvH low > 71
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS07435 formate dehydrogenase accessory protein FdhD 0.46 HSERO_RS07915 glycine cleavage system protein H low > 78
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS03765 formate dehydrogenase 0.58 RR42_RS20065 glycine cleavage system protein H low > 128
Shewanella sp. ANA-3 0.43 Shewana3_0108 formate dehydrogenase accessory protein (RefSeq) 0.79 Shewana3_3500 glycine cleavage system protein H (RefSeq) low > 73
Shewanella oneidensis MR-1 0.43 SO0107 fdhD formate dehydrogenase accessory protein FdhD (NCBI ptt file) 0.79 SO0780 gcvH glycine cleavage system H protein (NCBI ptt file) low > 76
Marinobacter adhaerens HP15 0.41 HP15_4175 formate dehydrogenase, subunit FdhD 0.59 HP15_459 glycine cleavage H-protein, subgroup low > 73
Azospirillum brasilense Sp245 0.40 AZOBR_RS18415 formate dehydrogenase accessory protein FdhD 0.51 AZOBR_RS10465 glycine cleavage system protein H — —
Azospirillum sp. SherDot2 0.39 MPMX19_03500 Sulfur carrier protein FdhD 0.48 MPMX19_01030 Glycine cleavage system H protein low > 112
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS03590 formate dehydrogenase accessory sulfurtransferase FdhD 0.60 ABZR86_RS18880 glycine cleavage system protein GcvH low > 74
Ralstonia solanacearum UW163 0.36 UW163_RS20380 sulfurtransferase FdhD 0.55 UW163_RS04955 glycine cleavage system protein H — —
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS18750 sulfurtransferase FdhD 0.55 RALBFv3_RS08655 glycine cleavage system protein H — —
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_06437 FdhD protein 0.59 H281DRAFT_02410 glycine cleavage system H protein low > 103
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.2194.1 Formate dehydrogenase chain D (EC 1.2.1.2) 0.57 Xcc-8004.1568.1 Glycine cleavage system H protein low > 74
Ralstonia solanacearum PSI07 0.35 RPSI07_RS04845 sulfurtransferase FdhD 0.55 RPSI07_RS08580 glycine cleavage system protein H low > 81
Ralstonia solanacearum GMI1000 0.35 RS_RS22200 sulfurtransferase FdhD 0.56 RS_RS16505 glycine cleavage system protein H — —
Ralstonia sp. UNC404CL21Col 0.34 ABZR87_RS19685 formate dehydrogenase accessory sulfurtransferase FdhD 0.53 ABZR87_RS03930 glycine cleavage system protein GcvH low > 80
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS03240 formate dehydrogenase accessory protein FdhD 0.59 BPHYT_RS19325 glycine cleavage system H protein low > 109
Variovorax sp. SCN45 0.33 GFF5642 Sulfur carrier protein FdhD 0.54 GFF6477 Glycine cleavage system H protein — —
Rhizobium sp. OAE497 0.33 ABIE40_RS17840 formate dehydrogenase accessory sulfurtransferase FdhD 0.50 ABIE40_RS09945 glycine cleavage system protein GcvH low > 107
Rhodopseudomonas palustris CGA009 0.33 TX73_003800 formate dehydrogenase accessory sulfurtransferase FdhD 0.45 TX73_019930 glycine cleavage system protein GcvH low > 86
Castellaniella sp019104865 MT123 0.33 ABCV34_RS00240 formate dehydrogenase accessory sulfurtransferase FdhD 0.52 ABCV34_RS08840 glycine cleavage system protein GcvH low > 48
Paraburkholderia sabiae LMG 24235 0.33 QEN71_RS02080 formate dehydrogenase accessory sulfurtransferase FdhD 0.57 QEN71_RS29210 glycine cleavage system protein GcvH low > 153
Sinorhizobium meliloti 1021 0.32 SMc03085 formate dehydrogenase accessory protein 0.51 SMc02048 glycine cleavage system protein H low > 103
Paraburkholderia graminis OAS925 0.32 ABIE53_000787 FdhD protein 0.61 ABIE53_000237 glycine cleavage system H protein low > 113
Agrobacterium fabrum C58 0.32 Atu2619 NAD-dependent formate dehydrogenase, C subunit protein 0.54 Atu1463 glycine cleavage system component H low > 89
Lysobacter sp. OAE881 0.32 ABIE51_RS14800 formate dehydrogenase accessory sulfurtransferase FdhD 0.56 ABIE51_RS16360 glycine cleavage system protein GcvH low > 62
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_11830 formate dehydrogenase family accessory protein FdhD 0.57 AO353_08730 glycine cleavage system protein H low > 101
Pseudomonas sp. RS175 0.31 PFR28_04882 Sulfur carrier protein FdhD 0.61 PFR28_04315 Glycine cleavage system H protein low > 88
Pseudomonas putida KT2440 0.31 PP_0257 protein sulfur transferase 0.66 PP_5193 glycine cleavage system H protein 2 low > 96
Pseudomonas simiae WCS417 0.31 PS417_01270 iron ABC transporter substrate-binding protein 0.63 PS417_27250 glycine cleavage system protein H low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_4945 Formate dehydrogenase, subunit FdhD 0.61 Psyr_0247 glycine cleavage system H protein low > 86
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_4945 Formate dehydrogenase, subunit FdhD 0.61 Psyr_0247 glycine cleavage system H protein low > 86
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_1673 Formate dehydrogenase chain D (EC 1.2.1.2) 0.56 Pf1N1B4_2235 Glycine cleavage system H protein low > 87
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_408 Formate dehydrogenase chain D (EC 1.2.1.2) 0.62 PfGW456L13_903 Glycine cleavage system H protein low > 87
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_10100 formate dehydrogenase family accessory protein FdhD 0.63 AO356_13040 glycine cleavage system protein H low > 104
Pseudomonas fluorescens FW300-N2E2 0.30 Pf6N2E2_3890 Formate dehydrogenase chain D (EC 1.2.1.2) 0.66 Pf6N2E2_4486 Glycine cleavage system H protein low > 103
Pseudomonas fluorescens SBW25 0.30 PFLU_RS01365 formate dehydrogenase accessory sulfurtransferase FdhD 0.62 PFLU_RS28910 glycine cleavage system protein GcvH low > 109
Pseudomonas fluorescens SBW25-INTG 0.30 PFLU_RS01365 formate dehydrogenase accessory sulfurtransferase FdhD 0.62 PFLU_RS28910 glycine cleavage system protein GcvH low > 109
Pseudomonas stutzeri RCH2 0.28 Psest_3964 formate dehydrogenase family accessory protein FdhD 0.62 Psest_0182 glycine cleavage system H protein low > 67
Bosea sp. OAE506 0.28 ABIE41_RS15275 formate dehydrogenase accessory sulfurtransferase FdhD 0.49 ABIE41_RS22925 glycine cleavage system protein GcvH low > 77
Alteromonas macleodii MIT1002 0.27 MIT1002_01712 formate dehydrogenase accessory protein 0.72 MIT1002_02972 Glycine cleavage system H protein low > 70
Sphingomonas koreensis DSMZ 15582 0.26 Ga0059261_3871 formate dehydrogenase family accessory protein FdhD 0.49 Ga0059261_3257 glycine cleavage system H protein low > 68
Caulobacter crescentus NA1000 Δfur 0.24 CCNA_01300 formate dehydrogenase accessory protein fdhD 0.49 CCNA_03464 glycine cleavage system H protein low > 67
Caulobacter crescentus NA1000 0.24 CCNA_01300 formate dehydrogenase accessory protein fdhD 0.49 CCNA_03464 glycine cleavage system H protein low > 66
Mucilaginibacter yixingensis YX-36 DSM 26809 0.18 ABZR88_RS07865 formate dehydrogenase accessory sulfurtransferase FdhD 0.47 ABZR88_RS00300 glycine cleavage system protein GcvH — —
Mycobacterium tuberculosis H37Rv 0.17 Rv2899c Possible FdhD protein homolog 0.51 Rv1826 Probable glycine cleavage system H protein GcvH — —
Desulfovibrio vulgaris Hildenborough JW710 0.12 DVU0578 formate dehydrogenase accessory protein FdhD, putative (TIGR) 0.53 DVU1426 gcvH glycine cleavage system H protein (TIGR) low > 55
Shewanella amazonensis SB2B 0.12 Sama_3619 formate dehydrogenase accessory protein FdhD, putative (RefSeq) 0.81 Sama_2720 glycine cleavage system protein H (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.11 CSW01_07625 sulfurtransferase FdhD 0.60 CSW01_15335 glycine cleavage system protein H low > 62
Shewanella loihica PV-4 0.11 Shew_0053 formate dehydrogenase, subunit FdhD (RefSeq) 0.78 Shew_3063 glycine cleavage system protein H (RefSeq) low > 60
Acidovorax sp. GW101-3H11 0.09 Ac3H11_3797 Formate dehydrogenase chain D (EC 1.2.1.2) 0.56 Ac3H11_166 Glycine cleavage system H protein low > 79

Not shown: 0 genomes with orthologs for ECD_03780 only; 27 genomes with orthologs for ECD_02736 only