Conservation of cofitness between CSW01_05375 and CSW01_18760 in Vibrio cholerae E7946 ATCC 55056

82 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05375 recombination protein RecR 1.0 CSW01_18760 dihydroorotase 0.46 14
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.81 GFF4390 Recombination protein RecR 0.53 GFF3342 Dihydroorotase (EC 3.5.2.3) low > 78
Escherichia coli ECRC100 0.81 OKFHMN_08155 recR recombination mediator RecR 0.55 OKFHMN_03730 pyrC dihydroorotase low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.81 OHPLBJKB_03202 Recombination protein RecR 0.55 OHPLBJKB_02603 Dihydroorotase low > 73
Enterobacter asburiae PDN3 0.81 EX28DRAFT_2485 DNA replication and repair protein RecR 0.57 EX28DRAFT_1869 dihydroorotase (EC 3.5.2.3) — —
Enterobacter sp. TBS_079 0.81 MPMX20_01074 Recombination protein RecR 0.57 MPMX20_01741 Dihydroorotase low > 85
Escherichia coli ECRC62 0.81 BNILDI_22505 recR recombination mediator RecR 0.55 BNILDI_19420 pyrC dihydroorotase low > 75
Escherichia coli BW25113 0.81 b0472 recR recombination protein RecR (NCBI) 0.55 b1062 pyrC dihydroorotase (NCBI) low > 76
Escherichia coli ECRC98 0.81 JDDGAC_11805 recR recombination mediator RecR 0.55 JDDGAC_07390 pyrC dihydroorotase low > 86
Escherichia coli ECRC102 0.81 NIAGMN_06210 recR recombination mediator RecR 0.55 NIAGMN_24100 pyrC dihydroorotase — —
Escherichia coli ECOR38 0.81 HEPCGN_06770 recR recombination mediator RecR 0.55 HEPCGN_23760 pyrC dihydroorotase low > 87
Escherichia coli ECRC99 0.81 KEDOAH_19810 recR recombination mediator RecR 0.55 KEDOAH_24025 pyrC dihydroorotase — —
Escherichia fergusonii Becca 0.81 EFB2_03586 Recombination protein RecR 0.55 EFB2_02912 Dihydroorotase low > 86
Escherichia coli ECRC101 0.81 MCAODC_27380 recR recombination mediator RecR 0.55 MCAODC_23090 pyrC dihydroorotase 0.81 5
Escherichia coli Nissle 1917 0.81 ECOLIN_RS02805 recombination mediator RecR 0.55 ECOLIN_RS06160 dihydroorotase — —
Escherichia coli ECOR27 0.81 NOLOHH_01085 recR recombination mediator RecR 0.55 NOLOHH_21260 pyrC dihydroorotase low > 75
Escherichia coli BL21 0.81 ECD_00423 gap repair protein 0.55 ECD_01058 dihydro-orotase low > 61
Klebsiella michiganensis M5al 0.81 BWI76_RS06830 recombination protein RecR 0.55 BWI76_RS10990 dihydroorotase low > 92
Dickeya dadantii 3937 0.80 DDA3937_RS05790 recombination protein RecR 0.56 DDA3937_RS13170 dihydroorotase low > 74
Serratia liquefaciens MT49 0.80 IAI46_05240 recombination protein RecR 0.57 IAI46_09740 dihydroorotase low > 86
Dickeya dianthicola ME23 0.79 DZA65_RS06165 recombination protein RecR 0.55 DZA65_RS13710 dihydroorotase low > 75
Erwinia amylovora T8 0.79 OLJFJH_17805 recombination mediator RecR 0.56 OLJFJH_15670 dihydroorotase low > 58
Pectobacterium carotovorum WPP14 0.79 HER17_RS15695 recombination mediator RecR 0.56 HER17_RS08600 dihydroorotase low > 75
Dickeya dianthicola 67-19 0.79 HGI48_RS05840 recombination protein RecR 0.55 HGI48_RS13235 dihydroorotase — —
Pantoea sp. MT58 0.78 IAI47_14465 recombination protein RecR 0.54 IAI47_12215 dihydroorotase low > 76
Rahnella sp. WP5 0.78 EX31_RS22525 recombination protein RecR 0.55 EX31_RS24385 dihydroorotase low > 89
Erwinia tracheiphila SCR3 0.77 LU632_RS18105 recR recombination mediator RecR 0.57 LU632_RS10340 pyrC dihydroorotase low > 74
Shewanella sp. ANA-3 0.67 Shewana3_2444 recR recombination protein RecR (RefSeq) 0.77 Shewana3_3263 dihydroorotase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.66 SO2015 recR recombination protein RecR (NCBI ptt file) 0.75 SO3695 pyrC dihydroorotase, homodimeric type (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.65 Shew_2233 recombination protein RecR (RefSeq) 0.74 Shew_0728 dihydroorotase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.65 MIT1002_02649 Recombination protein RecR 0.61 MIT1002_03750 Dihydroorotase — —
Shewanella amazonensis SB2B 0.64 Sama_1312 recR recombination protein RecR (RefSeq) 0.77 Sama_2870 dihydroorotase (RefSeq) low > 62
Pseudomonas putida KT2440 0.59 PP_4267 Recombination protein RecR 0.66 PP_1086 dihydroorotase — —
Kangiella aquimarina DSM 16071 0.58 B158DRAFT_2480 DNA replication and repair protein RecR 0.67 B158DRAFT_1241 dihydroorotase (EC 3.5.2.3) — —
Pseudomonas sp. DMC3 0.58 GFF708 Recombination protein RecR 0.67 GFF5094 Dihydroorotase — —
Pseudomonas aeruginosa PA14 0.58 IKLFDK_07325 recombination mediator RecR 0.66 IKLFDK_18005 dihydroorotase — —
Pseudomonas sp. BP01 0.58 JOY50_RS00135 recR recombination mediator RecR 0.66 JOY50_RS14925 pyrC dihydroorotase — —
Pseudomonas sp. RS175 0.58 PFR28_01077 Recombination protein RecR 0.67 PFR28_03355 Dihydroorotase — —
Pseudomonas stutzeri RCH2 0.58 Psest_2545 recombination protein RecR 0.66 Psest_3123 dihydroorotase, homodimeric type low > 67
Pseudomonas fluorescens FW300-N2E2 0.58 Pf6N2E2_2325 Recombination protein RecR 0.66 Pf6N2E2_5588 Dihydroorotase (EC 3.5.2.3) — —
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_02495 recombination protein RecR 0.66 AO356_18315 dihydroorotase — —
Pseudomonas simiae WCS417 0.58 PS417_20800 recombination protein RecR 0.66 PS417_05630 dihydroorotase — —
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS22415 recombination protein RecR 0.66 PFLU_RS05715 dihydroorotase — —
Rhodanobacter denitrificans FW104-10B01 0.58 LRK54_RS01250 recombination mediator RecR 0.59 LRK54_RS10900 dihydroorotase — —
Pseudomonas fluorescens SBW25 0.58 PFLU_RS22415 recombination protein RecR 0.66 PFLU_RS05715 dihydroorotase — —
Pseudomonas fluorescens FW300-N1B4 0.58 Pf1N1B4_3864 Recombination protein RecR 0.67 Pf1N1B4_744 Dihydroorotase (EC 3.5.2.3) — —
Rhodanobacter denitrificans MT42 0.57 LRK55_RS01020 recombination mediator RecR 0.57 LRK55_RS10600 dihydroorotase low > 63
Pseudomonas sp. SVBP6 0.57 COO64_RS18630 recR recombination mediator RecR 0.67 COO64_RS16860 pyrC dihydroorotase — —
Rhodanobacter sp. FW510-T8 0.57 OKGIIK_05655 recR recombination mediator RecR 0.57 OKGIIK_12970 pyrC dihydroorotase — —
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_00675 recombination protein RecR 0.67 AO353_04115 dihydroorotase — —
Marinobacter adhaerens HP15 0.57 HP15_1883 recombination protein RecR 0.65 HP15_1216 dihydroorotase, homodimeric type — —
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_3396 DNA replication and repair protein RecR 0.67 Psyr_3894 dihydroorotase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_3396 DNA replication and repair protein RecR 0.67 Psyr_3894 dihydroorotase — —
Rhodanobacter sp000427505 FW510-R12 0.57 LRK53_RS08825 recombination mediator RecR 0.59 LRK53_RS03690 dihydroorotase low > 60
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_4074 Recombination protein RecR 0.67 PfGW456L13_1747 Dihydroorotase (EC 3.5.2.3) — —
Pseudomonas sp. S08-1 0.55 OH686_02385 recombination protein RecR 0.66 OH686_03940 dihydroorotase, homodimeric type — —
Dechlorosoma suillum PS 0.55 Dsui_1811 recombination protein RecR 0.60 Dsui_0250 dihydroorotase, homodimeric type — —
Methylophilus sp. DMC18 0.53 GFF1237 Recombination protein RecR 0.61 GFF2451 Dihydroorotase — —
Variovorax sp. OAS795 0.52 ABID97_RS14700 recombination mediator RecR 0.59 ABID97_RS06040 dihydroorotase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF4253 Recombination protein RecR 0.61 GFF523 Dihydroorotase (EC 3.5.2.3) low > 90
Variovorax sp. SCN45 0.52 GFF1110 Recombination protein RecR 0.59 GFF4557 Dihydroorotase (EC 3.5.2.3) low > 127
Ralstonia sp. UNC404CL21Col 0.52 ABZR87_RS10810 recombination mediator RecR 0.65 ABZR87_RS07550 dihydroorotase — —
Acinetobacter radioresistens SK82 0.52 MPMX26_01643 Recombination protein RecR 0.59 MPMX26_02262 Dihydroorotase — —
Herbaspirillum seropedicae SmR1 0.51 HSERO_RS18355 recombinase RecR 0.62 HSERO_RS19235 dihydroorotase — —
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_00834 DNA replication and repair protein RecR 0.61 H281DRAFT_04265 dihydroorotase — —
Ralstonia solanacearum PSI07 0.49 RPSI07_RS18205 recombination protein RecR 0.64 RPSI07_RS21625 dihydroorotase — —
Ralstonia solanacearum UW163 0.49 UW163_RS12640 recombination protein RecR 0.64 UW163_RS01995 dihydroorotase — —
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS22285 recombination mediator RecR 0.61 QEN71_RS26855 dihydroorotase low > 153
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS13270 recombination protein RecR 0.62 RR42_RS02610 dihydroorotase — —
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS15170 recombination protein RecR 0.64 RALBFv3_RS11590 dihydroorotase — —
Ralstonia solanacearum GMI1000 0.49 RS_RS05980 recombination protein RecR 0.65 RS_RS02420 dihydroorotase — —
Paraburkholderia graminis OAS925 0.49 ABIE53_002048 recombination protein RecR 0.62 ABIE53_003505 dihydroorotase — —
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS09070 recombination protein RecR 0.61 BPHYT_RS16675 dihydroorotase low > 109
Acidovorax sp. GW101-3H11 0.45 Ac3H11_473 Recombination protein RecR 0.62 Ac3H11_1963 Dihydroorotase (EC 3.5.2.3) — —
Castellaniella sp019104865 MT123 0.43 ABCV34_RS15480 recombination mediator RecR 0.57 ABCV34_RS09730 dihydroorotase — —
Synechocystis sp000284455 PCC 6803 0.41 SGL_RS17075 recombination mediator RecR 0.57 SGL_RS12080 dihydroorotase — —
Azospirillum sp. SherDot2 0.38 MPMX19_02195 Recombination protein RecR 0.53 MPMX19_01633 Dihydroorotase — —
Sinorhizobium meliloti 1021 0.36 SMc02908 recombination protein RecR 0.53 SMc02166 dihydroorotase low > 103
Azospirillum brasilense Sp245 0.36 AZOBR_RS03880 recombinase RecR 0.52 AZOBR_RS04460 dihydroorotase low > 97
Phaeobacter inhibens DSM 17395 0.35 PGA1_c30290 recombination protein RecR 0.52 PGA1_c10910 dihydroorotase PyrC low > 62
Agrobacterium fabrum C58 0.35 Atu0093 Recombination protein 0.53 Atu0399 dihydroorotase low > 89
Dinoroseobacter shibae DFL-12 0.34 Dshi_0648 recombination protein RecR (RefSeq) 0.51 Dshi_2371 dihydroorotase, homodimeric type (RefSeq) low > 64
Rhizobium sp. OAE497 0.33 ABIE40_RS00300 recombination mediator RecR 0.52 ABIE40_RS02105 dihydroorotase — —

Not shown: 28 genomes with orthologs for CSW01_05375 only; 0 genomes with orthologs for CSW01_18760 only