Conservation of cofitness between CSW01_01115 and CSW01_18760 in Vibrio cholerae E7946 ATCC 55056

81 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01115 ribonuclease PH 1.0 CSW01_18760 dihydroorotase 0.38 20
Dickeya dianthicola ME23 0.78 DZA65_RS00730 ribonuclease PH 0.55 DZA65_RS13710 dihydroorotase low > 75
Dickeya dianthicola 67-19 0.78 HGI48_RS00675 ribonuclease PH 0.55 HGI48_RS13235 dihydroorotase low > 71
Dickeya dadantii 3937 0.77 DDA3937_RS20540 ribonuclease PH 0.56 DDA3937_RS13170 dihydroorotase low > 74
Pectobacterium carotovorum WPP14 0.76 HER17_RS20855 ribonuclease PH 0.56 HER17_RS08600 dihydroorotase low > 75
Erwinia amylovora T8 0.75 OLJFJH_05765 ribonuclease PH 0.56 OLJFJH_15670 dihydroorotase 0.39 17
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF366 Ribonuclease PH (EC 2.7.7.56) 0.53 GFF3342 Dihydroorotase (EC 3.5.2.3) 0.53 62
Enterobacter sp. TBS_079 0.74 MPMX20_00092 Ribonuclease PH 0.57 MPMX20_01741 Dihydroorotase low > 85
Enterobacter asburiae PDN3 0.74 EX28DRAFT_3893 ribonuclease PH 0.57 EX28DRAFT_1869 dihydroorotase (EC 3.5.2.3) — —
Erwinia tracheiphila SCR3 0.73 LU632_RS22020 rph ribonuclease PH 0.57 LU632_RS10340 pyrC dihydroorotase low > 74
Escherichia coli ECRC99 0.73 KEDOAH_12555 rph ribonuclease PH 0.55 KEDOAH_24025 pyrC dihydroorotase — —
Klebsiella michiganensis M5al 0.73 BWI76_RS27390 ribonuclease PH 0.55 BWI76_RS10990 dihydroorotase 0.72 5
Escherichia coli Nissle 1917 0.73 ECOLIN_RS20755 ribonuclease PH 0.55 ECOLIN_RS06160 dihydroorotase low > 55
Escherichia coli ECRC98 0.73 JDDGAC_19215 rph ribonuclease PH 0.55 JDDGAC_07390 pyrC dihydroorotase low > 86
Serratia liquefaciens MT49 0.73 IAI46_24850 ribonuclease PH 0.57 IAI46_09740 dihydroorotase low > 86
Escherichia coli ECRC62 0.73 BNILDI_04045 rph ribonuclease PH 0.55 BNILDI_19420 pyrC dihydroorotase low > 75
Escherichia coli ECOR38 0.73 HEPCGN_14410 rph ribonuclease PH 0.55 HEPCGN_23760 pyrC dihydroorotase low > 87
Escherichia coli ECOR27 0.73 NOLOHH_07470 rph ribonuclease PH 0.55 NOLOHH_21260 pyrC dihydroorotase 0.77 12
Escherichia coli ECRC101 0.73 MCAODC_06100 rph ribonuclease PH 0.55 MCAODC_23090 pyrC dihydroorotase 0.59 52
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_00059 Ribonuclease PH 0.55 OHPLBJKB_02603 Dihydroorotase low > 73
Escherichia coli ECRC100 0.73 OKFHMN_15590 rph ribonuclease PH 0.55 OKFHMN_03730 pyrC dihydroorotase 0.81 26
Escherichia fergusonii Becca 0.73 EFB2_00170 Ribonuclease PH 0.55 EFB2_02912 Dihydroorotase low > 86
Pantoea sp. MT58 0.73 IAI47_00595 ribonuclease PH 0.54 IAI47_12215 dihydroorotase 0.68 4
Escherichia coli ECRC102 0.73 NIAGMN_13350 rph ribonuclease PH 0.55 NIAGMN_24100 pyrC dihydroorotase — —
Escherichia coli BL21 0.73 ECD_03500 ribonuclease PH 0.55 ECD_01058 dihydro-orotase 0.41 40
Rahnella sp. WP5 0.72 EX31_RS14505 ribonuclease PH 0.55 EX31_RS24385 dihydroorotase 0.72 17
Shewanella sp. ANA-3 0.71 Shewana3_3777 RNAse PH (RefSeq) 0.77 Shewana3_3263 dihydroorotase (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.71 MIT1002_04071 Ribonuclease PH 0.61 MIT1002_03750 Dihydroorotase — —
Shewanella oneidensis MR-1 0.70 SO4256 rph ribonuclease PH (NCBI ptt file) 0.75 SO3695 pyrC dihydroorotase, homodimeric type (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.70 Shew_3488 ribonuclease PH (RefSeq) 0.74 Shew_0728 dihydroorotase (RefSeq) low > 60
Escherichia coli BW25113 0.70 b3643 rph ribonuclease PH (NCBI) 0.55 b1062 pyrC dihydroorotase (NCBI) low > 76
Shewanella amazonensis SB2B 0.69 Sama_0320 tRNA nucleotidyltransferase (RefSeq) 0.77 Sama_2870 dihydroorotase (RefSeq) low > 62
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF3254 Ribonuclease PH (EC 2.7.7.56) 0.61 GFF523 Dihydroorotase (EC 3.5.2.3) low > 90
Kangiella aquimarina DSM 16071 0.66 B158DRAFT_0588 ribonuclease PH 0.67 B158DRAFT_1241 dihydroorotase (EC 3.5.2.3) — —
Pseudomonas aeruginosa PA14 0.65 IKLFDK_26785 ribonuclease PH 0.66 IKLFDK_18005 dihydroorotase — —
Pseudomonas sp. S08-1 0.64 OH686_13570 ribonuclease PH 0.66 OH686_03940 dihydroorotase, homodimeric type — —
Pseudomonas sp. SVBP6 0.64 COO64_RS01510 rph ribonuclease PH 0.67 COO64_RS16860 pyrC dihydroorotase — —
Dechlorosoma suillum PS 0.64 Dsui_0494 ribonuclease PH 0.60 Dsui_0250 dihydroorotase, homodimeric type — —
Pseudomonas sp. BP01 0.64 JOY50_RS09025 rph ribonuclease PH 0.66 JOY50_RS14925 pyrC dihydroorotase — —
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_0213 RNAse PH 0.67 Psyr_3894 dihydroorotase — —
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_2117 Ribonuclease PH (EC 2.7.7.56) 0.67 Pf1N1B4_744 Dihydroorotase (EC 3.5.2.3) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_0213 RNAse PH 0.67 Psyr_3894 dihydroorotase — —
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_09260 ribonuclease PH 0.67 AO353_04115 dihydroorotase — —
Acinetobacter radioresistens SK82 0.64 MPMX26_00040 Ribonuclease PH 0.59 MPMX26_02262 Dihydroorotase — —
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_4365 Ribonuclease PH (EC 2.7.7.56) 0.66 Pf6N2E2_5588 Dihydroorotase (EC 3.5.2.3) — —
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_784 Ribonuclease PH (EC 2.7.7.56) 0.67 PfGW456L13_1747 Dihydroorotase (EC 3.5.2.3) — —
Pseudomonas putida KT2440 0.64 PP_5294 Ribonuclease PH 0.66 PP_1086 dihydroorotase — —
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_12500 ribonuclease PH 0.66 AO356_18315 dihydroorotase — —
Marinobacter adhaerens HP15 0.64 HP15_300 ribonuclease PH 0.65 HP15_1216 dihydroorotase, homodimeric type low > 73
Pseudomonas sp. RS175 0.63 PFR28_04420 Ribonuclease PH 0.67 PFR28_03355 Dihydroorotase — —
Pseudomonas stutzeri RCH2 0.63 Psest_3813 ribonuclease PH 0.66 Psest_3123 dihydroorotase, homodimeric type low > 67
Variovorax sp. SCN45 0.63 GFF2381 Ribonuclease PH (EC 2.7.7.56) 0.59 GFF4557 Dihydroorotase (EC 3.5.2.3) low > 127
Pseudomonas fluorescens SBW25 0.63 PFLU_RS29490 ribonuclease PH 0.66 PFLU_RS05715 dihydroorotase — —
Pseudomonas simiae WCS417 0.63 PS417_27810 ribonuclease PH 0.66 PS417_05630 dihydroorotase — —
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS29490 ribonuclease PH 0.66 PFLU_RS05715 dihydroorotase — —
Pseudomonas sp. DMC3 0.63 GFF415 Ribonuclease PH 0.67 GFF5094 Dihydroorotase — —
Variovorax sp. OAS795 0.63 ABID97_RS23640 ribonuclease PH 0.59 ABID97_RS06040 dihydroorotase — —
Methylophilus sp. DMC18 0.62 GFF2136 Ribonuclease PH 0.61 GFF2451 Dihydroorotase — —
Paraburkholderia sabiae LMG 24235 0.62 QEN71_RS03645 ribonuclease PH 0.61 QEN71_RS26855 dihydroorotase low > 153
Azospirillum brasilense Sp245 0.61 AZOBR_RS02205 ribonuclease PH 0.52 AZOBR_RS04460 dihydroorotase low > 97
Acidovorax sp. GW101-3H11 0.60 Ac3H11_3670 Ribonuclease PH (EC 2.7.7.56) 0.62 Ac3H11_1963 Dihydroorotase (EC 3.5.2.3) — —
Paraburkholderia graminis OAS925 0.60 ABIE53_003234 ribonuclease PH 0.62 ABIE53_003505 dihydroorotase — —
Burkholderia phytofirmans PsJN 0.60 BPHYT_RS15325 ribonuclease PH 0.61 BPHYT_RS16675 dihydroorotase low > 109
Sinorhizobium meliloti 1021 0.60 SMc01144 ribonuclease PH 0.53 SMc02166 dihydroorotase low > 103
Paraburkholderia bryophila 376MFSha3.1 0.60 H281DRAFT_04008 RNAse PH 0.61 H281DRAFT_04265 dihydroorotase — —
Rhodanobacter denitrificans MT42 0.59 LRK55_RS11470 ribonuclease PH 0.57 LRK55_RS10600 dihydroorotase low > 63
Rhodanobacter sp. FW510-T8 0.59 OKGIIK_12150 rph ribonuclease PH 0.57 OKGIIK_12970 pyrC dihydroorotase — —
Rhodanobacter denitrificans FW104-10B01 0.59 LRK54_RS11745 ribonuclease PH 0.59 LRK54_RS10900 dihydroorotase — —
Rhodanobacter sp000427505 FW510-R12 0.59 LRK53_RS16795 ribonuclease PH 0.59 LRK53_RS03690 dihydroorotase — —
Azospirillum sp. SherDot2 0.59 MPMX19_02576 Ribonuclease PH 0.53 MPMX19_01633 Dihydroorotase — —
Agrobacterium fabrum C58 0.59 Atu0327 ribonuclease PH 0.53 Atu0399 dihydroorotase — —
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS04890 ribonuclease PH 0.62 RR42_RS02610 dihydroorotase — —
Herbaspirillum seropedicae SmR1 0.59 HSERO_RS10655 ribonuclease PH 0.62 HSERO_RS19235 dihydroorotase — —
Rhizobium sp. OAE497 0.59 ABIE40_RS01640 ribonuclease PH 0.52 ABIE40_RS02105 dihydroorotase — —
Ralstonia solanacearum PSI07 0.58 RPSI07_RS13840 ribonuclease PH 0.64 RPSI07_RS21625 dihydroorotase — —
Ralstonia sp. UNC404CL21Col 0.58 ABZR87_RS15255 ribonuclease PH 0.65 ABZR87_RS07550 dihydroorotase — —
Ralstonia solanacearum GMI1000 0.58 RS_RS10830 ribonuclease PH 0.65 RS_RS02420 dihydroorotase — —
Ralstonia solanacearum UW163 0.57 UW163_RS10375 ribonuclease PH 0.64 UW163_RS01995 dihydroorotase — —
Ralstonia solanacearum IBSBF1503 0.57 RALBFv3_RS03345 ribonuclease PH 0.64 RALBFv3_RS11590 dihydroorotase — —
Castellaniella sp019104865 MT123 0.57 ABCV34_RS03515 ribonuclease PH 0.57 ABCV34_RS09730 dihydroorotase — —
Dinoroseobacter shibae DFL-12 0.54 Dshi_3463 ribonuclease PH (RefSeq) 0.51 Dshi_2371 dihydroorotase, homodimeric type (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.52 PGA1_c35030 ribonuclease PH 0.52 PGA1_c10910 dihydroorotase PyrC low > 62

Not shown: 15 genomes with orthologs for CSW01_01115 only; 1 genomes with orthologs for CSW01_18760 only