Conservation of cofitness between CSW01_04375 and CSW01_11535 in Vibrio cholerae E7946 ATCC 55056

106 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04375 SsrA-binding protein 1.0 CSW01_11535 thiamine-phosphate kinase 0.51 18
Escherichia coli ECOR27 0.72 NOLOHH_12795 smpB SsrA-binding protein SmpB 0.49 NOLOHH_01385 thiL thiamine-phosphate kinase — —
Escherichia coli ECRC99 0.72 KEDOAH_07095 smpB SsrA-binding protein SmpB 0.49 KEDOAH_19525 thiL thiamine-phosphate kinase — —
Escherichia coli ECRC98 0.72 JDDGAC_24790 smpB SsrA-binding protein SmpB 0.49 JDDGAC_12095 thiL thiamine-phosphate kinase — —
Escherichia coli ECRC102 0.72 NIAGMN_18895 smpB SsrA-binding protein SmpB 0.49 NIAGMN_06495 thiL thiamine-phosphate kinase — —
Escherichia coli Nissle 1917 0.72 ECOLIN_RS14795 SsrA-binding protein SmpB 0.49 ECOLIN_RS02520 thiamine-phosphate kinase — —
Escherichia coli ECOR38 0.72 HEPCGN_20245 smpB SsrA-binding protein SmpB 0.49 HEPCGN_07065 thiL thiamine-phosphate kinase — —
Escherichia coli ECRC62 0.72 BNILDI_11600 smpB SsrA-binding protein SmpB 0.49 BNILDI_22800 thiL thiamine-phosphate kinase — —
Escherichia coli ECRC100 0.72 OKFHMN_21125 smpB SsrA-binding protein SmpB 0.49 OKFHMN_08440 thiL thiamine-phosphate kinase — —
Escherichia coli BW25113 0.72 b2620 smpB SsrA-binding protein (NCBI) 0.49 b0417 thiL thiamine monophosphate kinase (NCBI) — —
Escherichia coli ECRC101 0.72 MCAODC_11650 smpB SsrA-binding protein SmpB 0.49 MCAODC_27665 thiL thiamine-phosphate kinase — —
Escherichia coli BL21 0.72 ECD_02508 tmRNA-binding trans-translation protein 0.49 ECD_00365 thiamine monophosphate kinase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_01087 SsrA-binding protein 0.49 OHPLBJKB_03259 Thiamine-monophosphate kinase — —
Escherichia fergusonii Becca 0.72 EFB2_01273 SsrA-binding protein 0.49 EFB2_03640 Thiamine-monophosphate kinase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF4158 tmRNA-binding protein SmpB 0.48 GFF4321 Thiamine-monophosphate kinase (EC 2.7.4.16) — —
Enterobacter asburiae PDN3 0.70 EX28DRAFT_2723 SsrA-binding protein 0.50 EX28DRAFT_2553 thiamine-phosphate kinase — —
Enterobacter sp. TBS_079 0.70 MPMX20_03490 SsrA-binding protein 0.50 MPMX20_01009 Thiamine-monophosphate kinase — —
Dickeya dadantii 3937 0.70 DDA3937_RS04305 SsrA-binding protein SmpB 0.50 DDA3937_RS05520 thiamine-phosphate kinase — —
Klebsiella pneumoniae MKP103 0.70 KDGMDA_02270 SsrA-binding protein SmpB 0.50 KDGMDA_14455 thiamine-phosphate kinase — —
Dickeya dianthicola ME23 0.70 DZA65_RS04215 SsrA-binding protein SmpB 0.48 DZA65_RS05905 thiamine-phosphate kinase — —
Dickeya dianthicola 67-19 0.70 HGI48_RS04300 SsrA-binding protein SmpB 0.48 HGI48_RS05580 thiamine-phosphate kinase — —
Klebsiella michiganensis M5al 0.69 BWI76_RS21580 SsrA-binding protein 0.49 BWI76_RS06365 thiamine-monophosphate kinase — —
Pantoea agglomerans CFBP13505 P0401 0.69 PagCFBP13505_RS14680 SsrA-binding protein SmpB 0.50 PagCFBP13505_RS10440 thiamine-phosphate kinase — —
Pantoea sp. MT58 0.68 IAI47_04790 SsrA-binding protein SmpB 0.50 IAI47_14755 thiamine-phosphate kinase — —
Erwinia tracheiphila SCR3 0.68 LU632_RS17025 smpB SsrA-binding protein SmpB 0.48 LU632_RS18610 thiL thiamine-phosphate kinase — —
Erwinia tracheiphila HP pepo 2.2 0.68 IJEDHG_26965 smpB SsrA-binding protein SmpB 0.48 IJEDHG_26015 thiL thiamine-phosphate kinase — —
Rahnella sp. WP5 0.68 EX31_RS21740 SsrA-binding protein SmpB 0.49 EX31_RS22140 thiamine-phosphate kinase — —
Pectobacterium carotovorum WPP14 0.67 HER17_RS17440 SsrA-binding protein SmpB 0.49 HER17_RS15945 thiamine-phosphate kinase — —
Erwinia amylovora T8 0.67 OLJFJH_10155 SsrA-binding protein SmpB 0.49 OLJFJH_18075 thiamine-phosphate kinase — —
Serratia liquefaciens MT49 0.63 IAI46_19655 SsrA-binding protein SmpB 0.49 IAI46_04910 thiamine-phosphate kinase — —
Kangiella aquimarina DSM 16071 0.60 B158DRAFT_0969 SsrA-binding protein 0.33 B158DRAFT_1916 thiamine-monophosphate kinase — —
Alteromonas macleodii MIT1002 0.59 MIT1002_01806 Small protein B 0.49 MIT1002_02695 Thiamine-monophosphate kinase — —
Shewanella oneidensis MR-1 0.57 SO1473 smpB SsrA-binding protein (NCBI ptt file) 0.47 SO3464 thiL thiamin-monophosphate kinase (NCBI ptt file) — —
Shewanella sp. ANA-3 0.57 Shewana3_2952 smpB SsrA-binding protein (RefSeq) 0.48 Shewana3_1101 thiamine-monophosphate kinase (RefSeq) — —
Shewanella amazonensis SB2B 0.55 Sama_2388 smpB SsrA-binding protein (RefSeq) 0.46 Sama_1021 thiamine-phosphate kinase (RefSeq) — —
Shewanella loihica PV-4 0.55 Shew_1268 smpB SsrA-binding protein (RefSeq) 0.47 Shew_1192 thiamine-monophosphate kinase (RefSeq) — —
Marinobacter adhaerens HP15 0.55 HP15_3090 SsrA-binding protein 0.28 HP15_496 thiamine-monophosphate kinase — —
Xanthomonas campestris pv. campestris strain 8004 0.54 Xcc-8004.3437.1 tmRNA-binding protein SmpB 0.28 Xcc-8004.4386.1 Thiamine-monophosphate kinase (EC 2.7.4.16) — —
Acinetobacter radioresistens SK82 0.54 MPMX26_00737 SsrA-binding protein 0.32 MPMX26_02973 Thiamine-monophosphate kinase — —
Acinetobacter baumannii LAC-4 0.54 RR41_RS15055 SsrA-binding protein SmpB 0.34 RR41_RS00435 thiamine-phosphate kinase — —
Lysobacter sp. OAE881 0.53 ABIE51_RS11680 SsrA-binding protein SmpB 0.34 ABIE51_RS04660 thiamine-phosphate kinase — —
Pseudomonas sp. S08-1 0.53 OH686_17025 SsrA-binding protein 0.31 OH686_15720 thiamine-phosphate kinase — —
Pseudomonas sp. SVBP6 0.52 COO64_RS15300 smpB SsrA-binding protein SmpB 0.33 COO64_RS15865 thiL thiamine-phosphate kinase — —
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS05700 SsrA-binding protein SmpB 0.37 ABZR86_RS10645 thiamine-phosphate kinase — —
Pseudomonas stutzeri RCH2 0.52 Psest_0957 SsrA-binding protein 0.32 Psest_3547 thiamine-monophosphate kinase — —
Pseudomonas sp. BP01 0.52 JOY50_RS26715 smpB SsrA-binding protein SmpB 0.31 JOY50_RS20100 thiL thiamine-phosphate kinase — —
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_05690 SsrA-binding protein 0.31 AO353_06690 thiamine monophosphate kinase — —
Pseudomonas aeruginosa PA14 0.51 IKLFDK_29750 SsrA-binding protein SmpB 0.31 IKLFDK_20885 thiamine-phosphate kinase — —
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_07540 SsrA-binding protein 0.31 AO356_14955 thiamine monophosphate kinase — —
Pseudomonas segetis P6 0.51 MPMX49_01175 SsrA-binding protein 0.34 MPMX49_00995 Thiamine-monophosphate kinase — —
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_3378 tmRNA-binding protein SmpB 0.31 Pf6N2E2_4924 Thiamine-monophosphate kinase (EC 2.7.4.16) — —
Pseudomonas putida KT2440 0.51 PP_4733 SsrA-binding protein 0.31 PP_0519 thiamin monophosphate kinase — —
Dechlorosoma suillum PS 0.51 Dsui_2675 SsrA-binding protein 0.29 Dsui_0712 thiamine-monophosphate kinase — —
Pseudomonas sp. RS175 0.50 PFR28_00065 SsrA-binding protein 0.33 PFR28_03944 Thiamine-monophosphate kinase — —
Rhodanobacter sp000427505 FW510-R12 0.50 LRK53_RS11435 SsrA-binding protein SmpB 0.36 LRK53_RS05440 thiamine-phosphate kinase — —
Rhodanobacter sp. FW510-T8 0.50 OKGIIK_07375 smpB SsrA-binding protein SmpB 0.36 OKGIIK_11395 thiL thiamine-phosphate kinase — —
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS17925 SsrA-binding protein SmpB 0.36 LRK54_RS04570 thiamine-phosphate kinase — —
Rhodanobacter denitrificans MT42 0.50 LRK55_RS17780 SsrA-binding protein SmpB 0.36 LRK55_RS04345 thiamine-phosphate kinase — —
Ralstonia solanacearum PSI07 0.49 RPSI07_RS17000 SsrA-binding protein SmpB 0.33 RPSI07_RS11340 thiamine-phosphate kinase — —
Ralstonia solanacearum GMI1000 0.49 RS_RS07145 SsrA-binding protein 0.34 RS_RS13850 thiamine-phosphate kinase — —
Pseudomonas syringae pv. syringae B728a 0.49 Psyr_4203 SsrA-binding protein 0.33 Psyr_4457 thiamine-phosphate kinase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.49 Psyr_4203 SsrA-binding protein 0.33 Psyr_4457 thiamine-phosphate kinase — —
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS00490 SsrA-binding protein SmpB 0.34 RALBFv3_RS05905 thiamine-phosphate kinase — —
Ralstonia solanacearum UW163 0.49 UW163_RS13820 SsrA-binding protein SmpB 0.34 UW163_RS07720 thiamine-phosphate kinase — —
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_1184 tmRNA-binding protein SmpB 0.33 Pf1N1B4_2654 Thiamine-monophosphate kinase (EC 2.7.4.16) — —
Pseudomonas sp. DMC3 0.48 GFF4965 SsrA-binding protein 0.32 GFF3832 Thiamine-monophosphate kinase — —
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS11940 SsrA-binding protein SmpB 0.31 ABZR87_RS01570 thiamine-phosphate kinase — —
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS11775 single-stranded DNA-binding protein 0.31 RR42_RS17615 thiamine monophosphate kinase — —
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_5112 tmRNA-binding protein SmpB 0.33 PfGW456L13_1318 Thiamine-monophosphate kinase (EC 2.7.4.16) — —
Methylophilus sp. DMC18 0.48 GFF1142 SsrA-binding protein 0.32 GFF837 Thiamine-monophosphate kinase — —
Castellaniella sp019104865 MT123 0.47 ABCV34_RS04010 SsrA-binding protein SmpB 0.29 ABCV34_RS10120 thiamine-phosphate kinase — —
Pseudomonas fluorescens SBW25 0.47 PFLU_RS25935 SsrA-binding protein SmpB 0.32 PFLU_RS26875 thiamine-phosphate kinase — —
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS25935 SsrA-binding protein SmpB 0.32 PFLU_RS26875 thiamine-phosphate kinase — —
Pseudomonas simiae WCS417 0.47 PS417_24095 SsrA-binding protein 0.31 PS417_25240 thiamine monophosphate kinase — —
Pseudomonas lactucae CFBP13502 0.47 GEMAOFIL_04969 SsrA-binding protein 0.32 GEMAOFIL_05153 Thiamine-monophosphate kinase — —
Variovorax sp. OAS795 0.47 ABID97_RS16435 SsrA-binding protein SmpB 0.33 ABID97_RS04870 thiamine-phosphate kinase — —
Variovorax sp. SCN45 0.46 GFF213 tmRNA-binding protein SmpB 0.33 GFF6265 Thiamine-monophosphate kinase (EC 2.7.4.16) — —
Paraburkholderia graminis OAS925 0.46 ABIE53_002482 SsrA-binding protein 0.34 ABIE53_003544 thiamine-monophosphate kinase — —
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS12040 single-stranded DNA-binding protein 0.31 BPHYT_RS16885 thiamine monophosphate kinase — —
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_00630 SsrA-binding protein 0.32 H281DRAFT_06307 thiamine-phosphate kinase — —
Acidovorax sp. GW101-3H11 0.44 Ac3H11_2861 tmRNA-binding protein SmpB 0.35 Ac3H11_749 Thiamine-monophosphate kinase (EC 2.7.4.16) — —
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS11000 single-stranded DNA-binding protein 0.35 HSERO_RS16830 thiamine monophosphate kinase — —
Caulobacter crescentus NA1000 0.42 CCNA_01254 SsrA-binding protein 0.19 CCNA_01423 thiamine-monophosphate kinase — —
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS06520 SsrA-binding protein SmpB 0.33 QEN71_RS27045 thiamine-phosphate kinase — —
Caulobacter crescentus NA1000 Δfur 0.42 CCNA_01254 SsrA-binding protein 0.19 CCNA_01423 thiamine-monophosphate kinase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF4352 tmRNA-binding protein SmpB 0.30 GFF3093 Thiamine-monophosphate kinase (EC 2.7.4.16) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.41 A4249_RS05480 SsrA-binding protein SmpB 0.20 A4249_RS06005 thiamine-phosphate kinase — —
Rhodospirillum rubrum S1H 0.41 Rru_A1864 SmpB protein (NCBI) 0.23 Rru_A1820 Thiamine-monophosphate kinase (NCBI) — —
Desulfovibrio vulgaris Hildenborough JW710 0.40 DVU0828 smpB SsrA-binding protein (TIGR) 0.18 DVU0157 thiL thiamin-monophosphate kinase (TIGR) — —
Synechococcus elongatus PCC 7942 0.39 Synpcc7942_1795 smpB SsrA-binding protein 0.17 Synpcc7942_2567 thiL thiamine monophosphate kinase — —
Azospirillum brasilense Sp245 0.38 AZOBR_RS08425 single-stranded DNA-binding protein 0.26 AZOBR_RS10050 thiamine-monophosphate kinase — —
Azospirillum sp. SherDot2 0.38 MPMX19_01218 SsrA-binding protein 0.27 MPMX19_00731 Thiamine-monophosphate kinase — —
Rhodopseudomonas palustris CGA009 0.37 TX73_013930 SsrA-binding protein SmpB 0.21 TX73_014145 thiamine-phosphate kinase — —
Mycobacterium tuberculosis H37Rv 0.36 Rv3100c Probable SSRA-binding protein SmpB 0.14 Rv2977c Probable thiamine-monophosphate kinase ThiL (thiamine-phosphate kinase) — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.35 Echvi_2086 SsrA-binding protein 0.20 Echvi_0088 thiamine-monophosphate kinase — —
Bosea sp. OAE506 0.35 ABIE41_RS19950 SsrA-binding protein SmpB 0.22 ABIE41_RS19740 thiamine-phosphate kinase — —
Xanthobacter sp. DMC5 0.34 GFF405 SsrA-binding protein 0.22 GFF581 Thiamine-monophosphate kinase — —
Cellulophaga baltica 18 0.31 M666_RS17575 SsrA-binding protein SmpB 0.17 M666_RS05690 thiamine-phosphate kinase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.29 CA264_04675 SsrA-binding protein 0.18 CA264_02015 thiamine-phosphate kinase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.28 ABZR88_RS00810 SsrA-binding protein SmpB 0.17 ABZR88_RS20925 thiamine-phosphate kinase — —
Phocaeicola dorei CL03T12C01 0.27 ABI39_RS12595 SsrA-binding protein 0.16 ABI39_RS07910 thiamine-phosphate kinase — —
Phocaeicola vulgatus CL09T03C04 0.26 HMPREF1058_RS16680 SsrA-binding protein 0.17 HMPREF1058_RS12880 thiamine-phosphate kinase — —
Bacteroides stercoris CC31F 0.26 HMPREF1181_RS04945 SsrA-binding protein 0.16 HMPREF1181_RS07645 thiamine-phosphate kinase — —
Bacteroides ovatus ATCC 8483 0.26 BACOVA_01261 SsrA-binding protein 0.17 BACOVA_02937 thiamine-phosphate kinase — —
Parabacteroides merdae CL09T00C40 0.25 HMPREF1078_RS14950 SsrA-binding protein 0.16 HMPREF1078_RS13035 thiamine-phosphate kinase — —
Pedobacter sp. GW460-11-11-14-LB5 0.25 CA265_RS10920 SsrA-binding protein 0.15 CA265_RS21170 thiamine-phosphate kinase — —
Bacteroides thetaiotaomicron VPI-5482 0.25 BT0179 SsrA-binding protein (NCBI ptt file) 0.17 BT1882 putative thiamine-monophosphate kinase (NCBI ptt file) — —

Not shown: 12 genomes with orthologs for CSW01_04375 only; 2 genomes with orthologs for CSW01_11535 only