Conservation of cofitness between CSW01_10585 and CSW01_10650 in Vibrio cholerae E7946 ATCC 55056

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10585 flagellar type III secretion system protein FliR 1.0 CSW01_10650 flagellar basal body M-ring protein FliF 0.96 2
Shewanella oneidensis MR-1 0.52 SO3216 fliR flagellar biosynthetic protein FliR (NCBI ptt file) 0.39 SO3228 fliF flagellar M-ring protein FliF (NCBI ptt file) 0.78 17
Shewanella sp. ANA-3 0.51 Shewana3_1354 fliR flagellar biosynthesis protein FliR (RefSeq) 0.39 Shewana3_1342 fliF flagellar MS-ring protein (RefSeq) 0.74 14
Shewanella loihica PV-4 0.49 Shew_1378 fliR flagellar biosynthesis protein FliR (RefSeq) 0.37 Shew_1366 fliF flagellar MS-ring protein (RefSeq) — —
Shewanella amazonensis SB2B 0.48 Sama_2285 fliR flagellar biosynthesis protein FliR (RefSeq) 0.39 Sama_2297 fliF flagellar MS-ring protein (RefSeq) 0.99 2
Alteromonas macleodii MIT1002 0.44 MIT1002_01097 Flagellar biosynthetic protein FliR 0.43 MIT1002_01085 Flagellar M-ring protein low > 70
Marinobacter adhaerens HP15 0.39 HP15_2310 flagellar biosynthesis protein FliR 0.24 HP15_2326 flagellar MS-ring protein 0.90 17
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_3442 Flagellar biosynthesis protein FliR 0.23 Psyr_3457 Flagellar FliF M-ring protein 0.47 56
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_3442 Flagellar biosynthesis protein FliR 0.23 Psyr_3457 Flagellar FliF M-ring protein 0.81 4
Pseudomonas segetis P6 0.38 MPMX49_03132 Flagellar biosynthetic protein FliR 0.23 MPMX49_03145 Flagellar M-ring protein 0.97 3
Pseudomonas sp. SVBP6 0.38 COO64_RS21205 fliR flagellar biosynthetic protein FliR 0.24 COO64_RS21280 fliF flagellar basal-body MS-ring/collar protein FliF 0.93 4
Pseudomonas sp. RS175 0.36 PFR28_00847 Flagellar biosynthetic protein FliR 0.23 PFR28_00832 Flagellar M-ring protein 0.94 7
Pseudomonas stutzeri RCH2 0.36 Psest_1734 flagellar biosynthetic protein FliR 0.22 Psest_1719 flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) 0.90 6
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_2578 Flagellar biosynthesis protein FliR 0.23 Pf6N2E2_2593 Flagellar M-ring protein FliF 0.55 37
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_4337 Flagellar biosynthesis protein FliR 0.24 PfGW456L13_4353 Flagellar M-ring protein FliF low > 87
Pseudomonas sp. BP01 0.36 JOY50_RS00610 fliR flagellar biosynthetic protein FliR 0.24 JOY50_RS00685 fliF flagellar basal-body MS-ring/collar protein FliF 0.80 9
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_03760 flagellar biosynthetic protein FliR 0.23 AO356_03835 flagellar M-ring protein FliF 0.95 2
Pseudomonas sp. S08-1 0.35 OH686_02760 flagellar biosynthetic protein FliR 0.21 OH686_02835 flagellar M-ring protein FliF 0.96 11
Pseudomonas aeruginosa MRSN321 0.35 DY961_RS05670 fliR;go_component=membrane|0016020||IEA;go_process=protein flagellar biosynthetic protein FliR 0.23 DY961_RS06945 fliF;go_component=bacterial-type flagellar basal-body MS-ring/collar protein FliF 0.49 18
Pseudomonas aeruginosa PA14 0.35 IKLFDK_06885 flagellar biosynthetic protein FliR 0.23 IKLFDK_05065 flagellar M-ring protein FliF 0.68 3
Pseudomonas aeruginosa PUPa3 0.35 DQ20_RS47120 fliR;go_component=membrane|0016020||IEA;go_process=protein flagellar biosynthetic protein FliR 0.23 DQ20_RS45890 fliF;go_component=bacterial-type flagellar basal-body MS-ring/collar protein FliF 0.83 9
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_18755 flagellar biosynthetic protein FliR 0.23 AO353_18680 flagellar M-ring protein FliF 0.80 12
Pseudomonas sp. DMC3 0.35 GFF2465 Flagellar biosynthetic protein FliR 0.23 GFF2449 Flagellar M-ring protein 0.86 6
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_3620 Flagellar biosynthesis protein FliR 0.23 Pf1N1B4_3604 Flagellar M-ring protein FliF low > 87
Pseudomonas lactucae CFBP13502 0.35 GEMAOFIL_04144 Flagellar biosynthetic protein FliR 0.22 GEMAOFIL_04159 Flagellar M-ring protein 0.60 55
Pseudomonas simiae WCS417 0.35 PS417_19730 flagellar biosynthesis protein FliR 0.22 PS417_19805 flagellar M-ring protein FliF 0.83 36
Pseudomonas fluorescens SBW25 0.35 PFLU_RS21700 flagellar type III secretion system protein FliR 0.22 PFLU_RS21775 flagellar basal body M-ring protein FliF 0.81 27
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS21700 flagellar type III secretion system protein FliR 0.22 PFLU_RS21775 flagellar basal body M-ring protein FliF 0.90 22
Pseudomonas orientalis W4I3 0.34 QF045_RS21860 flagellar biosynthetic protein FliR 0.22 QF045_RS21935 flagellar basal-body MS-ring/collar protein FliF low > 93
Pseudomonas putida KT2440 0.34 PP_4353 Flagellar biosynthetic protein fliR 0.23 PP_4369 Flagellar M-ring protein 0.84 23
Burkholderia phytofirmans PsJN 0.27 BPHYT_RS18835 flagellar biosynthesis protein FliR 0.20 BPHYT_RS18775 flagellar M-ring protein FliF 0.56 6
Dyella japonica UNC79MFTsu3.2 0.26 ABZR86_RS20240 flagellar biosynthetic protein FliR 0.19 ABZR86_RS20170 flagellar basal-body MS-ring/collar protein FliF low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.26 GFF4006 Flagellar biosynthesis protein FliR 0.16 GFF4018 Flagellar M-ring protein FliF 0.84 18
Dechlorosoma suillum PS 0.26 Dsui_1744 flagellar biosynthetic protein FliR 0.18 Dsui_1756 flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF 0.91 1
Paraburkholderia graminis OAS925 0.26 ABIE53_000086 flagellar biosynthetic protein FliR 0.20 ABIE53_000074 flagellar M-ring protein FliF 0.99 2
Pectobacterium carotovorum WPP14 0.25 HER17_RS08220 flagellar type III secretion system protein FliR 0.15 HER17_RS08280 flagellar M-ring protein FliF 0.95 3
Paraburkholderia bryophila 376MFSha3.1 0.25 H281DRAFT_05774 flagellar biosynthetic protein FliR 0.19 H281DRAFT_05786 flagellar M-ring protein FliF 0.75 4
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS28855 flagellar biosynthetic protein FliR 0.18 QEN71_RS28795 flagellar basal-body MS-ring/collar protein FliF 0.96 25
Methylophilus sp. DMC18 0.24 GFF552 Flagellar biosynthetic protein FliR 0.19 GFF540 Flagellar M-ring protein low > 43
Pantoea sp. MT58 0.24 IAI47_07970 flagellar type III secretion system protein FliR 0.17 IAI47_08030 flagellar M-ring protein FliF 0.87 12
Ralstonia sp. UNC404CL21Col 0.24 ABZR87_RS22220 flagellar biosynthetic protein FliR 0.18 ABZR87_RS22080 flagellar basal-body MS-ring/collar protein FliF 0.97 4
Ralstonia solanacearum IBSBF1503 0.23 RALBFv3_RS21675 flagellar biosynthetic protein FliR 0.18 RALBFv3_RS21590 flagellar basal body M-ring protein FliF low > 76
Herbaspirillum seropedicae SmR1 0.23 HSERO_RS10250 flagellar biosynthesis protein FliR 0.19 HSERO_RS10310 flagellar M-ring protein FliF 0.96 5
Ralstonia solanacearum GMI1000 0.23 RS_RS18950 flagellar biosynthetic protein FliR 0.17 RS_RS19035 flagellar basal body M-ring protein FliF low > 80
Ralstonia solanacearum PSI07 0.23 RPSI07_RS01450 flagellar biosynthetic protein FliR 0.17 RPSI07_RS01535 flagellar basal body M-ring protein FliF low > 81
Ralstonia solanacearum UW163 0.23 UW163_RS17510 flagellar biosynthetic protein FliR 0.18 UW163_RS17600 flagellar basal body M-ring protein FliF — —
Erwinia amylovora T8 0.23 OLJFJH_15415 flagellar type III secretion system protein FliR 0.17 OLJFJH_15355 flagellar M-ring protein FliF 0.56 17
Dickeya dadantii 3937 0.23 DDA3937_RS13425 flagellar type III secretion system protein FliR 0.15 DDA3937_RS13365 flagellar M-ring protein FliF 0.99 3
Erwinia tracheiphila SCR3 0.23 LU632_RS10515 fliR flagellar type III secretion system protein FliR 0.16 LU632_RS10575 fliF flagellar M-ring protein FliF low > 73
Erwinia tracheiphila HP pepo 2.2 0.23 IJEDHG_21175 fliR flagellar type III secretion system protein FliR 0.16 IJEDHG_21235 fliF flagellar M-ring protein FliF low > 61
Dickeya dianthicola ME23 0.22 DZA65_RS13955 flagellar type III secretion system protein FliR 0.15 DZA65_RS13895 flagellar basal body M-ring protein FliF 1.00 1
Dickeya dianthicola 67-19 0.22 HGI48_RS13470 flagellar type III secretion system protein FliR 0.15 HGI48_RS13410 flagellar M-ring protein FliF 0.97 1
Hydrogenophaga sp. GW460-11-11-14-LB1 0.22 GFF4089 Flagellar biosynthesis protein FliR 0.17 GFF1450 Flagellar M-ring protein FliF low > 90
Rhodanobacter sp000427505 FW510-R12 0.21 LRK53_RS15020 flagellar biosynthetic protein FliR 0.14 LRK53_RS15080 flagellar M-ring protein FliF low > 59
Xanthomonas campestris pv. campestris strain 8004 0.21 Xcc-8004.2823.1 Flagellar biosynthesis protein FliR 0.18 Xcc-8004.2809.1 Flagellar M-ring protein FliF low > 74
Serratia liquefaciens MT49 0.20 IAI46_15900 flagellar type III secretion system protein FliR 0.17 IAI46_15840 flagellar M-ring protein FliF low > 87
Cupriavidus basilensis FW507-4G11 0.20 RR42_RS23350 flagellar biosynthesis protein FliR 0.15 RR42_RS23570 flagellar M-ring protein FliF low > 128
Lysobacter sp. OAE881 0.20 ABIE51_RS16840 flagellar biosynthetic protein FliR 0.21 ABIE51_RS16780 flagellar basal-body MS-ring/collar protein FliF 0.96 2
Rhodanobacter sp. FW510-T8 0.19 OKGIIK_02805 fliR flagellar biosynthetic protein FliR 0.15 OKGIIK_02745 fliF flagellar M-ring protein FliF 0.59 6
Rhodanobacter denitrificans MT42 0.18 LRK55_RS13295 flagellar biosynthetic protein FliR 0.15 LRK55_RS13235 flagellar basal-body MS-ring/collar protein FliF 0.79 20
Rhodanobacter denitrificans FW104-10B01 0.18 LRK54_RS13555 flagellar biosynthetic protein FliR 0.15 LRK54_RS13495 flagellar M-ring protein FliF 0.51 11
Magnetospirillum magneticum AMB-1 0.14 AMB_RS03185 flagellar type III secretion system protein FliR 0.12 AMB_RS02590 flagellar M-ring protein FliF low > 64
Desulfovibrio vulgaris Miyazaki F 0.14 DvMF_2016 flagellar biosynthetic protein FliR (RefSeq) 0.12 DvMF_2287 flagellar M-ring protein FliF (RefSeq) 0.94 6
Brevundimonas sp. GW460-12-10-14-LB2 0.14 A4249_RS15230 flagellar biosynthetic protein FliR 0.11 A4249_RS09785 flagellar basal-body MS-ring/collar protein FliF low > 48
Rhodospirillum rubrum S1H 0.14 Rru_A2822 Flagellar biosynthesis protein FliR (NCBI) 0.16 Rru_A0545 Flagellar FliF M-ring protein (NCBI) low > 58
Desulfovibrio vulgaris Hildenborough JW710 0.12 DVU3234 flagellar biosynthetic protein FliR (TIGR) 0.14 DVU0313 fliF flagellar M-ring protein FliF (TIGR) 0.94 8
Azospirillum brasilense Sp245 0.12 AZOBR_RS11115 flagellar biosynthesis protein FliR 0.15 AZOBR_RS20185 flagellar M-ring protein FliF 0.89 4
Rhodopseudomonas palustris CGA009 0.12 TX73_020140 flagellar biosynthetic protein FliR 0.13 TX73_006490 flagellar basal-body MS-ring/collar protein FliF 0.96 5
Caulobacter crescentus NA1000 Δfur 0.11 CCNA_01130 flagellar biosynthesis protein FliR 0.12 CCNA_00950 flagellar M-ring protein FliF low > 67
Caulobacter crescentus NA1000 0.11 CCNA_01130 flagellar biosynthesis protein FliR 0.12 CCNA_00950 flagellar M-ring protein FliF 0.88 13
Azospirillum sp. SherDot2 0.11 MPMX19_00866 Flagellar biosynthetic protein FliR 0.15 MPMX19_04094 Flagellar M-ring protein 0.95 4
Sinorhizobium meliloti 1021 0.10 SMc03055 flagellar biosynthesis protein FliR 0.11 SMc03014 flagellar MS-ring protein 0.30 11

Not shown: 21 genomes with orthologs for CSW01_10585 only; 3 genomes with orthologs for CSW01_10650 only