Conservation of cofitness between CSW01_10650 and CSW01_10585 in Vibrio cholerae E7946 ATCC 55056

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10650 flagellar basal body M-ring protein FliF 1.0 CSW01_10585 flagellar type III secretion system protein FliR 0.96 5
Alteromonas macleodii MIT1002 0.43 MIT1002_01085 Flagellar M-ring protein 0.44 MIT1002_01097 Flagellar biosynthetic protein FliR low > 70
Shewanella amazonensis SB2B 0.39 Sama_2297 fliF flagellar MS-ring protein (RefSeq) 0.48 Sama_2285 fliR flagellar biosynthesis protein FliR (RefSeq) 0.99 2
Shewanella oneidensis MR-1 0.39 SO3228 fliF flagellar M-ring protein FliF (NCBI ptt file) 0.52 SO3216 fliR flagellar biosynthetic protein FliR (NCBI ptt file) 0.78 10
Shewanella sp. ANA-3 0.39 Shewana3_1342 fliF flagellar MS-ring protein (RefSeq) 0.51 Shewana3_1354 fliR flagellar biosynthesis protein FliR (RefSeq) 0.74 40
Shewanella loihica PV-4 0.37 Shew_1366 fliF flagellar MS-ring protein (RefSeq) 0.49 Shew_1378 fliR flagellar biosynthesis protein FliR (RefSeq) — —
Marinobacter adhaerens HP15 0.24 HP15_2326 flagellar MS-ring protein 0.39 HP15_2310 flagellar biosynthesis protein FliR 0.90 22
Pseudomonas fluorescens GW456-L13 0.24 PfGW456L13_4353 Flagellar M-ring protein FliF 0.36 PfGW456L13_4337 Flagellar biosynthesis protein FliR low > 87
Pseudomonas sp. BP01 0.24 JOY50_RS00685 fliF flagellar basal-body MS-ring/collar protein FliF 0.36 JOY50_RS00610 fliR flagellar biosynthetic protein FliR 0.80 16
Pseudomonas sp. SVBP6 0.24 COO64_RS21280 fliF flagellar basal-body MS-ring/collar protein FliF 0.38 COO64_RS21205 fliR flagellar biosynthetic protein FliR 0.93 17
Pseudomonas sp. RS175 0.23 PFR28_00832 Flagellar M-ring protein 0.36 PFR28_00847 Flagellar biosynthetic protein FliR 0.94 10
Pseudomonas segetis P6 0.23 MPMX49_03145 Flagellar M-ring protein 0.38 MPMX49_03132 Flagellar biosynthetic protein FliR 0.97 3
Pseudomonas putida KT2440 0.23 PP_4369 Flagellar M-ring protein 0.34 PP_4353 Flagellar biosynthetic protein fliR 0.84 14
Pseudomonas fluorescens FW300-N2C3 0.23 AO356_03835 flagellar M-ring protein FliF 0.35 AO356_03760 flagellar biosynthetic protein FliR 0.95 11
Pseudomonas aeruginosa PA14 0.23 IKLFDK_05065 flagellar M-ring protein FliF 0.35 IKLFDK_06885 flagellar biosynthetic protein FliR 0.68 34
Pseudomonas fluorescens FW300-N2E3 0.23 AO353_18680 flagellar M-ring protein FliF 0.35 AO353_18755 flagellar biosynthetic protein FliR 0.80 15
Pseudomonas aeruginosa PUPa3 0.23 DQ20_RS45890 fliF;go_component=bacterial-type flagellar basal-body MS-ring/collar protein FliF 0.35 DQ20_RS47120 fliR;go_component=membrane|0016020||IEA;go_process=protein flagellar biosynthetic protein FliR 0.83 7
Pseudomonas fluorescens FW300-N1B4 0.23 Pf1N1B4_3604 Flagellar M-ring protein FliF 0.35 Pf1N1B4_3620 Flagellar biosynthesis protein FliR low > 87
Pseudomonas aeruginosa MRSN321 0.23 DY961_RS06945 fliF;go_component=bacterial-type flagellar basal-body MS-ring/collar protein FliF 0.35 DY961_RS05670 fliR;go_component=membrane|0016020||IEA;go_process=protein flagellar biosynthetic protein FliR 0.49 73
Pseudomonas sp. DMC3 0.23 GFF2449 Flagellar M-ring protein 0.35 GFF2465 Flagellar biosynthetic protein FliR 0.86 10
Pseudomonas syringae pv. syringae B728a 0.23 Psyr_3457 Flagellar FliF M-ring protein 0.38 Psyr_3442 Flagellar biosynthesis protein FliR 0.81 10
Pseudomonas syringae pv. syringae B728a ΔmexB 0.23 Psyr_3457 Flagellar FliF M-ring protein 0.38 Psyr_3442 Flagellar biosynthesis protein FliR 0.47 39
Pseudomonas fluorescens FW300-N2E2 0.23 Pf6N2E2_2593 Flagellar M-ring protein FliF 0.36 Pf6N2E2_2578 Flagellar biosynthesis protein FliR 0.55 59
Pseudomonas lactucae CFBP13502 0.22 GEMAOFIL_04159 Flagellar M-ring protein 0.35 GEMAOFIL_04144 Flagellar biosynthetic protein FliR low > 96
Pseudomonas orientalis W4I3 0.22 QF045_RS21935 flagellar basal-body MS-ring/collar protein FliF 0.34 QF045_RS21860 flagellar biosynthetic protein FliR low > 93
Pseudomonas simiae WCS417 0.22 PS417_19805 flagellar M-ring protein FliF 0.35 PS417_19730 flagellar biosynthesis protein FliR 0.83 5
Pseudomonas fluorescens SBW25-INTG 0.22 PFLU_RS21775 flagellar basal body M-ring protein FliF 0.35 PFLU_RS21700 flagellar type III secretion system protein FliR 0.90 9
Pseudomonas fluorescens SBW25 0.22 PFLU_RS21775 flagellar basal body M-ring protein FliF 0.35 PFLU_RS21700 flagellar type III secretion system protein FliR 0.81 10
Pseudomonas stutzeri RCH2 0.22 Psest_1719 flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) 0.36 Psest_1734 flagellar biosynthetic protein FliR 0.90 9
Lysobacter sp. OAE881 0.21 ABIE51_RS16780 flagellar basal-body MS-ring/collar protein FliF 0.20 ABIE51_RS16840 flagellar biosynthetic protein FliR 0.96 2
Pseudomonas sp. S08-1 0.21 OH686_02835 flagellar M-ring protein FliF 0.35 OH686_02760 flagellar biosynthetic protein FliR 0.96 7
Paraburkholderia graminis OAS925 0.20 ABIE53_000074 flagellar M-ring protein FliF 0.26 ABIE53_000086 flagellar biosynthetic protein FliR 0.99 5
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS18775 flagellar M-ring protein FliF 0.27 BPHYT_RS18835 flagellar biosynthesis protein FliR 0.56 44
Methylophilus sp. DMC18 0.19 GFF540 Flagellar M-ring protein 0.24 GFF552 Flagellar biosynthetic protein FliR low > 43
Dyella japonica UNC79MFTsu3.2 0.19 ABZR86_RS20170 flagellar basal-body MS-ring/collar protein FliF 0.26 ABZR86_RS20240 flagellar biosynthetic protein FliR low > 74
Paraburkholderia bryophila 376MFSha3.1 0.19 H281DRAFT_05786 flagellar M-ring protein FliF 0.25 H281DRAFT_05774 flagellar biosynthetic protein FliR 0.75 18
Herbaspirillum seropedicae SmR1 0.19 HSERO_RS10310 flagellar M-ring protein FliF 0.23 HSERO_RS10250 flagellar biosynthesis protein FliR 0.96 8
Xanthomonas campestris pv. campestris strain 8004 0.18 Xcc-8004.2809.1 Flagellar M-ring protein FliF 0.21 Xcc-8004.2823.1 Flagellar biosynthesis protein FliR low > 74
Ralstonia sp. UNC404CL21Col 0.18 ABZR87_RS22080 flagellar basal-body MS-ring/collar protein FliF 0.24 ABZR87_RS22220 flagellar biosynthetic protein FliR 0.97 11
Dechlorosoma suillum PS 0.18 Dsui_1756 flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF 0.26 Dsui_1744 flagellar biosynthetic protein FliR 0.91 4
Paraburkholderia sabiae LMG 24235 0.18 QEN71_RS28795 flagellar basal-body MS-ring/collar protein FliF 0.25 QEN71_RS28855 flagellar biosynthetic protein FliR 0.96 37
Ralstonia solanacearum UW163 0.18 UW163_RS17600 flagellar basal body M-ring protein FliF 0.23 UW163_RS17510 flagellar biosynthetic protein FliR — —
Ralstonia solanacearum IBSBF1503 0.18 RALBFv3_RS21590 flagellar basal body M-ring protein FliF 0.23 RALBFv3_RS21675 flagellar biosynthetic protein FliR 0.39 75
Hydrogenophaga sp. GW460-11-11-14-LB1 0.17 GFF1450 Flagellar M-ring protein FliF 0.22 GFF4089 Flagellar biosynthesis protein FliR low > 90
Ralstonia solanacearum GMI1000 0.17 RS_RS19035 flagellar basal body M-ring protein FliF 0.23 RS_RS18950 flagellar biosynthetic protein FliR low > 80
Serratia liquefaciens MT49 0.17 IAI46_15840 flagellar M-ring protein FliF 0.20 IAI46_15900 flagellar type III secretion system protein FliR low > 87
Erwinia amylovora T8 0.17 OLJFJH_15355 flagellar M-ring protein FliF 0.23 OLJFJH_15415 flagellar type III secretion system protein FliR low > 58
Ralstonia solanacearum PSI07 0.17 RPSI07_RS01535 flagellar basal body M-ring protein FliF 0.23 RPSI07_RS01450 flagellar biosynthetic protein FliR low > 81
Pantoea sp. MT58 0.17 IAI47_08030 flagellar M-ring protein FliF 0.24 IAI47_07970 flagellar type III secretion system protein FliR 0.87 24
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.16 GFF4018 Flagellar M-ring protein FliF 0.26 GFF4006 Flagellar biosynthesis protein FliR 0.84 5
Erwinia tracheiphila HP pepo 2.2 0.16 IJEDHG_21235 fliF flagellar M-ring protein FliF 0.23 IJEDHG_21175 fliR flagellar type III secretion system protein FliR low > 61
Erwinia tracheiphila SCR3 0.16 LU632_RS10575 fliF flagellar M-ring protein FliF 0.23 LU632_RS10515 fliR flagellar type III secretion system protein FliR low > 73
Rhodospirillum rubrum S1H 0.16 Rru_A0545 Flagellar FliF M-ring protein (NCBI) 0.14 Rru_A2822 Flagellar biosynthesis protein FliR (NCBI) low > 58
Rhodanobacter denitrificans MT42 0.15 LRK55_RS13235 flagellar basal-body MS-ring/collar protein FliF 0.18 LRK55_RS13295 flagellar biosynthetic protein FliR 0.79 23
Rhodanobacter denitrificans FW104-10B01 0.15 LRK54_RS13495 flagellar M-ring protein FliF 0.18 LRK54_RS13555 flagellar biosynthetic protein FliR 0.51 22
Azospirillum brasilense Sp245 0.15 AZOBR_RS20185 flagellar M-ring protein FliF 0.12 AZOBR_RS11115 flagellar biosynthesis protein FliR 0.89 12
Pectobacterium carotovorum WPP14 0.15 HER17_RS08280 flagellar M-ring protein FliF 0.25 HER17_RS08220 flagellar type III secretion system protein FliR 0.95 9
Dickeya dadantii 3937 0.15 DDA3937_RS13365 flagellar M-ring protein FliF 0.23 DDA3937_RS13425 flagellar type III secretion system protein FliR 0.99 11
Cupriavidus basilensis FW507-4G11 0.15 RR42_RS23570 flagellar M-ring protein FliF 0.20 RR42_RS23350 flagellar biosynthesis protein FliR low > 128
Dickeya dianthicola ME23 0.15 DZA65_RS13895 flagellar basal body M-ring protein FliF 0.22 DZA65_RS13955 flagellar type III secretion system protein FliR 1.00 1
Dickeya dianthicola 67-19 0.15 HGI48_RS13410 flagellar M-ring protein FliF 0.22 HGI48_RS13470 flagellar type III secretion system protein FliR 0.97 3
Rhodanobacter sp. FW510-T8 0.15 OKGIIK_02745 fliF flagellar M-ring protein FliF 0.19 OKGIIK_02805 fliR flagellar biosynthetic protein FliR 0.59 42
Azospirillum sp. SherDot2 0.15 MPMX19_04094 Flagellar M-ring protein 0.11 MPMX19_00866 Flagellar biosynthetic protein FliR 0.95 4
Desulfovibrio vulgaris Hildenborough JW710 0.14 DVU0313 fliF flagellar M-ring protein FliF (TIGR) 0.12 DVU3234 flagellar biosynthetic protein FliR (TIGR) 0.94 3
Rhodanobacter sp000427505 FW510-R12 0.14 LRK53_RS15080 flagellar M-ring protein FliF 0.21 LRK53_RS15020 flagellar biosynthetic protein FliR low > 59
Rhodopseudomonas palustris CGA009 0.13 TX73_006490 flagellar basal-body MS-ring/collar protein FliF 0.12 TX73_020140 flagellar biosynthetic protein FliR 0.96 13
Desulfovibrio vulgaris Miyazaki F 0.12 DvMF_2287 flagellar M-ring protein FliF (RefSeq) 0.14 DvMF_2016 flagellar biosynthetic protein FliR (RefSeq) 0.94 2
Magnetospirillum magneticum AMB-1 0.12 AMB_RS02590 flagellar M-ring protein FliF 0.14 AMB_RS03185 flagellar type III secretion system protein FliR low > 64
Caulobacter crescentus NA1000 0.12 CCNA_00950 flagellar M-ring protein FliF 0.11 CCNA_01130 flagellar biosynthesis protein FliR 0.88 17
Caulobacter crescentus NA1000 Δfur 0.12 CCNA_00950 flagellar M-ring protein FliF 0.11 CCNA_01130 flagellar biosynthesis protein FliR low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.11 A4249_RS09785 flagellar basal-body MS-ring/collar protein FliF 0.14 A4249_RS15230 flagellar biosynthetic protein FliR 0.49 39
Sinorhizobium meliloti 1021 0.11 SMc03014 flagellar MS-ring protein 0.10 SMc03055 flagellar biosynthesis protein FliR 0.30 29

Not shown: 3 genomes with orthologs for CSW01_10650 only; 21 genomes with orthologs for CSW01_10585 only