Conservation of cofitness between CSW01_03705 and CSW01_03775 in Vibrio cholerae E7946 ATCC 55056

88 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03705 chaperone protein ClpB 1.0 CSW01_03775 exopolyphosphatase 0.49 15
Shewanella amazonensis SB2B 0.80 Sama_2603 clpB protein (RefSeq) 0.29 Sama_2012 guanosine-5'-triphosphate,3'-diphosphate diphosphatase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.80 SO3577 clpB clpB protein (NCBI ptt file) 0.32 SO2185 ppx exopolyphosphatase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.80 Shewana3_3169 ATPase (RefSeq) 0.31 Shewana3_2418 Ppx/GppA phosphatase (RefSeq) low > 73
Shewanella loihica PV-4 0.80 Shew_2948 ATPase (RefSeq) 0.27 Shew_3078 Ppx/GppA phosphatase (RefSeq) low > 60
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.78 GFF4184 ClpB protein 0.47 GFF2166 Exopolyphosphatase (EC 3.6.1.11) low > 78
Alteromonas macleodii MIT1002 0.78 MIT1002_02677 Heat shock protein F84.1 0.40 MIT1002_00871 Exopolyphosphatase low > 70
Enterobacter asburiae PDN3 0.78 EX28DRAFT_2693 ATP-dependent chaperone ClpB 0.49 EX28DRAFT_0165 exopolyphosphatase low > 76
Enterobacter sp. TBS_079 0.78 MPMX20_03461 Chaperone protein ClpB 0.49 MPMX20_03357 Exopolyphosphatase low > 85
Dickeya dianthicola ME23 0.78 DZA65_RS17320 ATP-dependent chaperone ClpB 0.47 DZA65_RS16050 exopolyphosphatase low > 75
Escherichia coli ECRC100 0.78 OKFHMN_21265 clpB ATP-dependent chaperone ClpB 0.46 OKFHMN_21795 ppx exopolyphosphatase low > 79
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_01114 Chaperone protein ClpB 0.46 OHPLBJKB_01224 Exopolyphosphatase low > 74
Escherichia coli ECRC62 0.78 BNILDI_11745 clpB ATP-dependent chaperone ClpB 0.46 BNILDI_12255 ppx exopolyphosphatase low > 75
Escherichia coli BW25113 0.78 b2592 clpB protein disaggregation chaperone (NCBI) 0.46 b2502 ppx exopolyphosphatase (NCBI) low > 76
Escherichia fergusonii Becca 0.78 EFB2_01298 Chaperone protein ClpB 0.46 EFB2_01396 Exopolyphosphatase low > 86
Escherichia coli ECRC99 0.78 KEDOAH_06955 clpB ATP-dependent chaperone ClpB 0.46 KEDOAH_06425 ppx exopolyphosphatase — —
Escherichia coli BL21 0.78 ECD_02482 protein disaggregation chaperone 0.46 ECD_02394 exopolyphosphatase low > 61
Escherichia coli ECRC102 0.78 NIAGMN_19035 clpB ATP-dependent chaperone ClpB 0.46 NIAGMN_19565 ppx exopolyphosphatase low > 80
Escherichia coli ECRC101 0.78 MCAODC_11795 clpB ATP-dependent chaperone ClpB 0.46 MCAODC_12325 ppx exopolyphosphatase low > 87
Escherichia coli ECRC98 0.78 JDDGAC_24930 clpB ATP-dependent chaperone ClpB 0.46 JDDGAC_25740 ppx exopolyphosphatase low > 87
Klebsiella pneumoniae MKP103 0.78 KDGMDA_02125 ATP-dependent chaperone ClpB 0.47 KDGMDA_27820 exopolyphosphatase low > 95
Klebsiella michiganensis M5al 0.78 BWI76_RS21440 ATP-dependent chaperone ClpB 0.48 BWI76_RS21000 exopolyphosphatase low > 92
Escherichia coli ECOR27 0.78 NOLOHH_12940 clpB ATP-dependent chaperone ClpB 0.46 NOLOHH_13445 ppx exopolyphosphatase low > 76
Escherichia coli ECOR38 0.78 HEPCGN_20390 clpB ATP-dependent chaperone ClpB 0.46 HEPCGN_20960 ppx exopolyphosphatase low > 88
Dickeya dianthicola 67-19 0.78 HGI48_RS16225 ATP-dependent chaperone ClpB 0.47 HGI48_RS15230 exopolyphosphatase low > 71
Escherichia coli Nissle 1917 0.78 ECOLIN_RS14665 ATP-dependent chaperone ClpB 0.46 ECOLIN_RS14205 exopolyphosphatase — —
Pectobacterium carotovorum WPP14 0.77 HER17_RS05410 ATP-dependent chaperone ClpB 0.48 HER17_RS06420 exopolyphosphatase low > 75
Dickeya dadantii 3937 0.77 DDA3937_RS16100 ATP-dependent chaperone ClpB 0.47 DDA3937_RS15155 exopolyphosphatase low > 74
Serratia liquefaciens MT49 0.77 IAI46_03995 ATP-dependent chaperone ClpB 0.49 IAI46_18920 exopolyphosphatase low > 87
Pantoea agglomerans CFBP13505 P0401 0.77 PagCFBP13505_RS16530 ATP-dependent chaperone ClpB 0.47 PagCFBP13505_RS15040 exopolyphosphatase low > 74
Pantoea sp. MT58 0.77 IAI47_04435 ATP-dependent chaperone ClpB 0.47 IAI47_05150 exopolyphosphatase low > 76
Rahnella sp. WP5 0.76 EX31_RS07560 ATP-dependent chaperone ClpB 0.49 EX31_RS22675 exopolyphosphatase low > 89
Erwinia amylovora T8 0.76 OLJFJH_09740 ATP-dependent chaperone ClpB 0.47 OLJFJH_10560 exopolyphosphatase low > 58
Erwinia tracheiphila HP pepo 2.2 0.76 IJEDHG_26855 clpB ATP-dependent chaperone ClpB 0.47 IJEDHG_18350 ppx exopolyphosphatase low > 61
Erwinia tracheiphila SCR3 0.76 LU632_RS16935 clpB ATP-dependent chaperone ClpB 0.47 LU632_RS08255 ppx exopolyphosphatase low > 73
Marinobacter adhaerens HP15 0.74 HP15_529 protein disaggregation chaperone 0.32 HP15_228 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase low > 73
Kangiella aquimarina DSM 16071 0.74 B158DRAFT_2535 ATP-dependent chaperone ClpB 0.33 B158DRAFT_2313 Exopolyphosphatase low > 40
Pseudomonas sp. SVBP6 0.72 COO64_RS11065 clpB ATP-dependent chaperone ClpB 0.35 COO64_RS01075 ppx exopolyphosphatase low > 93
Lysobacter sp. OAE881 0.72 ABIE51_RS04925 ATP-dependent chaperone ClpB 0.31 ABIE51_RS14235 exopolyphosphatase low > 62
Pseudomonas sp. RS175 0.71 PFR28_03746 Chaperone protein ClpB 0.34 PFR28_04344 Exopolyphosphatase low > 88
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_5129 ClpB protein 0.35 Pf6N2E2_4454 Exopolyphosphatase (EC 3.6.1.11) low > 103
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_15935 ATP-dependent chaperone ClpB 0.35 AO356_12900 exopolyphosphatase low > 104
Pseudomonas orientalis W4I3 0.71 QF045_RS06815 ATP-dependent chaperone ClpB 0.35 QF045_RS01795 exopolyphosphatase low > 93
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_2824 ClpB protein 0.35 Pf1N1B4_2209 Exopolyphosphatase (EC 3.6.1.11) low > 87
Pseudomonas sp. S08-1 0.71 OH686_16420 ATP-dependent chaperone protein ClpB 0.33 OH686_11275 Exopolyphosphatase low > 80
Pseudomonas lactucae CFBP13502 0.71 GEMAOFIL_00971 Chaperone protein ClpB 0.34 GEMAOFIL_05621 Exopolyphosphatase low > 96
Pseudomonas fluorescens SBW25 0.71 PFLU_RS03880 ATP-dependent chaperone ClpB 0.35 PFLU_RS29090 exopolyphosphatase 0.46 88
Pseudomonas fluorescens SBW25-INTG 0.71 PFLU_RS03880 ATP-dependent chaperone ClpB 0.35 PFLU_RS29090 exopolyphosphatase low > 109
Pseudomonas aeruginosa PA14 0.71 IKLFDK_00820 Chaperone protein ClpB 0.36 IKLFDK_27255 exopolyphosphatase low > 98
Pseudomonas simiae WCS417 0.71 PS417_03830 protein disaggregation chaperone 0.35 PS417_27425 exopolyphosphatase low > 88
Pseudomonas aeruginosa PUPa3 0.71 DQ20_RS56205 clpB;go_function=ATP ATP-dependent chaperone ClpB 0.36 DQ20_RS50040 ppx;go_function=magnesium exopolyphosphatase low > 101
Pseudomonas stutzeri RCH2 0.71 Psest_0711 ATP-dependent chaperone ClpB 0.33 Psest_3731 exopolyphosphatase low > 67
Pseudomonas fluorescens GW456-L13 0.71 PfGW456L13_1495 ClpB protein 0.34 PfGW456L13_875 Exopolyphosphatase (EC 3.6.1.11) low > 87
Pseudomonas aeruginosa MRSN321 0.71 DY961_RS23740 clpB;go_function=ATP ATP-dependent chaperone ClpB 0.36 DY961_RS12080 ppx;go_function=magnesium exopolyphosphatase low > 100
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_14230 ATP-dependent chaperone ClpB 0.35 AO353_08880 exopolyphosphatase low > 101
Xanthomonas campestris pv. campestris strain 8004 0.70 Xcc-8004.1382.1 ClpB protein 0.29 Xcc-8004.4065.1 Exopolyphosphatase (EC 3.6.1.11) low > 74
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_0728 AAA ATPase, central region:Clp, N terminal:Clp, N terminal 0.36 Psyr_0294 Exopolyphosphatase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_0728 AAA ATPase, central region:Clp, N terminal:Clp, N terminal 0.36 Psyr_0294 Exopolyphosphatase low > 86
Pseudomonas sp. BP01 0.70 JOY50_RS27140 clpB ATP-dependent chaperone ClpB 0.34 JOY50_RS22540 ppx exopolyphosphatase low > 84
Pseudomonas sp. DMC3 0.70 GFF4006 Chaperone protein ClpB 0.34 GFF335 Exopolyphosphatase low > 89
Pseudomonas putida KT2440 0.70 PP_0625 Chaperone protein ClpB 0.34 PP_5216 exopolyphosphatase low > 96
Dyella japonica UNC79MFTsu3.2 0.70 ABZR86_RS10940 ATP-dependent chaperone ClpB 0.29 ABZR86_RS00705 Ppx/GppA phosphatase family protein low > 74
Pseudomonas segetis P6 0.70 MPMX49_03920 Chaperone protein ClpB 0.34 MPMX49_04502 Exopolyphosphatase low > 75
Rhodanobacter sp000427505 FW510-R12 0.69 LRK53_RS05055 ATP-dependent chaperone ClpB 0.28 LRK53_RS13600 Ppx/GppA family phosphatase low > 59
Rhodanobacter denitrificans MT42 0.69 LRK55_RS04735 ATP-dependent chaperone ClpB 0.29 LRK55_RS14730 Ppx/GppA phosphatase family protein low > 63
Rhodanobacter sp. FW510-T8 0.69 OKGIIK_01800 clpB ATP-dependent chaperone ClpB 0.29 OKGIIK_03775 ppx exopolyphosphatase low > 53
Rhodanobacter denitrificans FW104-10B01 0.69 LRK54_RS04955 ATP-dependent chaperone ClpB 0.29 LRK54_RS15015 Ppx/GppA family phosphatase low > 59
Methylophilus sp. DMC18 0.68 GFF1788 Chaperone protein ClpB 0.28 GFF2755 Exopolyphosphatase low > 43
Dechlorosoma suillum PS 0.67 Dsui_2161 ATP-dependent chaperone ClpB 0.32 Dsui_2813 exopolyphosphatase low > 51
Paraburkholderia bryophila 376MFSha3.1 0.67 H281DRAFT_00817 ATP-dependent Clp protease ATP-binding subunit ClpB 0.27 H281DRAFT_04419 Ppx/GppA phosphatase low > 103
Paraburkholderia sabiae LMG 24235 0.67 QEN71_RS22370 ATP-dependent chaperone ClpB 0.27 QEN71_RS04855 exopolyphosphatase low > 153
Burkholderia phytofirmans PsJN 0.67 BPHYT_RS08990 protein disaggregation chaperone 0.27 BPHYT_RS14105 exopolyphosphatase low > 109
Ralstonia solanacearum PSI07 0.65 RPSI07_RS17450 ATP-dependent chaperone ClpB 0.28 RPSI07_RS15335 exopolyphosphatase low > 81
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS12455 protein disaggregation chaperone 0.29 RR42_RS13430 exopolyphosphatase low > 128
Ralstonia solanacearum IBSBF1503 0.65 RALBFv3_RS00030 ATP-dependent chaperone ClpB 0.28 RALBFv3_RS02110 exopolyphosphatase low > 76
Ralstonia solanacearum UW163 0.65 UW163_RS13360 ATP-dependent chaperone ClpB 0.28 UW163_RS15420 exopolyphosphatase — —
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS11485 ATP-dependent chaperone ClpB 0.28 ABZR87_RS14060 exopolyphosphatase low > 80
Ralstonia solanacearum GMI1000 0.65 RS_RS06695 chaperone protein ClpB 0.28 RS_RS07710 exopolyphosphatase low > 80
Acidovorax sp. GW101-3H11 0.65 Ac3H11_1474 ClpB protein 0.28 Ac3H11_455 Exopolyphosphatase (EC 3.6.1.11) low > 79
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS10545 protein disaggregation chaperone 0.22 HSERO_RS09440 exopolyphosphatase low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.64 GFF3942 ClpB protein 0.28 GFF4229 Exopolyphosphatase (EC 3.6.1.11) 0.63 4
Acinetobacter radioresistens SK82 0.64 MPMX26_01096 Chaperone protein ClpB 0.34 MPMX26_00569 Exopolyphosphatase low > 36
Acinetobacter baumannii LAC-4 0.63 RR41_RS10060 ATP-dependent chaperone ClpB 0.34 RR41_RS15940 exopolyphosphatase low > 55
Variovorax sp. SCN45 0.63 GFF2792 Chaperone protein ClpB (ATP-dependent unfoldase) 0.28 GFF1091 Exopolyphosphatase (EC 3.6.1.11) low > 127
Variovorax sp. OAS795 0.63 ABID97_RS10930 ATP-dependent chaperone ClpB 0.28 ABID97_RS14590 Ppx/GppA phosphatase family protein low > 91
Castellaniella sp019104865 MT123 0.62 ABCV34_RS06205 ATP-dependent chaperone ClpB 0.28 ABCV34_RS15575 Ppx/GppA phosphatase family protein low > 48
Synechocystis sp000284455 PCC 6803 0.55 SGL_RS11615 ATP-dependent chaperone ClpB 0.16 SGL_RS17865 Ppx/GppA phosphatase family protein low > 52
Synechococcus elongatus PCC 7942 0.55 Synpcc7942_1089 clpB ATPase 0.16 Synpcc7942_1965 ppx exopolyphosphatase low > 38
Echinicola vietnamensis KMM 6221, DSM 17526 0.50 Echvi_0754 ATP-dependent chaperone ClpB 0.16 Echvi_0477 Exopolyphosphatase low > 79

Not shown: 33 genomes with orthologs for CSW01_03705 only; 0 genomes with orthologs for CSW01_03775 only