Conservation of cofitness between CSW01_18760 and CSW01_01045 in Vibrio cholerae E7946 ATCC 55056

84 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_18760 dihydroorotase 1.0 CSW01_01045 DNA helicase RecQ 0.76 6
Shewanella sp. ANA-3 0.77 Shewana3_3263 dihydroorotase (RefSeq) 0.59 Shewana3_3763 ATP-dependent DNA helicase RecQ (RefSeq) low > 73
Shewanella amazonensis SB2B 0.77 Sama_2870 dihydroorotase (RefSeq) 0.57 Sama_0333 ATP-dependent DNA helicase RecQ (RefSeq) low > 62
Shewanella oneidensis MR-1 0.75 SO3695 pyrC dihydroorotase, homodimeric type (NCBI ptt file) 0.58 SO4241 recQ ATP-dependent DNA helicase RecQ (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.74 Shew_0728 dihydroorotase (RefSeq) 0.58 Shew_3474 ATP-dependent DNA helicase RecQ (RefSeq) low > 60
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_3894 dihydroorotase 0.44 Psyr_3738 ATP-dependent DNA helicase RecQ — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_3894 dihydroorotase 0.44 Psyr_3738 ATP-dependent DNA helicase RecQ — —
Pseudomonas sp. DMC3 0.67 GFF5094 Dihydroorotase 0.44 GFF2380 ATP-dependent DNA helicase RecQ — —
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_1747 Dihydroorotase (EC 3.5.2.3) 0.45 PfGW456L13_4423 ATP-dependent DNA helicase RecQ — —
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_744 Dihydroorotase (EC 3.5.2.3) 0.45 Pf1N1B4_3533 ATP-dependent DNA helicase RecQ — —
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_04115 dihydroorotase 0.44 AO353_18430 ATP-dependent DNA helicase RecQ — —
Pseudomonas sp. RS175 0.67 PFR28_03355 Dihydroorotase 0.45 PFR28_00788 ATP-dependent DNA helicase RecQ — —
Pseudomonas sp. SVBP6 0.67 COO64_RS16860 pyrC dihydroorotase 0.46 COO64_RS21845 recQ DNA helicase RecQ — —
Pseudomonas segetis P6 0.67 MPMX49_01445 Dihydroorotase 0.45 MPMX49_02936 ATP-dependent DNA helicase RecQ — —
Pseudomonas fluorescens FW300-N2C3 0.66 AO356_18315 dihydroorotase 0.45 AO356_04050 ATP-dependent DNA helicase RecQ — —
Pseudomonas putida KT2440 0.66 PP_1086 dihydroorotase 0.44 PP_4516 ATP-dependent DNA 3 — —
Pseudomonas simiae WCS417 0.66 PS417_05630 dihydroorotase 0.44 PS417_19950 ATP-dependent DNA helicase RecQ — —
Pseudomonas fluorescens SBW25 0.66 PFLU_RS05715 dihydroorotase 0.44 PFLU_RS21920 DNA helicase RecQ — —
Pseudomonas fluorescens SBW25-INTG 0.66 PFLU_RS05715 dihydroorotase 0.44 PFLU_RS21920 DNA helicase RecQ — —
Pseudomonas sp. BP01 0.66 JOY50_RS14925 pyrC dihydroorotase 0.44 JOY50_RS01155 recQ DNA helicase RecQ — —
Pseudomonas aeruginosa PA14 0.66 IKLFDK_18005 dihydroorotase 0.45 IKLFDK_17145 DNA helicase RecQ — —
Pseudomonas stutzeri RCH2 0.66 Psest_3123 dihydroorotase, homodimeric type 0.44 Psest_1869 ATP-dependent DNA helicase RecQ low > 67
Pseudomonas fluorescens FW300-N2E2 0.66 Pf6N2E2_5588 Dihydroorotase (EC 3.5.2.3) 0.45 Pf6N2E2_2645 ATP-dependent DNA helicase RecQ — —
Pseudomonas lactucae CFBP13502 0.66 GEMAOFIL_01313 Dihydroorotase 0.44 GEMAOFIL_04187 ATP-dependent DNA helicase RecQ — —
Pseudomonas sp. S08-1 0.66 OH686_03940 dihydroorotase, homodimeric type 0.45 OH686_20670 ATP-dependent DNA helicase RecQ — —
Marinobacter adhaerens HP15 0.65 HP15_1216 dihydroorotase, homodimeric type 0.45 HP15_1718 ATP-dependent DNA helicase RecQ low > 73
Ralstonia solanacearum GMI1000 0.65 RS_RS02420 dihydroorotase 0.42 RS_RS15155 DNA helicase RecQ — —
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS07550 dihydroorotase 0.42 ABZR87_RS02880 DNA helicase RecQ — —
Ralstonia solanacearum PSI07 0.64 RPSI07_RS21625 dihydroorotase 0.42 RPSI07_RS10025 DNA helicase RecQ — —
Ralstonia solanacearum UW163 0.64 UW163_RS01995 dihydroorotase 0.42 UW163_RS06400 DNA helicase RecQ — —
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS11590 dihydroorotase 0.42 RALBFv3_RS07220 DNA helicase RecQ — —
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS19235 dihydroorotase 0.44 HSERO_RS02465 ATP-dependent DNA helicase RecQ — —
Cupriavidus basilensis FW507-4G11 0.62 RR42_RS02610 dihydroorotase 0.42 RR42_RS19310 ATP-dependent DNA helicase RecQ — —
Acidovorax sp. GW101-3H11 0.62 Ac3H11_1963 Dihydroorotase (EC 3.5.2.3) 0.41 Ac3H11_3308 ATP-dependent DNA helicase RecQ — —
Paraburkholderia graminis OAS925 0.62 ABIE53_003505 dihydroorotase 0.43 ABIE53_003792 ATP-dependent DNA helicase RecQ — —
Paraburkholderia sabiae LMG 24235 0.61 QEN71_RS26855 dihydroorotase 0.43 QEN71_RS28295 DNA helicase RecQ low > 153
Paraburkholderia bryophila 376MFSha3.1 0.61 H281DRAFT_04265 dihydroorotase 0.42 H281DRAFT_06595 ATP-dependent DNA helicase RecQ — —
Methylophilus sp. DMC18 0.61 GFF2451 Dihydroorotase 0.43 GFF2139 ATP-dependent DNA helicase RecQ — —
Burkholderia phytofirmans PsJN 0.61 BPHYT_RS16675 dihydroorotase 0.43 BPHYT_RS18145 ATP-dependent DNA helicase RecQ low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF523 Dihydroorotase (EC 3.5.2.3) 0.42 GFF1958 ATP-dependent DNA helicase RecQ low > 90
Alteromonas macleodii MIT1002 0.61 MIT1002_03750 Dihydroorotase 0.54 MIT1002_00148 ATP-dependent DNA helicase RecQ — —
Dechlorosoma suillum PS 0.60 Dsui_0250 dihydroorotase, homodimeric type 0.42 Dsui_3092 ATP-dependent DNA helicase RecQ — —
Rhodanobacter sp000427505 FW510-R12 0.59 LRK53_RS03690 dihydroorotase 0.44 LRK53_RS15600 DNA helicase RecQ low > 59
Variovorax sp. OAS795 0.59 ABID97_RS06040 dihydroorotase 0.44 ABID97_RS03395 DNA helicase RecQ — —
Variovorax sp. SCN45 0.59 GFF4557 Dihydroorotase (EC 3.5.2.3) 0.42 GFF6415 ATP-dependent DNA helicase RecQ low > 127
Rhodanobacter denitrificans FW104-10B01 0.59 LRK54_RS10900 dihydroorotase 0.45 LRK54_RS13000 DNA helicase RecQ — —
Rhodanobacter denitrificans MT42 0.57 LRK55_RS10600 dihydroorotase 0.45 LRK55_RS12700 DNA helicase RecQ low > 63
Rhodanobacter sp. FW510-T8 0.57 OKGIIK_12970 pyrC dihydroorotase 0.44 OKGIIK_02375 recQ DNA helicase RecQ — —
Castellaniella sp019104865 MT123 0.57 ABCV34_RS09730 dihydroorotase 0.40 ABCV34_RS07985 DNA helicase RecQ — —
Erwinia tracheiphila SCR3 0.57 LU632_RS10340 pyrC dihydroorotase 0.66 LU632_RS24095 recQ ATP-dependent DNA helicase RecQ low > 74
Erwinia tracheiphila HP pepo 2.2 0.57 IJEDHG_20990 pyrC dihydroorotase 0.66 IJEDHG_08740 recQ ATP-dependent DNA helicase RecQ low > 61
Serratia liquefaciens MT49 0.57 IAI46_09740 dihydroorotase 0.66 IAI46_00770 ATP-dependent DNA helicase RecQ low > 86
Enterobacter sp. TBS_079 0.57 MPMX20_01741 Dihydroorotase 0.66 MPMX20_04458 ATP-dependent DNA helicase RecQ low > 85
Enterobacter asburiae PDN3 0.57 EX28DRAFT_1869 dihydroorotase (EC 3.5.2.3) 0.66 EX28DRAFT_4487 ATP-dependent DNA helicase RecQ — —
Erwinia amylovora T8 0.56 OLJFJH_15670 dihydroorotase 0.66 OLJFJH_06445 ATP-dependent DNA helicase RecQ low > 58
Dickeya dadantii 3937 0.56 DDA3937_RS13170 dihydroorotase 0.66 DDA3937_RS19850 ATP-dependent DNA helicase RecQ low > 74
Klebsiella pneumoniae MKP103 0.56 KDGMDA_18610 dihydroorotase 0.67 KDGMDA_09735 ATP-dependent DNA helicase RecQ low > 95
Pectobacterium carotovorum WPP14 0.56 HER17_RS08600 dihydroorotase 0.65 HER17_RS01395 ATP-dependent DNA helicase RecQ low > 75
Dickeya dianthicola ME23 0.55 DZA65_RS13710 dihydroorotase 0.66 DZA65_RS21045 ATP-dependent DNA helicase RecQ low > 75
Rahnella sp. WP5 0.55 EX31_RS24385 dihydroorotase 0.65 EX31_RS15210 ATP-dependent DNA helicase RecQ low > 89
Klebsiella michiganensis M5al 0.55 BWI76_RS10990 dihydroorotase 0.66 BWI76_RS01245 DNA helicase RecQ low > 92
Escherichia coli ECRC100 0.55 OKFHMN_03730 pyrC dihydroorotase 0.67 OKFHMN_14360 recQ ATP-dependent DNA helicase RecQ low > 79
Escherichia coli ECRC62 0.55 BNILDI_19420 pyrC dihydroorotase 0.67 BNILDI_05040 recQ ATP-dependent DNA helicase RecQ low > 75
Escherichia coli ECRC102 0.55 NIAGMN_24100 pyrC dihydroorotase 0.67 NIAGMN_12115 recQ ATP-dependent DNA helicase RecQ low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_02603 Dihydroorotase 0.67 OHPLBJKB_04229 ATP-dependent DNA helicase RecQ low > 74
Escherichia coli ECRC98 0.55 JDDGAC_07390 pyrC dihydroorotase 0.67 JDDGAC_17985 recQ ATP-dependent DNA helicase RecQ low > 87
Escherichia coli ECRC99 0.55 KEDOAH_24025 pyrC dihydroorotase 0.67 KEDOAH_13790 recQ ATP-dependent DNA helicase RecQ — —
Escherichia fergusonii Becca 0.55 EFB2_02912 Dihydroorotase 0.67 EFB2_04815 ATP-dependent DNA helicase RecQ low > 86
Escherichia coli BL21 0.55 ECD_01058 dihydro-orotase 0.66 ECD_03701 ATP-dependent DNA helicase low > 61
Escherichia coli ECRC101 0.55 MCAODC_23090 pyrC dihydroorotase 0.67 MCAODC_04865 recQ ATP-dependent DNA helicase RecQ low > 88
Escherichia coli ECOR27 0.55 NOLOHH_21260 pyrC dihydroorotase 0.67 NOLOHH_06490 recQ ATP-dependent DNA helicase RecQ low > 76
Escherichia coli BW25113 0.55 b1062 pyrC dihydroorotase (NCBI) 0.67 b3822 recQ ATP-dependent DNA helicase (NCBI) low > 76
Pantoea agglomerans CFBP13505 P0401 0.55 PagCFBP13505_RS05115 dihydroorotase 0.66 PagCFBP13505_RS15340 ATP-dependent DNA helicase RecQ low > 74
Dickeya dianthicola 67-19 0.55 HGI48_RS13235 dihydroorotase 0.66 HGI48_RS20005 ATP-dependent DNA helicase RecQ low > 71
Escherichia coli ECOR38 0.55 HEPCGN_23760 pyrC dihydroorotase 0.67 HEPCGN_13060 recQ ATP-dependent DNA helicase RecQ low > 88
Escherichia coli Nissle 1917 0.55 ECOLIN_RS06160 dihydroorotase 0.67 ECOLIN_RS21935 ATP-dependent DNA helicase RecQ low > 55
Pantoea sp. MT58 0.54 IAI47_12215 dihydroorotase 0.67 IAI47_18360 ATP-dependent DNA helicase RecQ low > 76
Azospirillum sp. SherDot2 0.53 MPMX19_01633 Dihydroorotase 0.41 MPMX19_00123 ATP-dependent DNA helicase RecQ — —
Sinorhizobium meliloti 1021 0.53 SMc02166 dihydroorotase 0.42 SMc01566 ATP-dependent DNA helicase low > 103
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.53 GFF3342 Dihydroorotase (EC 3.5.2.3) 0.65 GFF248 ATP-dependent DNA helicase RecQ low > 78
Agrobacterium fabrum C58 0.53 Atu0399 dihydroorotase 0.44 Atu0061 ATP-dependent DNA helicase low > 89
Azospirillum brasilense Sp245 0.52 AZOBR_RS04460 dihydroorotase 0.42 AZOBR_RS02840 ATP-dependent DNA helicase RecQ low > 97
Rhizobium sp. OAE497 0.52 ABIE40_RS02105 dihydroorotase 0.44 ABIE40_RS12745 DNA helicase RecQ — —
Phaeobacter inhibens DSM 17395 0.52 PGA1_c10910 dihydroorotase PyrC 0.42 PGA1_c31900 ATP-dependent DNA helicase RecQ low > 62
Dinoroseobacter shibae DFL-12 0.51 Dshi_2371 dihydroorotase, homodimeric type (RefSeq) 0.43 Dshi_3334 ATP-dependent DNA helicase RecQ (RefSeq) low > 64

Not shown: 4 genomes with orthologs for CSW01_18760 only; 26 genomes with orthologs for CSW01_01045 only