Conservation of cofitness between CSW01_00065 and CSW01_00470 in Vibrio cholerae E7946 ATCC 55056

84 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00065 DNA replication and repair protein RecF 1.0 CSW01_00470 twin-arginine translocase subunit TatC 0.66 8
Erwinia amylovora T8 0.57 OLJFJH_05150 DNA replication/repair protein RecF 0.72 OLJFJH_06525 Sec-independent protein translocase subunit TatC low > 58
Serratia liquefaciens MT49 0.56 IAI46_00015 DNA replication/repair protein RecF 0.72 IAI46_01090 Sec-independent protein translocase subunit TatC low > 86
Pantoea sp. MT58 0.56 IAI47_00015 DNA replication/repair protein RecF 0.71 IAI47_18260 Sec-independent protein translocase subunit TatC — —
Erwinia tracheiphila SCR3 0.55 LU632_RS00015 recF DNA replication/repair protein RecF 0.71 LU632_RS23980 tatC Sec-independent protein translocase subunit TatC low > 74
Rahnella sp. WP5 0.55 EX31_RS05975 DNA replication/repair protein RecF 0.73 EX31_RS14600 Sec-independent protein translocase subunit TatC low > 89
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_00003 DNA replication and repair protein RecF 0.72 OHPLBJKB_04213 Sec-independent protein translocase protein TatC low > 73
Escherichia coli BW25113 0.55 b3700 recF recombination protein F (NCBI) 0.72 b3839 tatC TatABCE protein translocation system subunit (NCBI) low > 76
Dickeya dadantii 3937 0.55 DDA3937_RS21285 DNA replication/repair protein RecF 0.75 DDA3937_RS20305 Sec-independent protein translocase subunit TatC 0.50 19
Escherichia fergusonii Becca 0.55 EFB2_00003 DNA replication and repair protein RecF 0.71 EFB2_04777 Sec-independent protein translocase protein TatC low > 86
Escherichia coli ECOR38 0.55 HEPCGN_13720 recF DNA replication/repair protein RecF 0.72 HEPCGN_12905 tatC Sec-independent protein translocase subunit TatC — —
Pectobacterium carotovorum WPP14 0.55 HER17_RS00015 DNA replication/repair protein RecF 0.72 HER17_RS20585 Sec-independent protein translocase subunit TatC low > 75
Escherichia coli ECRC62 0.55 BNILDI_04365 recF DNA replication/repair protein RecF 0.72 BNILDI_05125 tatC Sec-independent protein translocase subunit TatC low > 75
Escherichia coli Nissle 1917 0.55 ECOLIN_RS21310 DNA replication/repair protein RecF 0.71 ECOLIN_RS22140 Sec-independent protein translocase subunit TatC 0.74 2
Escherichia coli ECRC100 0.55 OKFHMN_15025 recF DNA replication/repair protein RecF 0.72 OKFHMN_14275 tatC Sec-independent protein translocase subunit TatC low > 80
Escherichia coli ECOR27 0.55 NOLOHH_07165 recF DNA replication/repair protein RecF 0.72 NOLOHH_06405 tatC Sec-independent protein translocase subunit TatC low > 75
Escherichia coli ECRC99 0.55 KEDOAH_13125 recF DNA replication/repair protein RecF 0.72 KEDOAH_13875 tatC Sec-independent protein translocase subunit TatC — —
Escherichia coli ECRC98 0.55 JDDGAC_18645 recF DNA replication/repair protein RecF 0.72 JDDGAC_17900 tatC Sec-independent protein translocase subunit TatC low > 86
Escherichia coli ECRC101 0.55 MCAODC_05535 recF DNA replication/repair protein RecF 0.72 MCAODC_04780 tatC Sec-independent protein translocase subunit TatC low > 87
Escherichia coli ECRC102 0.55 NIAGMN_12780 recF DNA replication/repair protein RecF 0.72 NIAGMN_12030 tatC Sec-independent protein translocase subunit TatC — —
Escherichia coli BL21 0.55 ECD_03583 gap repair protein 0.72 ECD_03731 TatABCE protein translocation system subunit 0.69 16
Dickeya dianthicola 67-19 0.55 HGI48_RS00015 DNA replication/repair protein RecF 0.71 HGI48_RS00920 Sec-independent protein translocase subunit TatC low > 71
Dickeya dianthicola ME23 0.55 DZA65_RS00015 DNA replication/repair protein RecF 0.74 DZA65_RS00980 Sec-independent protein translocase subunit TatC low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF1756 DNA recombination and repair protein RecF 0.72 GFF265 Twin-arginine translocation protein TatC 0.64 10
Klebsiella michiganensis M5al 0.54 BWI76_RS00010 DNA replication and repair protein RecF 0.73 BWI76_RS01330 twin-arginine translocase subunit TatC low > 92
Enterobacter sp. TBS_079 0.54 MPMX20_00003 DNA replication and repair protein RecF 0.70 MPMX20_04442 Sec-independent protein translocase protein TatC low > 85
Enterobacter asburiae PDN3 0.54 EX28DRAFT_3987 DNA replication and repair protein RecF 0.70 EX28DRAFT_4503 Twin arginine targeting (Tat) protein translocase TatC low > 76
Shewanella loihica PV-4 0.46 Shew_0003 DNA replication and repair protein RecF (RefSeq) 0.70 Shew_3378 Sec-independent protein translocase, TatC subunit (RefSeq) low > 60
Shewanella oneidensis MR-1 0.45 SO0010 recF DNA replication and repair protein RecF (NCBI ptt file) 0.70 SO4204 tatC Sec-independent periplasmic protein translocation protein TatC (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.45 Shewana3_0011 recF recombination protein F (RefSeq) 0.64 Shewana3_3730 Sec-independent protein translocase TatC (RefSeq) low > 73
Shewanella amazonensis SB2B 0.44 Sama_0015 recF recombination protein F (RefSeq) 0.62 Sama_3207 Sec-independent periplasmic protein translocation protein TatC (RefSeq) low > 62
Pseudomonas aeruginosa PA14 0.38 IKLFDK_25545 DNA replication/repair protein RecF 0.61 IKLFDK_28175 twin-arginine translocase subunit TatC 0.69 66
Pseudomonas sp. S08-1 0.38 OH686_12620 DNA recombination and repair protein RecF 0.60 OH686_10180 twin arginine-targeting protein translocase TatC — —
Pseudomonas stutzeri RCH2 0.38 Psest_0004 recF protein 0.59 Psest_3947 Twin arginine targeting (Tat) protein translocase TatC — —
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_1927 DNA recombination and repair protein RecF 0.63 Pf1N1B4_1569 Twin-arginine translocation protein TatC low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_0003 DNA replication and repair protein RecF 0.62 Psyr_0382 Sec-independent periplasmic protein translocase low > 86
Pseudomonas sp. DMC3 0.38 GFF578 DNA replication and repair protein RecF 0.63 GFF3069 Sec-independent protein translocase protein TatC — —
Pseudomonas sp. RS175 0.38 PFR28_04593 DNA replication and repair protein RecF 0.63 PFR28_04982 Sec-independent protein translocase protein TatC — —
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_0003 DNA replication and repair protein RecF 0.62 Psyr_0382 Sec-independent periplasmic protein translocase — —
Pseudomonas sp. BP01 0.38 JOY50_RS08340 recF DNA replication/repair protein RecF 0.61 JOY50_RS09600 tatC twin-arginine translocase subunit TatC — —
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_10480 recombinase RecF 0.63 AO353_12345 twin-arginine protein translocation system subunit TatC low > 101
Pseudomonas fluorescens FW300-N2C3 0.37 AO356_11635 recombinase RecF 0.63 AO356_09540 twin-arginine protein translocation system subunit TatC low > 104
Pseudomonas fluorescens SBW25 0.37 PFLU_RS00015 DNA replication/repair protein RecF 0.64 PFLU_RS01880 twin-arginine translocase subunit TatC low > 109
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS00015 DNA replication/repair protein RecF 0.64 PFLU_RS01880 twin-arginine translocase subunit TatC low > 109
Pseudomonas sp. SVBP6 0.37 COO64_RS02120 recF DNA replication/repair protein RecF 0.62 COO64_RS13480 tatC twin-arginine translocase subunit TatC — —
Pseudomonas putida KT2440 0.37 PP_0012 DNA replication and repair protein 0.62 PP_5018 sec-independent protein translocase protein — —
Pseudomonas simiae WCS417 0.37 PS417_00015 recombinase RecF 0.62 PS417_01835 twin-arginine protein translocation system subunit TatC — —
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_664 DNA recombination and repair protein RecF 0.63 PfGW456L13_306 Twin-arginine translocation protein TatC — —
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_4197 DNA recombination and repair protein RecF 0.63 Pf6N2E2_3786 Twin-arginine translocation protein TatC low > 103
Alteromonas macleodii MIT1002 0.35 MIT1002_00003 DNA replication and repair protein RecF 0.64 MIT1002_00508 Sec-independent protein translocase protein TatC — —
Kangiella aquimarina DSM 16071 0.32 B158DRAFT_0366 DNA replication and repair protein RecF 0.55 B158DRAFT_0738 Twin arginine targeting (Tat) protein translocase TatC low > 40
Acinetobacter radioresistens SK82 0.30 MPMX26_00003 DNA replication and repair protein RecF 0.44 MPMX26_00396 Sec-independent protein translocase protein TatC 0.48 11
Marinobacter adhaerens HP15 0.29 HP15_3705 DNA replication and repair protein recF 0.63 HP15_3198 Sec-independent protein translocase, TatC subunit — —
Lysobacter sp. OAE881 0.25 ABIE51_RS00765 DNA replication/repair protein RecF 0.49 ABIE51_RS01265 twin-arginine translocase subunit TatC low > 62
Dyella japonica UNC79MFTsu3.2 0.25 ABZR86_RS15145 DNA replication/repair protein RecF 0.49 ABZR86_RS13370 twin-arginine translocase subunit TatC low > 74
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.4.1 DNA recombination and repair protein RecF 0.49 Xcc-8004.5202.1 Twin-arginine translocation protein TatC low > 74
Rhodanobacter sp000427505 FW510-R12 0.25 LRK53_RS00015 DNA replication/repair protein RecF 0.43 LRK53_RS03950 twin-arginine translocase subunit TatC — —
Rhodanobacter denitrificans FW104-10B01 0.25 LRK54_RS08475 DNA replication/repair protein RecF 0.48 LRK54_RS11070 twin-arginine translocase subunit TatC — —
Rhodanobacter denitrificans MT42 0.25 LRK55_RS08240 DNA replication/repair protein RecF 0.48 LRK55_RS10775 twin-arginine translocase subunit TatC — —
Rhodanobacter sp. FW510-T8 0.23 OKGIIK_15255 recF DNA replication/repair protein RecF 0.49 OKGIIK_12805 tatC twin-arginine translocase subunit TatC — —
Phocaeicola vulgatus CL09T03C04 0.16 HMPREF1058_RS17135 DNA replication and repair protein RecF 0.23 HMPREF1058_RS05020 twin-arginine translocase subunit TatC low > 67
Mucilaginibacter yixingensis YX-36 DSM 26809 0.16 ABZR88_RS21650 DNA replication/repair protein RecF 0.21 ABZR88_RS00175 twin-arginine translocase subunit TatC — —
Bacteroides ovatus ATCC 8483 0.16 BACOVA_05088 DNA replication and repair protein RecF 0.20 BACOVA_04894 twin arginine-targeting protein translocase TatC low > 94
Pedobacter sp. GW460-11-11-14-LB5 0.16 CA265_RS24760 DNA replication and repair protein RecF 0.23 CA265_RS18375 twin-arginine translocase subunit TatC — —
Phocaeicola dorei CL03T12C01 0.16 ABI39_RS13135 DNA replication and repair protein RecF 0.23 ABI39_RS18845 twin-arginine translocase subunit TatC low > 72
Rhizobium sp. OAE497 0.15 ABIE40_RS00200 DNA replication/repair protein RecF 0.33 ABIE40_RS08470 twin-arginine translocase subunit TatC — —
Cellulophaga baltica 18 0.15 M666_RS11055 DNA replication and repair protein RecF 0.24 M666_RS10580 twin-arginine translocase subunit TatC — —
Bosea sp. OAE506 0.14 ABIE41_RS04170 DNA replication/repair protein RecF 0.29 ABIE41_RS15005 twin-arginine translocase subunit TatC — —
Sinorhizobium meliloti 1021 0.14 SMc02863 recombination protein F 0.33 SMc02065 SEC-independent translocase transmembrane protein — —
Agrobacterium fabrum C58 0.14 Atu0073 recF-like protein 0.31 Atu1704 SEC-independent protein translocase protein — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.14 Echvi_1156 recF protein 0.22 Echvi_1187 Twin arginine targeting (Tat) protein translocase TatC — —
Parabacteroides merdae CL09T00C40 0.14 HMPREF1078_RS14620 DNA replication and repair protein RecF 0.20 HMPREF1078_RS03715 twin-arginine translocase subunit TatC low > 61
Sphingomonas koreensis DSMZ 15582 0.13 Ga0059261_2727 DNA replication and repair protein RecF 0.26 Ga0059261_3486 Twin arginine targeting (Tat) protein translocase TatC — —
Mycobacterium tuberculosis H37Rv 0.13 Rv0003 DNA replication and repair protein RecF (single-strand DNA binding protein) 0.23 Rv2093c Sec-independent protein translocase transmembrane protein TatC — —
Azospirillum sp. SherDot2 0.13 MPMX19_02716 DNA replication and repair protein RecF 0.37 MPMX19_04320 Sec-independent protein translocase protein TatC — —
Rhodopseudomonas palustris CGA009 0.12 TX73_000015 DNA replication/repair protein RecF 0.32 TX73_014745 twin-arginine translocase subunit TatC — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.12 CA264_17475 DNA replication and repair protein RecF 0.19 CA264_17040 twin-arginine translocase subunit TatC — —
Phaeobacter inhibens DSM 17395 0.12 PGA1_c00030 DNA replication and repair protein RecF 0.25 PGA1_c10720 putative sec-independent protein translocase protein TatC — —
Dinoroseobacter shibae DFL-12 0.12 Dshi_3375 SMC domain protein (RefSeq) 0.22 Dshi_1345 Sec-independent protein translocase, TatC subunit (RefSeq) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.12 A4249_RS15360 DNA replication/repair protein RecF 0.27 A4249_RS05665 twin-arginine translocase subunit TatC — —
Synechocystis sp000284455 PCC 6803 0.11 SGL_RS07025 DNA replication/repair protein RecF 0.24 SGL_RS13635 twin-arginine translocase subunit TatC — —
Azospirillum brasilense Sp245 0.11 AZOBR_RS17670 recombinase RecF 0.39 AZOBR_RS15480 preprotein translocase subunit TatC — —
Xanthobacter sp. DMC5 0.11 GFF3876 DNA replication and repair protein RecF 0.30 GFF557 Sec-independent protein translocase protein TatC — —
Magnetospirillum magneticum AMB-1 0.11 AMB_RS03285 DNA replication and repair protein RecF 0.34 AMB_RS12685 twin-arginine translocase subunit TatC — —
Synechococcus elongatus PCC 7942 0.09 Synpcc7942_2250 recF recombination protein F 0.23 Synpcc7942_1578 tatC Sec-independent protein translocase TatC — —

Not shown: 5 genomes with orthologs for CSW01_00065 only; 22 genomes with orthologs for CSW01_00470 only