Conservation of cofitness between BPHYT_RS33900 and BPHYT_RS14915 in Burkholderia phytofirmans PsJN

78 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS33900 3-isopropylmalate dehydrogenase 1.0 BPHYT_RS14915 phosphoserine aminotransferase 0.92 17
Paraburkholderia graminis OAS925 0.98 ABIE53_004804 3-isopropylmalate dehydrogenase 0.81 ABIE53_003159 phosphoserine aminotransferase 0.91 10
Paraburkholderia bryophila 376MFSha3.1 0.98 H281DRAFT_06072 3-isopropylmalate dehydrogenase 0.96 H281DRAFT_03926 phosphoserine aminotransferase apoenzyme 0.62 19
Paraburkholderia sabiae LMG 24235 0.96 QEN71_RS17620 3-isopropylmalate dehydrogenase 0.93 QEN71_RS04065 3-phosphoserine/phosphohydroxythreonine transaminase 0.80 14
Ralstonia sp. UNC404CL21Col 0.89 ABZR87_RS14530 3-isopropylmalate dehydrogenase 0.66 ABZR87_RS09445 3-phosphoserine/phosphohydroxythreonine transaminase 0.87 19
Cupriavidus basilensis FW507-4G11 0.89 RR42_RS14385 3-isopropylmalate dehydrogenase 0.67 RR42_RS04455 MFS transporter — —
Ralstonia solanacearum PSI07 0.89 RPSI07_RS14705 3-isopropylmalate dehydrogenase 0.65 RPSI07_RS19715 3-phosphoserine/phosphohydroxythreonine transaminase 0.69 11
Ralstonia solanacearum UW163 0.89 UW163_RS11115 3-isopropylmalate dehydrogenase 0.66 UW163_RS16055 3-phosphoserine/phosphohydroxythreonine transaminase — —
Ralstonia solanacearum GMI1000 0.89 RS_RS09990 3-isopropylmalate dehydrogenase 0.67 RS_RS04490 3-phosphoserine/phosphohydroxythreonine aminotransferase low > 80
Ralstonia solanacearum IBSBF1503 0.89 RALBFv3_RS02610 3-isopropylmalate dehydrogenase 0.66 RALBFv3_RS13755 3-phosphoserine/phosphohydroxythreonine transaminase 0.61 8
Herbaspirillum seropedicae SmR1 0.86 HSERO_RS16500 3-isopropylmalate dehydrogenase 0.66 HSERO_RS18435 MFS transporter — —
Variovorax sp. SCN45 0.79 GFF3888 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.64 GFF6183 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Acidovorax sp. GW101-3H11 0.79 Ac3H11_1528 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.64 Ac3H11_2573 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Variovorax sp. OAS795 0.79 ABID97_RS08455 3-isopropylmalate dehydrogenase 0.61 ABID97_RS09520 3-phosphoserine/phosphohydroxythreonine transaminase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.77 GFF3360 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.65 GFF5342 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Castellaniella sp019104865 MT123 0.75 ABCV34_RS04280 3-isopropylmalate dehydrogenase 0.55 ABCV34_RS07115 3-phosphoserine/phosphohydroxythreonine transaminase — —
Dechlorosoma suillum PS 0.68 Dsui_3198 3-isopropylmalate dehydrogenase 0.57 Dsui_1939 phosphoserine aminotransferase — —
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_20635 3-isopropylmalate dehydrogenase 0.56 AO353_02075 3-phosphoserine/phosphohydroxythreonine aminotransferase 0.89 21
Pseudomonas fluorescens FW300-N1B4 0.65 Pf1N1B4_12 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.44 Pf1N1B4_351 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_21415 3-isopropylmalate dehydrogenase 0.55 AO356_03470 3-phosphoserine/phosphohydroxythreonine aminotransferase — —
Pseudomonas putida KT2440 0.64 PP_1988 3-isopropylmalate dehydrogenase 0.55 PP_1768 phosphoserine aminotransferase — —
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_66 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.55 Pf6N2E2_2521 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_3945 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.55 PfGW456L13_2175 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Pseudomonas sp. RS175 0.64 PFR28_02821 3-isopropylmalate dehydrogenase 0.56 PFR28_00906 Phosphoserine aminotransferase — —
Marinobacter adhaerens HP15 0.64 HP15_1832 3-isopropylmalate dehydrogenase 0.52 HP15_1361 phosphoserine aminotransferase — —
Pseudomonas simiae WCS417 0.64 PS417_18585 3-isopropylmalate dehydrogenase 0.55 PS417_08120 MFS transporter — —
Pseudomonas fluorescens SBW25 0.63 PFLU_RS20565 3-isopropylmalate dehydrogenase 0.55 PFLU_RS08090 3-phosphoserine/phosphohydroxythreonine transaminase — —
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS20565 3-isopropylmalate dehydrogenase 0.55 PFLU_RS08090 3-phosphoserine/phosphohydroxythreonine transaminase — —
Kangiella aquimarina DSM 16071 0.63 B158DRAFT_1322 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.48 B158DRAFT_2322 phosphoserine aminotransferase apoenzyme (EC 2.6.1.52) — —
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_1985 3-isopropylmalate dehydrogenase 0.56 Psyr_3646 phosphoserine aminotransferase apoenzyme — —
Pseudomonas stutzeri RCH2 0.63 Psest_2589 3-isopropylmalate dehydrogenase 0.56 Psest_1983 phosphoserine aminotransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_1985 3-isopropylmalate dehydrogenase 0.56 Psyr_3646 phosphoserine aminotransferase apoenzyme — —
Pseudomonas sp. S08-1 0.62 OH686_04470 3-isopropylmalate dehydrogenase 0.57 OH686_20865 phosphoserine transaminase — —
Xanthomonas campestris pv. campestris strain 8004 0.60 Xcc-8004.1053.1 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.48 Xcc-8004.3283.1 Phosphoserine aminotransferase (EC 2.6.1.52) 0.88 16
Acinetobacter radioresistens SK82 0.59 MPMX26_00348 3-isopropylmalate dehydrogenase 0.52 MPMX26_02219 Phosphoserine aminotransferase — —
Serratia liquefaciens MT49 0.51 IAI46_03350 3-isopropylmalate dehydrogenase 0.53 IAI46_08635 3-phosphoserine/phosphohydroxythreonine transaminase 0.53 52
Alteromonas macleodii MIT1002 0.51 MIT1002_00948 3-isopropylmalate dehydrogenase 0.49 MIT1002_02192 Phosphoserine aminotransferase — —
Klebsiella michiganensis M5al 0.50 BWI76_RS04675 3-isopropylmalate dehydrogenase 0.53 BWI76_RS09755 phosphoserine transaminase 0.83 40
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.50 GFF165 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.54 GFF3664 Phosphoserine aminotransferase (EC 2.6.1.52) low > 78
Rahnella sp. WP5 0.50 EX31_RS03685 3-isopropylmalate dehydrogenase 0.54 EX31_RS18255 3-phosphoserine/phosphohydroxythreonine transaminase low > 89
Dickeya dianthicola ME23 0.50 DZA65_RS19205 3-isopropylmalate dehydrogenase 0.54 DZA65_RS09990 3-phosphoserine/phosphohydroxythreonine transaminase low > 75
Pectobacterium carotovorum WPP14 0.49 HER17_RS03080 3-isopropylmalate dehydrogenase 0.53 HER17_RS12290 3-phosphoserine/phosphohydroxythreonine transaminase — —
Dickeya dianthicola 67-19 0.49 HGI48_RS18060 3-isopropylmalate dehydrogenase 0.55 HGI48_RS09680 3-phosphoserine/phosphohydroxythreonine transaminase — —
Dickeya dadantii 3937 0.49 DDA3937_RS18120 3-isopropylmalate dehydrogenase 0.55 DDA3937_RS09670 3-phosphoserine/phosphohydroxythreonine transaminase low > 74
Enterobacter sp. TBS_079 0.49 MPMX20_00768 3-isopropylmalate dehydrogenase 0.55 MPMX20_01566 Phosphoserine aminotransferase 0.86 32
Enterobacter asburiae PDN3 0.49 EX28DRAFT_3669 3-isopropylmalate dehydrogenase 0.52 EX28DRAFT_2028 phosphoserine aminotransferase apoenzyme (EC 2.6.1.52) — —
Escherichia coli ECOR38 0.49 HEPCGN_08700 leuB 3-isopropylmalate dehydrogenase 0.56 HEPCGN_23030 serC 3-phosphoserine/phosphohydroxythreonine transaminase 0.89 61
Escherichia fergusonii Becca 0.49 EFB2_03972 3-isopropylmalate dehydrogenase 0.56 EFB2_03157 Phosphoserine aminotransferase 0.57 9
Escherichia coli Nissle 1917 0.49 ECOLIN_RS00395 3-isopropylmalate dehydrogenase 0.56 ECOLIN_RS04805 3-phosphoserine/phosphohydroxythreonine transaminase 0.87 21
Escherichia coli ECRC101 0.49 MCAODC_01235 leuB 3-isopropylmalate dehydrogenase 0.55 MCAODC_24880 serC 3-phosphoserine/phosphohydroxythreonine transaminase 0.72 73
Escherichia coli ECRC99 0.49 KEDOAH_17435 leuB 3-isopropylmalate dehydrogenase 0.55 KEDOAH_22245 serC 3-phosphoserine/phosphohydroxythreonine transaminase — —
Escherichia coli ECRC102 0.49 NIAGMN_08570 leuB 3-isopropylmalate dehydrogenase 0.55 NIAGMN_03210 serC 3-phosphoserine/phosphohydroxythreonine transaminase — —
Escherichia coli ECRC100 0.49 OKFHMN_10720 leuB 3-isopropylmalate dehydrogenase 0.55 OKFHMN_05490 serC 3-phosphoserine/phosphohydroxythreonine transaminase 0.91 60
Escherichia coli ECRC98 0.49 JDDGAC_14315 leuB 3-isopropylmalate dehydrogenase 0.55 JDDGAC_09100 serC 3-phosphoserine/phosphohydroxythreonine transaminase 0.70 76
Escherichia coli ECOR27 0.49 NOLOHH_03065 leuA 2-isopropylmalate synthase 0.55 NOLOHH_22050 serC 3-phosphoserine/phosphohydroxythreonine transaminase 0.89 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.49 OHPLBJKB_03584 3-isopropylmalate dehydrogenase 0.55 OHPLBJKB_02761 Phosphoserine aminotransferase — —
Escherichia coli BL21 0.49 ECD_00075 3-isopropylmalate dehydrogenase, NAD(+)-dependent 0.55 ECD_00911 3-phosphoserine/phosphohydroxythreonine aminotransferase 0.90 26
Escherichia coli ECRC62 0.49 BNILDI_08545 leuA 2-isopropylmalate synthase 0.55 BNILDI_20305 serC 3-phosphoserine/phosphohydroxythreonine transaminase 0.86 70
Escherichia coli BW25113 0.49 b0073 leuB 3-isopropylmalate dehydrogenase (VIMSS) 0.55 b0907 serC phosphoserine aminotransferase (NCBI) 0.87 53
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_12600 3-isopropylmalate dehydrogenase 0.49 CSW01_05875 3-phosphoserine/phosphohydroxythreonine transaminase — —
Shewanella loihica PV-4 0.48 Shew_3471 3-isopropylmalate dehydrogenase (RefSeq) 0.47 Shew_1950 phosphoserine aminotransferase (RefSeq) — —
Shewanella oneidensis MR-1 0.48 SO4235 leuB 3-isopropylmalate dehydrogenase (NCBI ptt file) 0.44 SO2410 serC phosphoserine aminotransferase (NCBI ptt file) — —
Pedobacter sp. GW460-11-11-14-LB5 0.48 CA265_RS15850 3-isopropylmalate dehydrogenase 0.41 CA265_RS09005 phosphoserine transaminase — —
Shewanella sp. ANA-3 0.48 Shewana3_3760 3-isopropylmalate dehydrogenase (RefSeq) 0.44 Shewana3_1973 phosphoserine aminotransferase (RefSeq) — —
Pantoea sp. MT58 0.47 IAI47_16005 3-isopropylmalate dehydrogenase 0.51 IAI47_12865 3-phosphoserine/phosphohydroxythreonine transaminase 0.87 48
Mucilaginibacter yixingensis YX-36 DSM 26809 0.47 ABZR88_RS11605 3-isopropylmalate dehydrogenase 0.40 ABZR88_RS09230 3-phosphoserine/phosphohydroxythreonine transaminase — —
Erwinia tracheiphila SCR3 0.47 LU632_RS02875 leuB 3-isopropylmalate dehydrogenase 0.53 LU632_RS09790 serC 3-phosphoserine/phosphohydroxythreonine transaminase — —
Shewanella amazonensis SB2B 0.47 Sama_0336 3-isopropylmalate dehydrogenase (RefSeq) 0.44 Sama_1732 phosphoserine aminotransferase (RefSeq) — —
Lysobacter sp. OAE881 0.44 ABIE51_RS17585 3-isopropylmalate dehydrogenase 0.51 ABIE51_RS12150 3-phosphoserine/phosphohydroxythreonine transaminase 0.97 25
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_13595 leuB 3-isopropylmalate dehydrogenase 0.51 OKGIIK_06910 serC 3-phosphoserine/phosphohydroxythreonine transaminase low > 52
Rhodanobacter denitrificans MT42 0.41 LRK55_RS09965 3-isopropylmalate dehydrogenase 0.50 LRK55_RS00140 3-phosphoserine/phosphohydroxythreonine transaminase low > 63
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS10325 3-isopropylmalate dehydrogenase 0.50 LRK54_RS00400 3-phosphoserine/phosphohydroxythreonine transaminase 0.74 32
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS15950 3-isopropylmalate dehydrogenase 0.52 ABZR86_RS02220 3-phosphoserine/phosphohydroxythreonine transaminase 0.92 47
Parabacteroides merdae CL09T00C40 0.40 HMPREF1078_RS16640 3-isopropylmalate dehydrogenase 0.40 HMPREF1078_RS15400 3-phosphoserine/phosphohydroxythreonine transaminase 0.95 22
Phocaeicola vulgatus CL09T03C04 0.39 HMPREF1058_RS14565 3-isopropylmalate dehydrogenase 0.38 HMPREF1058_RS04300 3-phosphoserine/phosphohydroxythreonine transaminase 0.73 32
Phocaeicola dorei CL03T12C01 0.39 ABI39_RS10215 3-isopropylmalate dehydrogenase 0.38 ABI39_RS16905 3-phosphoserine/phosphohydroxythreonine transaminase 0.83 13
Bacteroides stercoris CC31F 0.39 HMPREF1181_RS14125 3-isopropylmalate dehydrogenase 0.40 HMPREF1181_RS16870 3-phosphoserine/phosphohydroxythreonine transaminase — —
Bacteroides ovatus ATCC 8483 0.39 BACOVA_04600 3-isopropylmalate dehydrogenase 0.40 BACOVA_04029 phosphoserine transaminase 0.93 34
Bacteroides thetaiotaomicron VPI-5482 0.39 BT1857 3-isopropylmalate dehydrogenase (NCBI ptt file) 0.41 BT1153 phosphoserine aminotransferase (NCBI ptt file) 0.92 4

Not shown: 21 genomes with orthologs for BPHYT_RS33900 only; 0 genomes with orthologs for BPHYT_RS14915 only