Conservation of cofitness between BPHYT_RS12840 and BPHYT_RS09500 in Burkholderia phytofirmans PsJN

75 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS12840 pyruvate dehydrogenase 1.0 BPHYT_RS09500 glucose-6-phosphate isomerase 0.71 2
Paraburkholderia graminis OAS925 0.97 ABIE53_002793 pyruvate dehydrogenase E1 component 0.91 ABIE53_002138 glucose-6-phosphate isomerase
Paraburkholderia bryophila 376MFSha3.1 0.97 H281DRAFT_00466 pyruvate dehydrogenase E1 component 0.92 H281DRAFT_00906 glucose-6-phosphate isomerase
Paraburkholderia sabiae LMG 24235 0.92 QEN71_RS05725 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.88 QEN71_RS21935 glucose-6-phosphate isomerase
Ralstonia sp. UNC404CL21Col 0.82 ABZR87_RS13470 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.54 ABZR87_RS12745 glucose-6-phosphate isomerase
Cupriavidus basilensis FW507-4G11 0.82 RR42_RS07365 pyruvate dehydrogenase 0.56 RR42_RS09060 glucose-6-phosphate isomerase low > 128
Ralstonia solanacearum IBSBF1503 0.81 RALBFv3_RS01670 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.53 RALBFv3_RS01300 glucose-6-phosphate isomerase
Ralstonia solanacearum PSI07 0.81 RPSI07_RS15815 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.54 RPSI07_RS16175 glucose-6-phosphate isomerase
Ralstonia solanacearum UW163 0.81 UW163_RS14980 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.53 UW163_RS14610 glucose-6-phosphate isomerase
Ralstonia solanacearum GMI1000 0.81 RS_RS08055 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.53 RS_RS08695 glucose-6-phosphate isomerase
Dechlorosoma suillum PS 0.74 Dsui_1578 pyruvate dehydrogenase E1 component, homodimeric type 0.48 Dsui_1239 glucose-6-phosphate isomerase
Herbaspirillum seropedicae SmR1 0.66 HSERO_RS07305 pyruvate dehydrogenase 0.51 HSERO_RS05515 glucose-6-phosphate isomerase
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_3674 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.44 Pf6N2E2_5150 Glucose-6-phosphate isomerase (EC 5.3.1.9)
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_08960 pyruvate dehydrogenase 0.44 AO356_16050 glucose-6-phosphate isomerase
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_214 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.45 PfGW456L13_1518 Glucose-6-phosphate isomerase (EC 5.3.1.9)
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_1476 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.45 Pf1N1B4_2850 Glucose-6-phosphate isomerase (EC 5.3.1.9)
Pseudomonas sp. RS175 0.64 PFR28_05061 Pyruvate dehydrogenase E1 component 0.44 PFR28_03724 Glucose-6-phosphate isomerase
Pseudomonas putida KT2440 0.64 PP_0339 Pyruvate dehydrogenase E1 component 0.45 PP_4701 glucose-6-phosphate isomerase low > 96
Pseudomonas fluorescens SBW25 0.64 PFLU_RS02275 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.45 PFLU_RS25760 glucose-6-phosphate isomerase low > 109
Pseudomonas sp. S08-1 0.64 OH686_09710 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.45 OH686_17230 Glucose-6-phosphate isomerase
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS02275 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.45 PFLU_RS25760 glucose-6-phosphate isomerase low > 109
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_12865 pyruvate dehydrogenase 0.45 AO353_14370 glucose-6-phosphate isomerase
Pseudomonas simiae WCS417 0.64 PS417_02220 pyruvate dehydrogenase 0.45 PS417_23920 glucose-6-phosphate isomerase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_0518 2-oxo-acid dehydrogenase E1 component homodimeric type 0.44 Psyr_0826 glucose-6-phosphate isomerase
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_0518 2-oxo-acid dehydrogenase E1 component homodimeric type 0.44 Psyr_0826 glucose-6-phosphate isomerase
Alteromonas macleodii MIT1002 0.63 MIT1002_03003 Pyruvate dehydrogenase E1 component 0.49 MIT1002_03081 Glucose-6-phosphate isomerase
Dyella japonica UNC79MFTsu3.2 0.63 ABZR86_RS12410 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.40 ABZR86_RS00830 glucose-6-phosphate isomerase low > 74
Castellaniella sp019104865 MT123 0.62 ABCV34_RS04160 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.33 ABCV34_RS11120 glucose-6-phosphate isomerase
Acidovorax sp. GW101-3H11 0.62 Ac3H11_4093 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.43 Ac3H11_2077 Glucose-6-phosphate isomerase (EC 5.3.1.9)
Marinobacter adhaerens HP15 0.62 HP15_3046 pyruvate dehydrogenase subunit E1 0.45 HP15_322 glucose-6-phosphate isomerase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.62 GFF4890 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.39 GFF5497 Glucose-6-phosphate isomerase (EC 5.3.1.9) low > 90
Pseudomonas stutzeri RCH2 0.62 Psest_0448 pyruvate dehydrogenase E1 component, homodimeric type 0.45 Psest_0993 Glucose-6-phosphate isomerase
Variovorax sp. SCN45 0.62 GFF967 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.42 GFF5267 Glucose-6-phosphate isomerase (EC 5.3.1.9) low > 127
Lysobacter sp. OAE881 0.61 ABIE51_RS18795 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.31 ABIE51_RS08040 glucose-6-phosphate isomerase
Dinoroseobacter shibae DFL-12 0.61 Dshi_1968 2-oxo-acid dehydrogenase E1 subunit, homodimeric type (RefSeq) 0.42 Dshi_1682 Glucose-6-phosphate isomerase (RefSeq)
Shewanella loihica PV-4 0.61 Shew_3431 aceE pyruvate dehydrogenase subunit E1 (RefSeq) 0.46 Shew_1088 pgi glucose-6-phosphate isomerase (RefSeq)
Shewanella sp. ANA-3 0.60 Shewana3_0426 aceE pyruvate dehydrogenase subunit E1 (RefSeq) 0.48 Shewana3_3148 pgi glucose-6-phosphate isomerase (RefSeq)
Xanthomonas campestris pv. campestris strain 8004 0.60 Xcc-8004.754.1 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.35 Xcc-8004.3049.1 Glucose-6-phosphate isomerase (EC 5.3.1.9)
Shewanella oneidensis MR-1 0.60 SO0424 aceE pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase (NCBI ptt file) 0.47 SO3547 pgi glucose-6-phosphate isomerase (NCBI ptt file)
Rhodanobacter sp. FW510-T8 0.59 OKGIIK_12700 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.51 OKGIIK_15520 pgi glucose-6-phosphate isomerase low > 52
Escherichia coli ECRC99 0.58 KEDOAH_17655 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.47 KEDOAH_14985 pgi glucose-6-phosphate isomerase
Escherichia coli Nissle 1917 0.58 ECOLIN_RS00640 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.47 ECOLIN_RS23240 glucose-6-phosphate isomerase low > 55
Escherichia coli ECOR27 0.58 NOLOHH_02845 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.47 NOLOHH_05335 pgi glucose-6-phosphate isomerase low > 75
Escherichia coli ECRC62 0.58 BNILDI_08765 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.47 BNILDI_06185 pgi glucose-6-phosphate isomerase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.58 OHPLBJKB_03547 Pyruvate dehydrogenase E1 component 0.47 OHPLBJKB_04021 Glucose-6-phosphate isomerase
Escherichia coli ECRC102 0.58 NIAGMN_08350 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.47 NIAGMN_10925 pgi glucose-6-phosphate isomerase
Escherichia coli BL21 0.58 ECD_00113 pyruvate dehydrogenase, decarboxylase component E1, thiamine triphosphate-binding 0.47 ECD_03897 glucosephosphate isomerase
Escherichia coli ECRC100 0.58 OKFHMN_10500 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.47 OKFHMN_13175 pgi glucose-6-phosphate isomerase
Escherichia coli ECRC98 0.58 JDDGAC_14095 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.47 JDDGAC_16800 pgi glucose-6-phosphate isomerase
Escherichia coli BW25113 0.58 b0114 aceE pyruvate dehydrogenase subunit E1 (NCBI) 0.47 b4025 pgi glucose-6-phosphate isomerase (NCBI) low > 76
Escherichia coli ECRC101 0.58 MCAODC_01015 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.47 MCAODC_03675 pgi glucose-6-phosphate isomerase
Escherichia coli ECOR38 0.58 HEPCGN_08480 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.47 HEPCGN_11685 pgi glucose-6-phosphate isomerase low > 87
Escherichia fergusonii Becca 0.58 EFB2_03931 Pyruvate dehydrogenase E1 component 0.47 EFB2_04577 Glucose-6-phosphate isomerase low > 86
Pectobacterium carotovorum WPP14 0.58 HER17_RS03290 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.47 HER17_RS02340 glucose-6-phosphate isomerase
Klebsiella michiganensis M5al 0.58 BWI76_RS04880 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.47 BWI76_RS01800 glucose-6-phosphate isomerase
Dickeya dadantii 3937 0.58 DDA3937_RS17925 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.47 DDA3937_RS19015 glucose-6-phosphate isomerase
Dickeya dianthicola 67-19 0.58 HGI48_RS17850 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.46 HGI48_RS19100 glucose-6-phosphate isomerase
Rhodanobacter denitrificans FW104-10B01 0.58 LRK54_RS11175 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.51 LRK54_RS08755 glucose-6-phosphate isomerase
Rhodanobacter denitrificans MT42 0.58 LRK55_RS10880 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.51 LRK55_RS08520 glucose-6-phosphate isomerase
Dickeya dianthicola ME23 0.58 DZA65_RS19000 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.46 DZA65_RS20220 glucose-6-phosphate isomerase
Acinetobacter radioresistens SK82 0.58 MPMX26_02925 Pyruvate dehydrogenase E1 component 0.37 MPMX26_00065 Glucose-6-phosphate isomerase low > 36
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF122 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.47 GFF1396 Glucose-6-phosphate isomerase (EC 5.3.1.9) low > 78
Pantoea sp. MT58 0.58 IAI47_15810 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.46 IAI47_17965 glucose-6-phosphate isomerase low > 76
Enterobacter sp. TBS_079 0.58 MPMX20_00807 Pyruvate dehydrogenase E1 component 0.47 MPMX20_00241 Glucose-6-phosphate isomerase low > 85
Enterobacter asburiae PDN3 0.57 EX28DRAFT_3710 pyruvate dehydrogenase E1 component, homodimeric type 0.46 EX28DRAFT_4318 Glucose-6-phosphate isomerase low > 76
Shewanella amazonensis SB2B 0.57 Sama_0375 aceE pyruvate dehydrogenase subunit E1 (RefSeq) 0.48 Sama_0912 pgi glucose-6-phosphate isomerase (RefSeq)
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_12220 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.47 CSW01_01965 glucose-6-phosphate isomerase
Erwinia tracheiphila SCR3 0.57 LU632_RS03080 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.45 LU632_RS22365 pgi glucose-6-phosphate isomerase
Rahnella sp. WP5 0.57 EX31_RS03480 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.46 EX31_RS11815 glucose-6-phosphate isomerase low > 89
Serratia liquefaciens MT49 0.57 IAI46_21325 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.47 IAI46_23090 glucose-6-phosphate isomerase low > 86
Mycobacterium tuberculosis H37Rv 0.50 Rv2241 Pyruvate dehydrogenase E1 component AceE (pyruvate decarboxylase) (pyruvate dehydrogenase) (pyruvic dehydrogenase) 0.46 Rv0946c Probable glucose-6-phosphate isomerase Pgi (GPI) (phosphoglucose isomerase) (phosphohexose isomerase) (phi)
Bosea sp. OAE506 0.09 ABIE41_RS08425 transketolase 0.43 ABIE41_RS07535 glucose-6-phosphate isomerase 0.31 69
Azospirillum sp. SherDot2 0.09 MPMX19_03172 Pyruvate dehydrogenase E1 component 0.51 MPMX19_00519 Glucose-6-phosphate isomerase
Phaeobacter inhibens DSM 17395 0.09 PGA1_c16590 transketolase-like protein 0.41 PGA1_c27980 glucose-6-phosphate isomerase Pgi
Caulobacter crescentus NA1000 Δfur 0.07 CCNA_01263 pyruvate dehydrogenase E1 component 0.37 CCNA_00222 glucose-6-phosphate isomerase/glucose-6 phosphate 1-epimerase
Caulobacter crescentus NA1000 0.07 CCNA_01263 pyruvate dehydrogenase E1 component 0.37 CCNA_00222 glucose-6-phosphate isomerase/glucose-6 phosphate 1-epimerase

Not shown: 1 genomes with orthologs for BPHYT_RS12840 only; 15 genomes with orthologs for BPHYT_RS09500 only