| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS12840 | | pyruvate dehydrogenase | 1.0 | BPHYT_RS06405 | | phosphoribosylamine--glycine ligase | 0.66 | 19 |
| Paraburkholderia graminis OAS925 | 0.97 | ABIE53_002793 | | pyruvate dehydrogenase E1 component | 0.98 | ABIE53_001545 | | phosphoribosylamine--glycine ligase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.97 | H281DRAFT_00466 | | pyruvate dehydrogenase E1 component | 0.98 | H281DRAFT_04521 | | phosphoribosylamine--glycine ligase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.92 | QEN71_RS05725 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.92 | QEN71_RS24400 | | phosphoribosylamine--glycine ligase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.82 | ABZR87_RS13470 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.78 | ABZR87_RS15410 | | phosphoribosylamine--glycine ligase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.82 | RR42_RS07365 | | pyruvate dehydrogenase | 0.74 | RR42_RS04730 | | phosphoribosylamine--glycine ligase | — | — |
| Ralstonia solanacearum PSI07 | 0.81 | RPSI07_RS15815 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.77 | RPSI07_RS13680 | | phosphoribosylamine--glycine ligase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.81 | RALBFv3_RS01670 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.76 | RALBFv3_RS03545 | | phosphoribosylamine--glycine ligase | — | — |
| Ralstonia solanacearum UW163 | 0.81 | UW163_RS14980 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.76 | UW163_RS10125 | | phosphoribosylamine--glycine ligase | — | — |
| Ralstonia solanacearum GMI1000 | 0.81 | RS_RS08055 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.78 | RS_RS10995 | | phosphoribosylamine--glycine ligase | — | — |
| Dechlorosoma suillum PS | 0.74 | Dsui_1578 | | pyruvate dehydrogenase E1 component, homodimeric type | 0.73 | Dsui_1596 | | phosphoribosylamine--glycine ligase | — | — |
| Kangiella aquimarina DSM 16071 | 0.66 | B158DRAFT_2144 | | pyruvate dehydrogenase E1 component, homodimeric type | 0.59 | B158DRAFT_0167 | | phosphoribosylamine--glycine ligase (EC 6.3.4.13) | — | — |
| Herbaspirillum seropedicae SmR1 | 0.66 | HSERO_RS07305 | | pyruvate dehydrogenase | 0.80 | HSERO_RS17755 | | phosphoribosylamine--glycine ligase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.65 | Pf6N2E2_3674 | | Pyruvate dehydrogenase E1 component (EC 1.2.4.1) | 0.59 | Pf6N2E2_3520 | | Phosphoribosylamine--glycine ligase (EC 6.3.4.13) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.64 | AO356_08960 | | pyruvate dehydrogenase | 0.58 | AO356_08230 | | phosphoribosylamine--glycine ligase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.64 | PfGW456L13_214 | | Pyruvate dehydrogenase E1 component (EC 1.2.4.1) | 0.58 | PfGW456L13_58 | | Phosphoribosylamine--glycine ligase (EC 6.3.4.13) | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.64 | Pf1N1B4_1476 | | Pyruvate dehydrogenase E1 component (EC 1.2.4.1) | 0.59 | Pf1N1B4_1316 | | Phosphoribosylamine--glycine ligase (EC 6.3.4.13) | — | — |
| Pseudomonas sp. RS175 | 0.64 | PFR28_05061 | | Pyruvate dehydrogenase E1 component | 0.59 | PFR28_05213 | | Phosphoribosylamine--glycine ligase | — | — |
| Pseudomonas putida KT2440 | 0.64 | PP_0339 | | Pyruvate dehydrogenase E1 component | 0.59 | PP_4823 | | Phosphoribosylamine--glycine ligase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.64 | PFLU_RS02275 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.58 | PFLU_RS03010 | | phosphoribosylamine--glycine ligase | — | — |
| Pseudomonas fluorescens SBW25 | 0.64 | PFLU_RS02275 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.58 | PFLU_RS03010 | | phosphoribosylamine--glycine ligase | — | — |
| Pseudomonas sp. S08-1 | 0.64 | OH686_09710 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.58 | OH686_07625 | | Phosphoribosylamine--glycine ligase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.64 | AO353_12865 | | pyruvate dehydrogenase | 0.58 | AO353_13645 | | phosphoribosylamine--glycine ligase | — | — |
| Pseudomonas simiae WCS417 | 0.64 | PS417_02220 | | pyruvate dehydrogenase | 0.57 | PS417_02935 | | phosphoribosylamine--glycine ligase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.63 | Psyr_0518 | | 2-oxo-acid dehydrogenase E1 component homodimeric type | 0.58 | Psyr_4407 | | phosphoribosylamine--glycine ligase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.63 | Psyr_0518 | | 2-oxo-acid dehydrogenase E1 component homodimeric type | 0.58 | Psyr_4407 | | phosphoribosylamine--glycine ligase | — | — |
| Alteromonas macleodii MIT1002 | 0.63 | MIT1002_03003 | | Pyruvate dehydrogenase E1 component | 0.56 | MIT1002_03961 | | Phosphoribosylamine--glycine ligase | low | > 70 |
| Dyella japonica UNC79MFTsu3.2 | 0.63 | ABZR86_RS12410 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.52 | ABZR86_RS13850 | | phosphoribosylamine--glycine ligase | low | > 74 |
| Castellaniella sp019104865 MT123 | 0.62 | ABCV34_RS04160 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.68 | ABCV34_RS02550 | | phosphoribosylamine--glycine ligase | — | — |
| Marinobacter adhaerens HP15 | 0.62 | HP15_3046 | | pyruvate dehydrogenase subunit E1 | 0.58 | HP15_3228 | | phosphoribosylamine-glycine ligase | — | — |
| Acidovorax sp. GW101-3H11 | 0.62 | Ac3H11_4093 | | Pyruvate dehydrogenase E1 component (EC 1.2.4.1) | 0.68 | Ac3H11_2421 | | Phosphoribosylamine--glycine ligase (EC 6.3.4.13) | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.62 | GFF4890 | | Pyruvate dehydrogenase E1 component (EC 1.2.4.1) | 0.66 | GFF4524 | | Phosphoribosylamine--glycine ligase (EC 6.3.4.13) | — | — |
| Pseudomonas stutzeri RCH2 | 0.62 | Psest_0448 | | pyruvate dehydrogenase E1 component, homodimeric type | 0.58 | Psest_1013 | | phosphoribosylamine--glycine ligase | — | — |
| Variovorax sp. SCN45 | 0.62 | GFF967 | | Pyruvate dehydrogenase E1 component (EC 1.2.4.1) | 0.72 | GFF302 | | Phosphoribosylamine--glycine ligase (EC 6.3.4.13) | low | > 127 |
| Lysobacter sp. OAE881 | 0.61 | ABIE51_RS18795 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.57 | ABIE51_RS17770 | | phosphoribosylamine--glycine ligase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.61 | Dshi_1968 | | 2-oxo-acid dehydrogenase E1 subunit, homodimeric type (RefSeq) | 0.42 | Dshi_2728 | | phosphoribosylamine--glycine ligase (RefSeq) | low | > 64 |
| Shewanella loihica PV-4 | 0.61 | Shew_3431 | aceE | pyruvate dehydrogenase subunit E1 (RefSeq) | 0.53 | Shew_3413 | | phosphoribosylamine--glycine ligase (RefSeq) | 0.60 | 31 |
| Shewanella sp. ANA-3 | 0.60 | Shewana3_0426 | aceE | pyruvate dehydrogenase subunit E1 (RefSeq) | 0.55 | Shewana3_0440 | | phosphoribosylamine--glycine ligase (RefSeq) | 0.54 | 66 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.60 | Xcc-8004.754.1 | | Pyruvate dehydrogenase E1 component (EC 1.2.4.1) | 0.58 | Xcc-8004.657.1 | | Phosphoribosylamine--glycine ligase (EC 6.3.4.13) | — | — |
| Shewanella oneidensis MR-1 | 0.60 | SO0424 | aceE | pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase (NCBI ptt file) | 0.54 | SO0441 | purD | phosphoribosylamine--glycine ligase (NCBI ptt file) | 0.51 | 70 |
| Rhodanobacter sp. FW510-T8 | 0.59 | OKGIIK_12700 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.51 | OKGIIK_13750 | purD | phosphoribosylamine--glycine ligase | 0.64 | 19 |
| Escherichia coli ECOR27 | 0.58 | NOLOHH_02845 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.59 | NOLOHH_05460 | purD | Phosphoribosylamine--glycine ligase | 0.96 | 3 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.58 | OHPLBJKB_03547 | | Pyruvate dehydrogenase E1 component | 0.60 | OHPLBJKB_04044 | | Phosphoribosylamine--glycine ligase | — | — |
| Escherichia coli ECRC100 | 0.58 | OKFHMN_10500 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.59 | OKFHMN_13315 | purD | Phosphoribosylamine--glycine ligase | — | — |
| Escherichia coli BL21 | 0.58 | ECD_00113 | | pyruvate dehydrogenase, decarboxylase component E1, thiamine triphosphate-binding | 0.60 | ECD_03882 | | phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase | — | — |
| Escherichia coli ECRC99 | 0.58 | KEDOAH_17655 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.59 | KEDOAH_14845 | purD | Phosphoribosylamine--glycine ligase | — | — |
| Escherichia coli ECRC98 | 0.58 | JDDGAC_14095 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.59 | JDDGAC_16940 | purD | Phosphoribosylamine--glycine ligase | — | — |
| Escherichia coli Nissle 1917 | 0.58 | ECOLIN_RS00640 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.60 | ECOLIN_RS23095 | | phosphoribosylamine--glycine ligase | low | > 55 |
| Escherichia coli ECRC101 | 0.58 | MCAODC_01015 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.59 | MCAODC_03815 | purD | Phosphoribosylamine--glycine ligase | — | — |
| Escherichia coli ECRC102 | 0.58 | NIAGMN_08350 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.59 | NIAGMN_11065 | purD | Phosphoribosylamine--glycine ligase | — | — |
| Escherichia coli ECRC62 | 0.58 | BNILDI_08765 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.59 | BNILDI_06060 | purD | Phosphoribosylamine--glycine ligase | 0.67 | 50 |
| Escherichia coli BW25113 | 0.58 | b0114 | aceE | pyruvate dehydrogenase subunit E1 (NCBI) | 0.59 | b4005 | purD | phosphoribosylamine--glycine ligase (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.58 | HEPCGN_08480 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.59 | HEPCGN_11955 | purD | Phosphoribosylamine--glycine ligase | low | > 87 |
| Escherichia fergusonii Becca | 0.58 | EFB2_03931 | | Pyruvate dehydrogenase E1 component | 0.60 | EFB2_04605 | | Phosphoribosylamine--glycine ligase | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.58 | HER17_RS03290 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.57 | HER17_RS20340 | | phosphoribosylamine--glycine ligase | — | — |
| Klebsiella michiganensis M5al | 0.58 | BWI76_RS04880 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.59 | BWI76_RS01610 | | phosphoribosylamine--glycine ligase | — | — |
| Dickeya dadantii 3937 | 0.58 | DDA3937_RS17925 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.58 | DDA3937_RS01215 | | phosphoribosylamine--glycine ligase | — | — |
| Dickeya dianthicola ME23 | 0.58 | DZA65_RS19000 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.57 | DZA65_RS01255 | | phosphoribosylamine--glycine ligase | — | — |
| Rhodanobacter denitrificans MT42 | 0.58 | LRK55_RS10880 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.51 | LRK55_RS09805 | | phosphoribosylamine--glycine ligase | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.58 | LRK54_RS11175 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.51 | LRK54_RS10165 | | phosphoribosylamine--glycine ligase | low | > 59 |
| Dickeya dianthicola 67-19 | 0.58 | HGI48_RS17850 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.57 | HGI48_RS01210 | | phosphoribosylamine--glycine ligase | — | — |
| Acinetobacter radioresistens SK82 | 0.58 | MPMX26_02925 | | Pyruvate dehydrogenase E1 component | 0.58 | MPMX26_01140 | | Phosphoribosylamine--glycine ligase | 0.64 | 31 |
| Pantoea sp. MT58 | 0.58 | IAI47_15810 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.59 | IAI47_18045 | | phosphoribosylamine--glycine ligase | 0.60 | 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.58 | GFF122 | | Pyruvate dehydrogenase E1 component (EC 1.2.4.1) | 0.59 | GFF4187 | | Phosphoribosylamine--glycine ligase (EC 6.3.4.13) | low | > 78 |
| Enterobacter sp. TBS_079 | 0.58 | MPMX20_00807 | | Pyruvate dehydrogenase E1 component | 0.58 | MPMX20_00225 | | Phosphoribosylamine--glycine ligase | 0.40 | 84 |
| Enterobacter asburiae PDN3 | 0.57 | EX28DRAFT_3710 | | pyruvate dehydrogenase E1 component, homodimeric type | 0.58 | EX28DRAFT_4544 | | phosphoribosylamine--glycine ligase (EC 6.3.4.13) | low | > 76 |
| Shewanella amazonensis SB2B | 0.57 | Sama_0375 | aceE | pyruvate dehydrogenase subunit E1 (RefSeq) | 0.56 | Sama_0394 | | phosphoribosylamine--glycine ligase (RefSeq) | low | > 62 |
| Vibrio cholerae E7946 ATCC 55056 | 0.57 | CSW01_12220 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.58 | CSW01_01415 | | phosphoribosylamine--glycine ligase | — | — |
| Erwinia tracheiphila SCR3 | 0.57 | LU632_RS03080 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.58 | LU632_RS01015 | purD | phosphoribosylamine--glycine ligase | — | — |
| Rahnella sp. WP5 | 0.57 | EX31_RS03480 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.57 | EX31_RS16855 | | phosphoribosylamine--glycine ligase | low | > 89 |
| Serratia liquefaciens MT49 | 0.57 | IAI46_21325 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.56 | IAI46_01360 | | phosphoribosylamine--glycine ligase | low | > 86 |
| Mycobacterium tuberculosis H37Rv | 0.50 | Rv2241 | | Pyruvate dehydrogenase E1 component AceE (pyruvate decarboxylase) (pyruvate dehydrogenase) (pyruvic dehydrogenase) | 0.32 | Rv0772 | | Probable phosphoribosylamine--glycine ligase PurD (GARS) (glycinamide ribonucleotide synthetase) (phosphoribosylglycinamide synthetase) (5'-phosphoribosylglycinamide synthetase) | — | — |
| Bosea sp. OAE506 | 0.09 | ABIE41_RS08425 | | transketolase | 0.47 | ABIE41_RS23160 | | phosphoribosylamine--glycine ligase | 0.30 | 74 |
| Azospirillum sp. SherDot2 | 0.09 | MPMX19_03172 | | Pyruvate dehydrogenase E1 component | 0.47 | MPMX19_01630 | | Phosphoribosylamine--glycine ligase | low | > 112 |
| Phaeobacter inhibens DSM 17395 | 0.09 | PGA1_c16590 | | transketolase-like protein | 0.43 | PGA1_c23610 | | phosphoribosylamine--glycine ligase PurD | low | > 62 |
| Caulobacter crescentus NA1000 Δfur | 0.07 | CCNA_01263 | | pyruvate dehydrogenase E1 component | 0.42 | CCNA_00299 | | phosphoribosylamine--glycine ligase | low | > 67 |
| Caulobacter crescentus NA1000 | 0.07 | CCNA_01263 | | pyruvate dehydrogenase E1 component | 0.42 | CCNA_00299 | | phosphoribosylamine--glycine ligase | low | > 66 |
Not shown: 0 genomes with orthologs for BPHYT_RS12840 only; 27 genomes with orthologs for BPHYT_RS06405 only