Conservation of cofitness between B158DRAFT_0588 and B158DRAFT_1989 in Kangiella aquimarina DSM 16071

79 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Kangiella aquimarina DSM 16071 1.0 B158DRAFT_0588 ribonuclease PH 1.0 B158DRAFT_1989 ribonuclease R 0.61 15
Alteromonas macleodii MIT1002 0.77 MIT1002_04071 Ribonuclease PH 0.45 MIT1002_03606 Ribonuclease R low > 70
Shewanella loihica PV-4 0.76 Shew_3488 ribonuclease PH (RefSeq) 0.49 Shew_3289 ribonuclease R (RefSeq) low > 60
Shewanella sp. ANA-3 0.74 Shewana3_3777 RNAse PH (RefSeq) 0.49 Shewana3_0697 RNAse R (RefSeq) low > 73
Pseudomonas sp. S08-1 0.74 OH686_13570 ribonuclease PH 0.48 OH686_15910 ribonuclease R low > 80
Shewanella amazonensis SB2B 0.74 Sama_0320 tRNA nucleotidyltransferase (RefSeq) 0.47 Sama_3067 exoribonuclease II (RefSeq) low > 62
Shewanella oneidensis MR-1 0.74 SO4256 rph ribonuclease PH (NCBI ptt file) 0.48 SO3935 vacB ribonuclease R (NCBI ptt file) low > 76
Dickeya dadantii 3937 0.71 DDA3937_RS20540 ribonuclease PH 0.50 DDA3937_RS17260 ribonuclease R low > 74
Dickeya dianthicola 67-19 0.71 HGI48_RS00675 ribonuclease PH 0.49 HGI48_RS17315 ribonuclease R low > 71
Dickeya dianthicola ME23 0.71 DZA65_RS00730 ribonuclease PH 0.49 DZA65_RS18405 ribonuclease R low > 75
Pseudomonas stutzeri RCH2 0.71 Psest_3813 ribonuclease PH 0.47 Psest_0691 ribonuclease R low > 67
Pseudomonas sp. RS175 0.71 PFR28_04420 Ribonuclease PH 0.48 PFR28_05130 Ribonuclease R low > 88
Pseudomonas fluorescens FW300-N2E2 0.70 Pf6N2E2_4365 Ribonuclease PH (EC 2.7.7.56) 0.48 Pf6N2E2_3607 3'-to-5' exoribonuclease RNase R low > 103
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_09260 ribonuclease PH 0.48 AO353_13200 exoribonuclease R low > 101
Pseudomonas fluorescens FW300-N2C3 0.70 AO356_12500 ribonuclease PH 0.48 AO356_08610 exoribonuclease R low > 104
Pseudomonas fluorescens GW456-L13 0.70 PfGW456L13_784 Ribonuclease PH (EC 2.7.7.56) 0.48 PfGW456L13_144 3'-to-5' exoribonuclease RNase R low > 87
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_0213 RNAse PH 0.47 Psyr_0579 RNAse R low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_0213 RNAse PH 0.47 Psyr_0579 RNAse R low > 86
Pseudomonas putida KT2440 0.70 PP_5294 Ribonuclease PH 0.48 PP_4880 exoribonuclease R 0.44 1
Pseudomonas fluorescens FW300-N1B4 0.70 Pf1N1B4_2117 Ribonuclease PH (EC 2.7.7.56) 0.48 Pf1N1B4_1403 3'-to-5' exoribonuclease RNase R low > 87
Pseudomonas simiae WCS417 0.69 PS417_27810 ribonuclease PH 0.48 PS417_02555 exoribonuclease R low > 88
Pseudomonas fluorescens SBW25 0.69 PFLU_RS29490 ribonuclease PH 0.47 PFLU_RS02625 ribonuclease R low > 109
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS29490 ribonuclease PH 0.47 PFLU_RS02625 ribonuclease R low > 109
Marinobacter adhaerens HP15 0.68 HP15_300 ribonuclease PH 0.44 HP15_622 exoribonuclease R low > 73
Pantoea sp. MT58 0.68 IAI47_00595 ribonuclease PH 0.49 IAI47_02625 ribonuclease R low > 76
Xanthomonas campestris pv. campestris strain 8004 0.68 Xcc-8004.1221.1 Ribonuclease PH (EC 2.7.7.56) 0.40 Xcc-8004.3370.1 3'-to-5' exoribonuclease RNase R low > 74
Serratia liquefaciens MT49 0.68 IAI46_24850 ribonuclease PH 0.47 IAI46_01660 ribonuclease R low > 86
Rahnella sp. WP5 0.68 EX31_RS14505 ribonuclease PH 0.48 EX31_RS08785 ribonuclease R low > 89
Escherichia coli ECRC98 0.67 JDDGAC_19215 rph ribonuclease PH 0.51 JDDGAC_15860 rnr ribonuclease R 0.82 38
Escherichia fergusonii Becca 0.67 EFB2_00170 Ribonuclease PH 0.51 EFB2_04356 Ribonuclease R low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_00059 Ribonuclease PH 0.51 OHPLBJKB_03863 Ribonuclease R low > 73
Escherichia coli ECRC101 0.67 MCAODC_06100 rph ribonuclease PH 0.51 MCAODC_02735 rnr ribonuclease R low > 87
Escherichia coli ECOR27 0.67 NOLOHH_07470 rph ribonuclease PH 0.51 NOLOHH_04485 rnr ribonuclease R low > 75
Escherichia coli ECRC102 0.67 NIAGMN_13350 rph ribonuclease PH 0.51 NIAGMN_10070 rnr ribonuclease R — —
Escherichia coli ECRC100 0.67 OKFHMN_15590 rph ribonuclease PH 0.51 OKFHMN_12220 rnr ribonuclease R low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF366 Ribonuclease PH (EC 2.7.7.56) 0.51 GFF832 '3'-to-5' exoribonuclease RNase R' transl_table=11 low > 78
Escherichia coli Nissle 1917 0.67 ECOLIN_RS20755 ribonuclease PH 0.50 ECOLIN_RS24265 ribonuclease R 0.37 34
Escherichia coli ECRC99 0.67 KEDOAH_12555 rph ribonuclease PH 0.51 KEDOAH_15935 rnr ribonuclease R — —
Escherichia coli BL21 0.67 ECD_03500 ribonuclease PH 0.51 ECD_04046 exoribonuclease R, RNase R low > 61
Escherichia coli ECOR38 0.67 HEPCGN_14410 rph ribonuclease PH 0.50 HEPCGN_10450 rnr ribonuclease R 0.87 1
Escherichia coli ECRC62 0.67 BNILDI_04045 rph ribonuclease PH 0.51 BNILDI_07005 rnr ribonuclease R low > 75
Klebsiella michiganensis M5al 0.67 BWI76_RS27390 ribonuclease PH 0.50 BWI76_RS02575 exoribonuclease R low > 92
Pectobacterium carotovorum WPP14 0.67 HER17_RS20855 ribonuclease PH 0.49 HER17_RS03835 ribonuclease R low > 75
Enterobacter sp. TBS_079 0.67 MPMX20_00092 Ribonuclease PH 0.50 MPMX20_00460 Ribonuclease R low > 85
Enterobacter asburiae PDN3 0.66 EX28DRAFT_3893 ribonuclease PH 0.50 EX28DRAFT_3376 ribonuclease R low > 76
Erwinia tracheiphila SCR3 0.66 LU632_RS22020 rph ribonuclease PH 0.49 LU632_RS21750 rnr ribonuclease R low > 74
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_01115 ribonuclease PH 0.48 CSW01_13155 ribonuclease R low > 62
Escherichia coli BW25113 0.66 b3643 rph ribonuclease PH (NCBI) 0.51 b4179 vacB putative enzyme (VIMSS) low > 76
Herbaspirillum seropedicae SmR1 0.66 HSERO_RS10655 ribonuclease PH 0.42 HSERO_RS09290 ribonuclease R 0.36 2
Ralstonia solanacearum PSI07 0.65 RPSI07_RS13840 ribonuclease PH 0.45 RPSI07_RS18030 ribonuclease R — —
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS03645 ribonuclease PH 0.42 QEN71_RS22925 ribonuclease R low > 153
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS15255 ribonuclease PH 0.44 ABZR87_RS10985 ribonuclease R 0.53 37
Ralstonia solanacearum GMI1000 0.65 RS_RS10830 ribonuclease PH 0.45 RS_RS06155 ribonuclease R — —
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS15325 ribonuclease PH 0.42 BPHYT_RS08455 ribonuclease R 0.49 21
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS11900 ribonuclease PH 0.39 ABZR86_RS08270 ribonuclease R low > 74
Dechlorosoma suillum PS 0.64 Dsui_0494 ribonuclease PH 0.47 Dsui_3128 ribonuclease R low > 51
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS03345 ribonuclease PH 0.45 RALBFv3_RS15345 ribonuclease R 0.52 66
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_04008 RNAse PH 0.42 H281DRAFT_00712 RNAse R low > 103
Ralstonia solanacearum UW163 0.64 UW163_RS10375 ribonuclease PH 0.45 UW163_RS12810 ribonuclease R — —
Paraburkholderia graminis OAS925 0.63 ABIE53_003234 ribonuclease PH 0.42 ABIE53_001940 ribonuclease R low > 113
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS04890 ribonuclease PH 0.44 RR42_RS13065 ribonuclease R 0.46 2
Lysobacter sp. OAE881 0.63 ABIE51_RS17285 ribonuclease PH 0.41 ABIE51_RS07475 ribonuclease R low > 62
Acinetobacter radioresistens SK82 0.62 MPMX26_00040 Ribonuclease PH 0.37 MPMX26_02684 Ribonuclease R 0.63 32
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF3254 Ribonuclease PH (EC 2.7.7.56) 0.37 GFF4921 3'-to-5' exoribonuclease RNase R low > 90
Variovorax sp. OAS795 0.61 ABID97_RS23640 ribonuclease PH 0.38 ABID97_RS17200 ribonuclease R low > 91
Rhizobium sp. OAE497 0.61 ABIE40_RS01640 ribonuclease PH 0.22 ABIE40_RS07350 ribonuclease R low > 107
Variovorax sp. SCN45 0.61 GFF2381 Ribonuclease PH (EC 2.7.7.56) 0.38 GFF399 3'-to-5' exoribonuclease RNase R low > 127
Sinorhizobium meliloti 1021 0.60 SMc01144 ribonuclease PH 0.22 SMc01365 exoribonuclease II protein low > 103
Rhodanobacter denitrificans MT42 0.60 LRK55_RS11470 ribonuclease PH 0.40 LRK55_RS00235 ribonuclease R low > 63
Rhodanobacter denitrificans FW104-10B01 0.60 LRK54_RS11745 ribonuclease PH 0.40 LRK54_RS00495 ribonuclease R low > 59
Rhodanobacter sp. FW510-T8 0.60 OKGIIK_12150 rph ribonuclease PH 0.41 OKGIIK_06755 rnr ribonuclease R — —
Castellaniella sp019104865 MT123 0.59 ABCV34_RS03515 ribonuclease PH 0.40 ABCV34_RS06625 ribonuclease R low > 48
Azospirillum sp. SherDot2 0.59 MPMX19_02576 Ribonuclease PH 0.22 MPMX19_01812 Ribonuclease R low > 112
Rhodopseudomonas palustris CGA009 0.58 TX73_001710 ribonuclease PH 0.22 TX73_016160 ribonuclease R low > 86
Magnetospirillum magneticum AMB-1 0.57 AMB_RS22760 ribonuclease PH 0.23 AMB_RS04465 ribonuclease R low > 64
Rhodospirillum rubrum S1H 0.56 Rru_A3641 Ribonuclease PH (NCBI) 0.23 Rru_A3203 ribonuclease R (NCBI) low > 58
Brevundimonas sp. GW460-12-10-14-LB2 0.55 A4249_RS13125 ribonuclease PH 0.22 A4249_RS08325 ribonuclease R low > 48
Caulobacter crescentus NA1000 Δfur 0.54 CCNA_00151 ribonuclease PH 0.21 CCNA_02537 ribonuclease R low > 67
Caulobacter crescentus NA1000 0.54 CCNA_00151 ribonuclease PH 0.21 CCNA_02537 ribonuclease R low > 66
Synechococcus elongatus PCC 7942 0.48 Synpcc7942_1073 rph ribonuclease PH 0.13 Synpcc7942_1911 zam Cold shock protein low > 38

Not shown: 9 genomes with orthologs for B158DRAFT_0588 only; 11 genomes with orthologs for B158DRAFT_1989 only