| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Kangiella aquimarina DSM 16071 | 1.0 | B158DRAFT_0373 | | tRNA modification GTPase TrmE | 1.0 | B158DRAFT_0122 | | NADH-quinone oxidoreductase, F subunit | 0.86 | 12 |
| Escherichia fergusonii Becca | 0.66 | EFB2_04925 | | tRNA modification GTPase MnmE | 0.41 | EFB2_01575 | | NADH-quinone oxidoreductase subunit F | low | > 86 |
| Escherichia coli Nissle 1917 | 0.66 | ECOLIN_RS21345 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.41 | ECOLIN_RS13265 | | NADH-quinone oxidoreductase subunit NuoF | low | > 55 |
| Escherichia coli ECRC100 | 0.65 | OKFHMN_14985 | | tRNA modification GTPase MnmE | 0.41 | OKFHMN_22860 | nuoF | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Escherichia coli ECRC102 | 0.65 | NIAGMN_12740 | | tRNA modification GTPase MnmE | 0.41 | NIAGMN_20630 | nuoF | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Escherichia coli ECRC99 | 0.65 | KEDOAH_13165 | | tRNA modification GTPase MnmE | 0.41 | KEDOAH_05335 | nuoF | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Escherichia coli ECRC62 | 0.65 | BNILDI_04405 | | tRNA modification GTPase MnmE | 0.41 | BNILDI_13400 | nuoF | NADH-quinone oxidoreductase subunit NuoF | low | > 75 |
| Escherichia coli ECRC98 | 0.65 | JDDGAC_18605 | | tRNA modification GTPase MnmE | 0.41 | JDDGAC_26825 | nuoF | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Escherichia coli ECRC101 | 0.65 | MCAODC_05495 | | tRNA modification GTPase MnmE | 0.41 | MCAODC_13900 | nuoF | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Escherichia coli ECOR38 | 0.65 | HEPCGN_13680 | | tRNA modification GTPase MnmE | 0.41 | HEPCGN_22065 | nuoF | NADH-quinone oxidoreductase subunit NuoF | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.65 | OHPLBJKB_04346 | | tRNA modification GTPase MnmE | 0.41 | OHPLBJKB_01422 | | NADH-quinone oxidoreductase subunit F | — | — |
| Escherichia coli BL21 | 0.65 | ECD_03590 | | tRNA U34 5-methylaminomethyl-2-thiouridine modification GTPase | 0.41 | ECD_02209 | | NADH:ubiquinone oxidoreductase, chain F | low | > 61 |
| Escherichia coli BW25113 | 0.65 | b3706 | trmE | tRNA modification GTPase (NCBI) | 0.41 | b2284 | nuoF | NADH:ubiquinone oxidoreductase, chain F (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 0.65 | NOLOHH_07125 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.41 | NOLOHH_14480 | nuoF | NADH-quinone oxidoreductase subunit NuoF | low | > 75 |
| Serratia liquefaciens MT49 | 0.65 | IAI46_25250 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.41 | IAI46_17690 | | NADH-quinone oxidoreductase subunit NuoF | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.65 | HER17_RS21825 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.40 | HER17_RS07145 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Enterobacter sp. TBS_079 | 0.65 | MPMX20_04650 | | tRNA modification GTPase MnmE | 0.41 | MPMX20_03214 | | NADH-quinone oxidoreductase subunit F | low | > 85 |
| Klebsiella michiganensis M5al | 0.65 | BWI76_RS00050 | | tRNA modification GTPase | 0.41 | BWI76_RS20170 | | NADH-quinone oxidoreductase subunit F | — | — |
| Enterobacter asburiae PDN3 | 0.65 | EX28DRAFT_3993 | | tRNA modification GTPase TrmE | 0.41 | EX28DRAFT_0325 | | NADH-quinone oxidoreductase, F subunit | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.65 | GFF1750 | | GTPase and tRNA-U34 5-formylation enzyme TrmE | 0.41 | GFF1887 | | NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) | low | > 78 |
| Dickeya dianthicola 67-19 | 0.64 | HGI48_RS21710 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.38 | HGI48_RS14290 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Dickeya dianthicola ME23 | 0.64 | DZA65_RS22695 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.38 | DZA65_RS14965 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Rahnella sp. WP5 | 0.64 | EX31_RS06000 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.40 | EX31_RS19415 | | NADH-quinone oxidoreductase subunit NuoF | low | > 89 |
| Dickeya dadantii 3937 | 0.64 | DDA3937_RS21310 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.38 | DDA3937_RS14315 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Shewanella oneidensis MR-1 | 0.64 | SO0003 | trmE | tRNA modification GTPase TrmE (NCBI ptt file) | 0.38 | SO1017 | nuoF | NADH dehydrogenase I, F subunit (NCBI ptt file) | 0.32 | 46 |
| Erwinia tracheiphila SCR3 | 0.63 | LU632_RS25300 | mnmE | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.39 | LU632_RS07985 | nuoF | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Pantoea sp. MT58 | 0.63 | IAI47_18830 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.40 | IAI47_06380 | | NADH-quinone oxidoreductase subunit NuoF | low | > 76 |
| Marinobacter adhaerens HP15 | 0.60 | HP15_3698 | | tRNA modification GTPase TrmE | 0.36 | HP15_4173 | | NADH dehydrogenase (quinone) | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.60 | PfGW456L13_670 | | GTPase and tRNA-U34 5-formylation enzyme TrmE | 0.38 | PfGW456L13_2629 | | NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.60 | AO353_10455 | | tRNA modification GTPase MnmE | 0.38 | AO353_27760 | | NADH dehydrogenase | — | — |
| Pseudomonas sp. RS175 | 0.59 | PFR28_04588 | | tRNA modification GTPase MnmE | 0.37 | PFR28_02631 | | NADH-quinone oxidoreductase subunit F | — | — |
| Pseudomonas fluorescens SBW25 | 0.59 | PFLU_RS30195 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.38 | PFLU_RS18635 | | NADH-quinone oxidoreductase subunit NuoF | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.59 | Pf1N1B4_1933 | | GTPase and tRNA-U34 5-formylation enzyme TrmE | 0.38 | Pf1N1B4_4037 | | NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.59 | AO356_11660 | | tRNA modification GTPase MnmE | 0.37 | AO356_22050 | | NADH dehydrogenase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.59 | PFLU_RS30195 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.38 | PFLU_RS18635 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Pseudomonas putida KT2440 | 0.59 | PP_0005 | | GTPase | 0.39 | PP_4123 | | NADH-quinone oxidoreductase subunit F | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.59 | Pf6N2E2_4202 | | GTPase and tRNA-U34 5-formylation enzyme TrmE | 0.37 | Pf6N2E2_273 | | NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) | — | — |
| Pseudomonas simiae WCS417 | 0.59 | PS417_28540 | | tRNA modification GTPase MnmE | 0.38 | PS417_16595 | | NADH dehydrogenase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.59 | Psyr_5133 | | tRNA modification GTPase trmE | 0.39 | Psyr_3201 | | NADH dehydrogenase subunit F | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.59 | Psyr_5133 | | tRNA modification GTPase trmE | 0.39 | Psyr_3201 | | NADH dehydrogenase subunit F | — | — |
| Pseudomonas sp. S08-1 | 0.58 | OH686_12655 | | tRNA modification GTPase TrmE | 0.37 | OH686_00135 | | NADH oxidoreductase (quinone), F subunit | — | — |
| Acinetobacter radioresistens SK82 | 0.52 | MPMX26_03070 | | tRNA modification GTPase MnmE | 0.42 | MPMX26_02551 | | NADH-quinone oxidoreductase subunit F | — | — |
| Acidovorax sp. GW101-3H11 | 0.50 | Ac3H11_4264 | | GTPase and tRNA-U34 5-formylation enzyme TrmE | 0.64 | Ac3H11_1447 | | NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.49 | GFF2437 | | GTPase and tRNA-U34 5-formylation enzyme TrmE | 0.63 | GFF3686 | | NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) | — | — |
| Dechlorosoma suillum PS | 0.48 | Dsui_0837 | | tRNA modification GTPase TrmE | 0.67 | Dsui_3045 | | NADH-quinone oxidoreductase, F subunit | — | — |
| Variovorax sp. OAS795 | 0.47 | ABID97_RS02655 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.64 | ABID97_RS20470 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Burkholderia phytofirmans PsJN | 0.47 | BPHYT_RS19830 | | tRNA modification GTPase TrmE | 0.67 | BPHYT_RS06650 | | NADH dehydrogenase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.47 | RR42_RS20805 | | tRNA modification GTPase TrmE | 0.65 | RR42_RS05535 | | NADH dehydrogenase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.47 | QEN71_RS29655 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.66 | QEN71_RS24125 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Variovorax sp. SCN45 | 0.47 | GFF3275 | | tRNA-5-carboxymethylaminomethyl-2-thiouridine(34) synthesis protein MnmE | 0.65 | GFF4755 | | NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) | — | — |
| Paraburkholderia graminis OAS925 | 0.46 | ABIE53_000332 | | tRNA modification GTPase | 0.67 | ABIE53_001595 | | NADH-quinone oxidoreductase subunit F | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.46 | H281DRAFT_02320 | | tRNA modification GTPase trmE | 0.67 | H281DRAFT_04572 | | NADH dehydrogenase subunit F | — | — |
| Ralstonia sp. UNC404CL21Col | 0.46 | ABZR87_RS05350 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.66 | ABZR87_RS14855 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Ralstonia solanacearum PSI07 | 0.46 | RPSI07_RS23950 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.64 | RPSI07_RS14360 | | NADH-quinone oxidoreductase subunit F | — | — |
| Ralstonia solanacearum GMI1000 | 0.46 | RS_RS00020 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.66 | RS_RS10320 | | NADH-quinone oxidoreductase subunit F | — | — |
| Ralstonia solanacearum UW163 | 0.46 | UW163_RS04170 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.66 | UW163_RS10775 | | NADH-quinone oxidoreductase subunit F | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.46 | RALBFv3_RS09410 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.66 | RALBFv3_RS02950 | | NADH-quinone oxidoreductase subunit F | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.46 | ABZR86_RS15115 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.60 | ABZR86_RS06090 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.45 | LRK54_RS08505 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.66 | LRK54_RS01105 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Rhodanobacter denitrificans MT42 | 0.45 | LRK55_RS08270 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.66 | LRK55_RS00880 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Herbaspirillum seropedicae SmR1 | 0.44 | HSERO_RS21670 | | tRNA modification GTPase TrmE | 0.66 | HSERO_RS08845 | | NADH dehydrogenase | — | — |
| Castellaniella sp019104865 MT123 | 0.44 | ABCV34_RS11895 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.66 | ABCV34_RS08725 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Rhodanobacter sp. FW510-T8 | 0.44 | OKGIIK_15285 | mnmE | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.66 | OKGIIK_05790 | nuoF | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.40 | Xcc-8004.5407.1 | | GTPase and tRNA-U34 5-formylation enzyme TrmE | 0.60 | Xcc-8004.1988.1 | | NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) | — | — |
| Lysobacter sp. OAE881 | 0.39 | ABIE51_RS00735 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.67 | ABIE51_RS08335 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.33 | ABZR88_RS02725 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.46 | ABZR88_RS17145 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.32 | CA265_RS10450 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.46 | CA265_RS23555 | | NADH-quinone oxidoreductase subunit F | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.32 | CA264_06625 | | tRNA modification GTPase | 0.47 | CA264_14225 | | NADH oxidoreductase (quinone) subunit F | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.30 | A4249_RS13700 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.46 | A4249_RS06390 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Dinoroseobacter shibae DFL-12 | 0.29 | Dshi_3454 | | tRNA modification GTPase TrmE (RefSeq) | 0.48 | Dshi_1316 | | NADH-quinone oxidoreductase, F subunit (RefSeq) | — | — |
| Bosea sp. OAE506 | 0.27 | ABIE41_RS04680 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.48 | ABIE41_RS17925 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Azospirillum brasilense Sp245 | 0.27 | AZOBR_RS01805 | | tRNA modification GTPase TrmE | 0.49 | AZOBR_RS07190 | | NADH dehydrogenase | — | — |
| Sinorhizobium meliloti 1021 | 0.27 | SMc02797 | | tRNA modification GTPase TrmE | 0.50 | SMa1525 | | NuoF2 NADH I chain F | — | — |
| Magnetospirillum magneticum AMB-1 | 0.27 | AMB_RS00005 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.49 | AMB_RS13985 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.26 | CCNA_03872 | | tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase | 0.47 | CCNA_02024 | | NADH-quinone oxidoreductase chain F | — | — |
| Caulobacter crescentus NA1000 | 0.26 | CCNA_03872 | | tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase | 0.47 | CCNA_02024 | | NADH-quinone oxidoreductase chain F | — | — |
| Agrobacterium fabrum C58 | 0.26 | Atu2832 | | tRNA modification GTPase | 0.48 | Atu1275 | | NADH ubiquinone oxidoreductase chain F | — | — |
| Azospirillum sp. SherDot2 | 0.25 | MPMX19_02568 | | tRNA modification GTPase MnmE | 0.49 | MPMX19_01741 | | NADH-quinone oxidoreductase subunit F | — | — |
| Rhodopseudomonas palustris CGA009 | 0.25 | TX73_001535 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.47 | TX73_015260 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Rhizobium sp. OAE497 | 0.25 | ABIE40_RS19220 | | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | 0.48 | ABIE40_RS07205 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Phaeobacter inhibens DSM 17395 | 0.24 | PGA1_c35110 | | tRNA modification GTPase MnmE | 0.47 | PGA1_c10430 | | NADH-quinone oxidoreductase subunit F | — | — |
| Rhodospirillum rubrum S1H | 0.24 | Rru_A3624 | | tRNA modification GTPase TrmE (NCBI) | 0.50 | Rru_A1560 | | NADH-quinone oxidoreductase, F subunit (NCBI) | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.20 | Ga0059261_2204 | | tRNA modification GTPase trmE | 0.50 | Ga0059261_0704 | | NADH-quinone oxidoreductase, F subunit | — | — |
Not shown: 17 genomes with orthologs for B158DRAFT_0373 only; 1 genomes with orthologs for B158DRAFT_0122 only