| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Agrobacterium fabrum C58 | 1.0 | Atu1456 | | sulfite reductase (NADPH) hemoprotein beta-component | 1.0 | Atu2747 | | hypothetical protein | 0.86 | 12 |
| Sinorhizobium meliloti 1021 | 0.92 | SMc02124 | | nitrite reductase | 0.77 | SMc02812 | | hypothetical protein | low | > 103 |
| Rhizobium sp. OAE497 | 0.91 | ABIE40_RS09150 | | nitrite/sulfite reductase | 0.76 | ABIE40_RS19180 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.64 | Ga0059261_1498 | | Sulfite reductase, beta subunit (hemoprotein) | 0.49 | Ga0059261_2216 | | pyridoxal phosphate enzyme, YggS family | low | > 68 |
| Bosea sp. OAE506 | 0.63 | ABIE41_RS15335 | | nitrite/sulfite reductase | 0.58 | ABIE41_RS04720 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 77 |
| Dinoroseobacter shibae DFL-12 | 0.62 | Dshi_1153 | | nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein (RefSeq) | 0.53 | Dshi_0042 | | alanine racemase domain protein (RefSeq) | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.61 | A4249_RS09665 | | nitrite/sulfite reductase | 0.53 | A4249_RS13760 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 48 |
| Azospirillum sp. SherDot2 | 0.61 | MPMX19_00652 | | Sulfite reductase [ferredoxin] | 0.60 | MPMX19_00050 | | Pyridoxal phosphate homeostasis protein | low | > 112 |
| Caulobacter crescentus NA1000 Δfur | 0.60 | CCNA_01177 | | sulfite reductase, beta subunit | 0.51 | CCNA_03861 | | pyridoxal 5'-phosphate dependent enzyme class III | low | > 67 |
| Caulobacter crescentus NA1000 | 0.60 | CCNA_01177 | | sulfite reductase, beta subunit | 0.51 | CCNA_03861 | | pyridoxal 5'-phosphate dependent enzyme class III | low | > 66 |
| Azospirillum brasilense Sp245 | 0.60 | AZOBR_RS10125 | | sulfite reductase | 0.62 | AZOBR_RS01870 | | alanine racemase | — | — |
| Rhodopseudomonas palustris CGA009 | 0.60 | TX73_021840 | | nitrite/sulfite reductase | 0.59 | TX73_001485 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 86 |
| Rhodospirillum rubrum S1H | 0.60 | Rru_A1931 | | Ferredoxin--nitrite reductase (NCBI) | 0.57 | Rru_A3634 | | Protein of unknown function UPF0001 (NCBI) | — | — |
| Phaeobacter inhibens DSM 17395 | 0.58 | PGA1_c20760 | | putative nitrite/sulfite reductase | 0.53 | PGA1_c33360 | | putative alanine racemase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.57 | HSERO_RS15550 | | sulfite reductase | 0.35 | HSERO_RS18995 | | hypothetical protein | low | > 78 |
| Paraburkholderia sabiae LMG 24235 | 0.57 | QEN71_RS25255 | | nitrite/sulfite reductase | 0.35 | QEN71_RS26595 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 153 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.56 | Psyr_2462 | | Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region | 0.31 | Psyr_0477 | | Protein of unknown function UPF0001 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.56 | Psyr_2462 | | Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region | 0.31 | Psyr_0477 | | Protein of unknown function UPF0001 | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.56 | PfGW456L13_3285 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | 0.27 | PfGW456L13_1011 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | low | > 87 |
| Pseudomonas sp. S08-1 | 0.56 | OH686_03470 | | Sulfite reductase [NADPH] hemoprotein beta-component | 0.30 | OH686_10975 | | Pyridoxal phosphate-containing protein YggS | low | > 80 |
| Burkholderia phytofirmans PsJN | 0.56 | BPHYT_RS04725 | | sulfite reductase | 0.34 | BPHYT_RS03495 | | hypothetical protein | 0.61 | 70 |
| Ralstonia solanacearum IBSBF1503 | 0.55 | RALBFv3_RS04600 | | sulfite reductase | 0.51 | RALBFv3_RS20285 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 76 |
| Ralstonia solanacearum UW163 | 0.55 | UW163_RS09070 | | sulfite reductase | 0.51 | UW163_RS18890 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Dechlorosoma suillum PS | 0.55 | Dsui_1986 | | sulfite reductase, beta subunit (hemoprotein) | 0.30 | Dsui_0603 | | pyridoxal phosphate enzyme, YggS family | — | — |
| Ralstonia solanacearum GMI1000 | 0.55 | RS_RS12170 | | nitrite/sulfite reductase | 0.53 | RS_RS20395 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.55 | ABZR87_RS00210 | | nitrite/sulfite reductase | 0.33 | ABZR87_RS01225 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 80 |
| Pseudomonas fluorescens FW300-N2E2 | 0.55 | Pf6N2E2_2073 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | 0.27 | Pf6N2E2_4601 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | low | > 103 |
| Pseudomonas fluorescens FW300-N2E3 | 0.55 | AO353_22865 | | sulfite reductase | 0.31 | AO353_10505 | | hypothetical protein | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.55 | AO356_00555 | | sulfite reductase | 0.29 | AO356_13425 | | hypothetical protein | low | > 104 |
| Cupriavidus basilensis FW507-4G11 | 0.55 | RR42_RS16270 | | sulfite reductase | 0.28 | RR42_RS17355 | | hypothetical protein | low | > 128 |
| Pseudomonas sp. RS175 | 0.55 | PFR28_01366 | | Sulfite reductase [ferredoxin] | 0.26 | PFR28_04242 | | Pyridoxal phosphate homeostasis protein | low | > 88 |
| Paraburkholderia graminis OAS925 | 0.55 | ABIE53_001226 | | sulfite reductase (NADPH) hemoprotein beta-component | 0.34 | ABIE53_000841 | | pyridoxal phosphate enzyme (YggS family) | low | > 113 |
| Ralstonia solanacearum PSI07 | 0.55 | RPSI07_RS12775 | | nitrite/sulfite reductase | 0.51 | RPSI07_RS02580 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 81 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.55 | H281DRAFT_00114 | | sulfite reductase (NADPH) beta subunit | 0.34 | H281DRAFT_04680 | | hypothetical protein | low | > 103 |
| Pseudomonas fluorescens SBW25 | 0.54 | PFLU_RS12980 | | nitrite/sulfite reductase | 0.27 | PFLU_RS28370 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.54 | PFLU_RS12980 | | nitrite/sulfite reductase | 0.27 | PFLU_RS28370 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 109 |
| Pseudomonas simiae WCS417 | 0.54 | PS417_12290 | | sulfite reductase | 0.28 | PS417_26725 | | hypothetical protein | low | > 88 |
| Pseudomonas putida KT2440 | 0.54 | PP_2371 | | Sulphite reductase hemoprotein, beta subunit | 0.28 | PP_5094 | | putative enzyme with PLP binding domain | low | > 96 |
| Marinobacter adhaerens HP15 | 0.54 | HP15_1795 | | sulfite reductase hemoprotein, beta subunit | 0.26 | HP15_288 | | alanine racemase domain protein | low | > 73 |
| Acinetobacter radioresistens SK82 | 0.53 | MPMX26_00614 | | Sulfite reductase [ferredoxin] | 0.27 | MPMX26_02404 | | Pyridoxal phosphate homeostasis protein | low | > 36 |
| Pseudomonas stutzeri RCH2 | 0.53 | Psest_2089 | | Sulfite reductase, beta subunit (hemoprotein) | 0.29 | Psest_0284 | | pyridoxal phosphate enzyme, YggS family | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.49 | GFF4293 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | 0.32 | GFF2722 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | low | > 90 |
| Acidovorax sp. GW101-3H11 | 0.49 | Ac3H11_577 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | 0.29 | Ac3H11_4474 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | low | > 79 |
| Variovorax sp. SCN45 | 0.48 | GFF1206 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | 0.31 | GFF3744 | | Pyridoxal phosphate-containing protein YggS | — | — |
| Variovorax sp. OAS795 | 0.48 | ABID97_RS15380 | | nitrite/sulfite reductase | 0.32 | ABID97_RS00250 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Synechococcus elongatus PCC 7942 | 0.14 | Synpcc7942_1240 | nirA | ferredoxin-nitrite reductase | 0.26 | Synpcc7942_2060 | ylmE | hypothetical protein | — | — |
| Mycobacterium tuberculosis H37Rv | 0.13 | Rv2391 | | Ferredoxin-dependent sulfite reductase SirA | 0.21 | Rv2148c | | Conserved protein | — | — |
| Shewanella oneidensis MR-1 | 0.08 | SO3737 | cysI | sulfite reductase (NADPH) hemoprotein beta-component (cysI) (NCBI ptt file) | 0.32 | SO3352 | | conserved hypothetical protein TIGR00044 (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.08 | Shewana3_0856 | | sulfite reductase subunit beta (RefSeq) | 0.34 | Shewana3_1194 | | hypothetical protein (RefSeq) | low | > 73 |
| Shewanella loihica PV-4 | 0.08 | Shew_0666 | | sulfite reductase subunit beta (RefSeq) | 0.37 | Shew_1137 | | alanine racemase domain-containing protein (RefSeq) | low | > 60 |
| Vibrio cholerae E7946 ATCC 55056 | 0.07 | CSW01_02015 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.34 | CSW01_02455 | | YggS family pyridoxal phosphate enzyme | low | > 62 |
| Castellaniella sp019104865 MT123 | 0.07 | ABCV34_RS00215 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.33 | ABCV34_RS02955 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 48 |
| Lysobacter sp. OAE881 | 0.07 | ABIE51_RS15830 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.31 | ABIE51_RS16060 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 62 |
| Dickeya dianthicola 67-19 | 0.07 | HGI48_RS17010 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.31 | HGI48_RS17345 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 71 |
| Dickeya dianthicola ME23 | 0.07 | DZA65_RS18085 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.40 | DZA65_RS03335 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 75 |
| Klebsiella michiganensis M5al | 0.07 | BWI76_RS22760 | | sulfite reductase subunit beta | 0.31 | BWI76_RS24100 | | YggS family pyridoxal phosphate enzyme | low | > 92 |
| Escherichia coli ECOR38 | 0.07 | HEPCGN_19090 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.30 | HEPCGN_18560 | yggS | pyridoxal phosphate homeostasis protein | low | > 85 |
| Escherichia fergusonii Becca | 0.07 | EFB2_01154 | | Sulfite reductase [NADPH] hemoprotein beta-component | 0.30 | EFB2_00951 | | Pyridoxal phosphate homeostasis protein | low | > 86 |
| Escherichia coli ECOR27 | 0.07 | NOLOHH_12190 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.30 | NOLOHH_11125 | yggS | pyridoxal phosphate homeostasis protein | low | > 57 |
| Escherichia coli ECRC102 | 0.07 | NIAGMN_18145 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.30 | NIAGMN_17020 | yggS | pyridoxal phosphate homeostasis protein | — | — |
| Escherichia coli ECRC99 | 0.07 | KEDOAH_07750 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.30 | KEDOAH_08885 | yggS | pyridoxal phosphate homeostasis protein | — | — |
| Escherichia coli ECRC101 | 0.07 | OKFHMN_20375 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.30 | OKFHMN_19255 | yggS | pyridoxal phosphate homeostasis protein | — | — |
| Escherichia coli ECRC101 | 0.07 | MCAODC_10900 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.30 | MCAODC_09775 | yggS | pyridoxal phosphate homeostasis protein | — | — |
| Escherichia coli ECRC62 | 0.07 | BNILDI_10740 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.30 | BNILDI_09705 | yggS | pyridoxal phosphate homeostasis protein | — | — |
| Escherichia coli ECRC98 | 0.07 | JDDGAC_24040 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.30 | JDDGAC_22885 | yggS | pyridoxal phosphate homeostasis protein | — | — |
| Rahnella sp. WP5 | 0.07 | EX31_RS07900 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.29 | EX31_RS02685 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 89 |
| Escherichia coli Nissle 1917 | 0.07 | ECOLIN_RS15405 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.30 | ECOLIN_RS16415 | | pyridoxal phosphate homeostasis protein | low | > 52 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.07 | OHPLBJKB_00970 | | Sulfite reductase [NADPH] hemoprotein beta-component | 0.30 | OHPLBJKB_00765 | | Pyridoxal phosphate homeostasis protein | low | > 73 |
| Shewanella amazonensis SB2B | 0.06 | Sama_2838 | | sulfite reductase subunit beta (RefSeq) | 0.33 | Sama_2477 | | hypothetical protein (RefSeq) | low | > 62 |
| Serratia liquefaciens MT49 | 0.06 | IAI46_03690 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.25 | IAI46_21410 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 86 |
| Pantoea sp. MT58 | 0.06 | IAI47_04155 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.29 | IAI47_03595 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 76 |
Not shown: 1 genomes with orthologs for Atu1456 only; 30 genomes with orthologs for Atu2747 only