Conservation of cofitness between Atu1688 and Atu1075 in Agrobacterium fabrum C58

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu1688 indole-3-glycerol-phosphate synthase 1.0 Atu1075 amidophosphoribosyltransferase 0.85 17
Rhizobium sp. OAE497 0.83 ABIE40_RS09550 indole-3-glycerol phosphate synthase TrpC 0.87 ABIE40_RS06270 amidophosphoribosyltransferase — —
Sinorhizobium meliloti 1021 0.78 SMc00236 Indole-3-glycerol phosphate synthase 0.84 SMc00554 amidophosphoribosyltransferase 0.79 14
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_0756 indole-3-glycerol phosphate synthase 0.27 Psyr_1668 amidophosphoribosyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_0756 indole-3-glycerol phosphate synthase 0.27 Psyr_1668 amidophosphoribosyltransferase low > 86
Rhodopseudomonas palustris CGA009 0.67 TX73_014985 indole-3-glycerol phosphate synthase TrpC 0.61 TX73_015990 amidophosphoribosyltransferase — —
Bosea sp. OAE506 0.58 ABIE41_RS17425 indole-3-glycerol phosphate synthase TrpC 0.65 ABIE41_RS17810 amidophosphoribosyltransferase — —
Phaeobacter inhibens DSM 17395 0.56 PGA1_c16910 indole-3-glycerol phosphate synthase TrpC 0.51 PGA1_c10810 amidophosphoribosyltransferase PurF — —
Azospirillum sp. SherDot2 0.55 MPMX19_01014 Indole-3-glycerol phosphate synthase 0.57 MPMX19_00906 Amidophosphoribosyltransferase 0.81 2
Caulobacter crescentus NA1000 Δfur 0.54 CCNA_01976 Indole-3-glycerol phosphate synthase 0.62 CCNA_01730 amidophosphoribosyltransferase low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.54 A4249_RS06175 indole-3-glycerol phosphate synthase TrpC 0.56 A4249_RS03735 amidophosphoribosyltransferase — —
Caulobacter crescentus NA1000 0.54 CCNA_01976 Indole-3-glycerol phosphate synthase 0.62 CCNA_01730 amidophosphoribosyltransferase low > 66
Dinoroseobacter shibae DFL-12 0.53 Dshi_1800 Indole-3-glycerol-phosphate synthase (RefSeq) 0.50 Dshi_2132 amidophosphoribosyltransferase (RefSeq) — —
Azospirillum brasilense Sp245 0.53 AZOBR_RS07450 indole-3-glycerol-phosphate synthase 0.57 AZOBR_RS08310 amidophosphoribosyltransferase 0.81 23
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_12280 trpC indole-3-glycerol phosphate synthase TrpC 0.27 OKGIIK_05570 purF amidophosphoribosyltransferase low > 52
Sphingomonas koreensis DSMZ 15582 0.51 Ga0059261_0930 indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.55 Ga0059261_3626 amidophosphoribosyltransferase (EC 2.4.2.14) — —
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS12065 indole-3-glycerol phosphate synthase TrpC 0.28 ABZR86_RS06775 amidophosphoribosyltransferase 0.95 7
Magnetospirillum magneticum AMB-1 0.50 AMB_RS14415 indole-3-glycerol phosphate synthase TrpC 0.55 AMB_RS10545 amidophosphoribosyltransferase — —
Lysobacter sp. OAE881 0.50 ABIE51_RS04190 indole-3-glycerol phosphate synthase TrpC 0.28 ABIE51_RS06180 amidophosphoribosyltransferase low > 62
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.622.1 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.27 Xcc-8004.4073.1 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.70 53
Marinobacter adhaerens HP15 0.50 HP15_3291 indole-3-glycerol phosphate synthase 0.27 HP15_1821 amidophosphoribosyltransferase — —
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS18310 indole-3-glycerol-phosphate synthase 0.26 RR42_RS14325 amidophosphoribosyltransferase — —
Rhodospirillum rubrum S1H 0.49 Rru_A1897 Indole-3-glycerol-phosphate synthase (NCBI) 0.56 Rru_A0404 Amidophosphoribosyl transferase (NCBI) low > 58
Pseudomonas simiae WCS417 0.48 PS417_25710 indole-3-glycerol-phosphate synthase 0.27 PS417_18535 amidophosphoribosyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.48 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.27 PFLU_RS20515 amidophosphoribosyltransferase 0.58 24
Pseudomonas fluorescens SBW25 0.48 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.27 PFLU_RS20515 amidophosphoribosyltransferase low > 109
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_07210 indole-3-glycerol-phosphate synthase 0.27 AO353_20690 amidophosphoribosyltransferase — —
Pseudomonas sp. S08-1 0.47 OH686_15140 Indole-3-glycerol phosphate synthase 0.27 OH686_04420 amidophosphoribosyltransferase — —
Pseudomonas stutzeri RCH2 0.47 Psest_3647 Indole-3-glycerol phosphate synthase 0.27 Psest_2579 amidophosphoribosyltransferase 0.49 46
Ralstonia solanacearum GMI1000 0.47 RS_RS14450 Indole-3-glycerol phosphate synthase 1 0.28 RS_RS09930 amidophosphoribosyltransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.47 GFF3111 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.27 GFF300 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Ralstonia solanacearum PSI07 0.47 RPSI07_RS10735 indole-3-glycerol phosphate synthase TrpC 0.28 RPSI07_RS14765 amidophosphoribosyltransferase — —
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS02160 indole-3-glycerol phosphate synthase TrpC 0.26 ABZR87_RS14465 amidophosphoribosyltransferase — —
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_1222 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.26 PfGW456L13_3935 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Rhodanobacter denitrificans FW104-10B01 0.47 LRK54_RS11570 indole-3-glycerol phosphate synthase TrpC 0.27 LRK54_RS01340 amidophosphoribosyltransferase 0.51 26
Acidovorax sp. GW101-3H11 0.47 Ac3H11_772 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.27 Ac3H11_2608 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.86 22
Variovorax sp. OAS795 0.47 ABID97_RS05280 indole-3-glycerol phosphate synthase TrpC 0.26 ABID97_RS21635 amidophosphoribosyltransferase — —
Pseudomonas sp. RS175 0.46 PFR28_04043 Indole-3-glycerol phosphate synthase 0.26 PFR28_02811 Amidophosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_14440 indole-3-glycerol-phosphate synthase 0.26 AO356_21465 amidophosphoribosyltransferase 0.79 39
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_4826 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.26 Pf6N2E2_76 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Castellaniella sp019104865 MT123 0.46 ABCV34_RS10310 indole-3-glycerol phosphate synthase TrpC 0.25 ABCV34_RS04130 amidophosphoribosyltransferase — —
Dechlorosoma suillum PS 0.46 Dsui_0168 Indole-3-glycerol phosphate synthase 0.29 Dsui_3186 amidophosphoribosyltransferase — —
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS06505 indole-3-glycerol phosphate synthase TrpC 0.27 RALBFv3_RS02550 amidophosphoribosyltransferase — —
Rhodanobacter denitrificans MT42 0.46 LRK55_RS11300 indole-3-glycerol phosphate synthase TrpC 0.27 LRK55_RS01105 amidophosphoribosyltransferase 0.53 19
Ralstonia solanacearum UW163 0.46 UW163_RS07120 indole-3-glycerol phosphate synthase TrpC 0.27 UW163_RS11175 amidophosphoribosyltransferase — —
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS19450 indole-3-glycerol-phosphate synthase 0.26 HSERO_RS16445 amidophosphoribosyltransferase — —
Variovorax sp. SCN45 0.45 GFF5890 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.26 GFF3089 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Pseudomonas putida KT2440 0.45 PP_0422 Indole-3-glycerol phosphate synthase 0.27 PP_2000 amidophosphoribosyl transferase low > 96
Acinetobacter radioresistens SK82 0.45 MPMX26_00983 Indole-3-glycerol phosphate synthase 0.26 MPMX26_01122 Amidophosphoribosyltransferase low > 36
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS27565 indole-3-glycerol phosphate synthase TrpC 0.26 QEN71_RS17680 amidophosphoribosyltransferase 0.91 13
Paraburkholderia graminis OAS925 0.43 ABIE53_003643 indole-3-glycerol phosphate synthase 0.27 ABIE53_004816 amidophosphoribosyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_05712 indole-3-glycerol phosphate synthase 0.27 H281DRAFT_06060 amidophosphoribosyltransferase 0.56 25
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS17405 indole-3-glycerol phosphate synthase 0.27 BPHYT_RS33840 amidophosphoribosyltransferase 0.74 37
Synechococcus elongatus PCC 7942 0.33 Synpcc7942_1197 trpC indole-3-glycerol-phosphate synthase 0.36 Synpcc7942_0004 purF amidophosphoribosyltransferase — —
Parabacteroides merdae CL09T00C40 0.31 HMPREF1078_RS00130 indole-3-glycerol phosphate synthase TrpC 0.15 HMPREF1078_RS10430 amidophosphoribosyltransferase low > 61
Mycobacterium tuberculosis H37Rv 0.29 Rv1611 Probable indole-3-glycerol phosphate synthase TrpC 0.36 Rv0808 Amidophosphoribosyltransferase PurF (glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (gpatase) — —
Phocaeicola dorei CL03T12C01 0.26 ABI39_RS21065 indole-3-glycerol phosphate synthase TrpC 0.15 ABI39_RS18960 amidophosphoribosyltransferase low > 72
Phocaeicola vulgatus CL09T03C04 0.26 HMPREF1058_RS07190 indole-3-glycerol phosphate synthase TrpC 0.15 HMPREF1058_RS04675 amidophosphoribosyltransferase low > 67
Methanococcus maripaludis S2 0.20 MMP_RS05215 indole-3-glycerol phosphate synthase TrpC 0.34 MMP_RS05915 amidophosphoribosyltransferase — —
Methanococcus maripaludis JJ 0.20 MMJJ_RS09165 indole-3-glycerol phosphate synthase TrpC 0.35 MMJJ_RS08440 amidophosphoribosyltransferase — —
Desulfovibrio vulgaris Hildenborough JW710 0.19 DVU0468 trpC indole-3-glycerol phosphate synthase (TIGR) 0.41 DVU0161 purF amidophosphoribosyltransferase (TIGR) — —

Not shown: 7 genomes with orthologs for Atu1688 only; 35 genomes with orthologs for Atu1075 only