Conservation of cofitness between Atu1688 and Atu0017 in Agrobacterium fabrum C58

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu1688 indole-3-glycerol-phosphate synthase 1.0 Atu0017 N-(5-phosphoribosyl) anthranilate isomerase 0.94 3
Rhizobium sp. OAE497 0.83 ABIE40_RS09550 indole-3-glycerol phosphate synthase TrpC 0.74 ABIE40_RS19330 phosphoribosylanthranilate isomerase — —
Sinorhizobium meliloti 1021 0.78 SMc00236 Indole-3-glycerol phosphate synthase 0.66 SMc02767 N-(5'-phosphoribosyl)anthranilate isomerase 0.95 4
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_0756 indole-3-glycerol phosphate synthase 0.23 Psyr_1663 phosphoribosylanthranilate isomerase low > 86
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_0756 indole-3-glycerol phosphate synthase 0.23 Psyr_1663 phosphoribosylanthranilate isomerase low > 86
Rhodopseudomonas palustris CGA009 0.67 TX73_014985 indole-3-glycerol phosphate synthase TrpC 0.43 TX73_000355 phosphoribosylanthranilate isomerase — —
Bosea sp. OAE506 0.58 ABIE41_RS17425 indole-3-glycerol phosphate synthase TrpC 0.45 ABIE41_RS04265 phosphoribosylanthranilate isomerase — —
Phaeobacter inhibens DSM 17395 0.56 PGA1_c16910 indole-3-glycerol phosphate synthase TrpC 0.43 PGA1_c04860 N-(5'-phosphoribosyl)anthranilate isomerase TrpF — —
Azospirillum sp. SherDot2 0.55 MPMX19_01014 Indole-3-glycerol phosphate synthase 0.42 MPMX19_02207 N-(5'-phosphoribosyl)anthranilate isomerase 0.67 36
Caulobacter crescentus NA1000 Δfur 0.54 CCNA_01976 Indole-3-glycerol phosphate synthase 0.40 CCNA_03659 N-(5'-phosphoribosyl)anthranilate isomerase low > 67
Caulobacter crescentus NA1000 0.54 CCNA_01976 Indole-3-glycerol phosphate synthase 0.40 CCNA_03659 N-(5'-phosphoribosyl)anthranilate isomerase 0.97 2
Brevundimonas sp. GW460-12-10-14-LB2 0.54 A4249_RS06175 indole-3-glycerol phosphate synthase TrpC 0.41 A4249_RS11335 phosphoribosylanthranilate isomerase — —
Dinoroseobacter shibae DFL-12 0.53 Dshi_1800 Indole-3-glycerol-phosphate synthase (RefSeq) 0.36 Dshi_1029 Phosphoribosylanthranilate isomerase (RefSeq) — —
Azospirillum brasilense Sp245 0.53 AZOBR_RS07450 indole-3-glycerol-phosphate synthase 0.40 AZOBR_RS03140 N-(5'-phosphoribosyl)anthranilate isomerase — —
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_12280 trpC indole-3-glycerol phosphate synthase TrpC 0.21 OKGIIK_04835 phosphoribosylanthranilate isomerase low > 52
Sphingomonas koreensis DSMZ 15582 0.51 Ga0059261_0930 indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.38 Ga0059261_0237 phosphoribosylanthranilate isomerase (EC 5.3.1.24) 0.98 2
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS12065 indole-3-glycerol phosphate synthase TrpC 0.23 ABZR86_RS08010 phosphoribosylanthranilate isomerase 0.94 14
Magnetospirillum magneticum AMB-1 0.50 AMB_RS14415 indole-3-glycerol phosphate synthase TrpC 0.47 AMB_RS20250 N-(5'-phosphoribosyl)anthranilate isomerase — —
Lysobacter sp. OAE881 0.50 ABIE51_RS04190 indole-3-glycerol phosphate synthase TrpC 0.21 ABIE51_RS08250 phosphoribosylanthranilate isomerase 0.90 2
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.622.1 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.23 Xcc-8004.1962.1 Phosphoribosylanthranilate isomerase (EC 5.3.1.24) 0.88 13
Marinobacter adhaerens HP15 0.50 HP15_3291 indole-3-glycerol phosphate synthase 0.26 HP15_1828 phosphoribosylanthranilate isomerase 0.89 3
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS18310 indole-3-glycerol-phosphate synthase 0.25 RR42_RS14365 N-(5'-phosphoribosyl)anthranilate isomerase 0.34 7
Rhodospirillum rubrum S1H 0.49 Rru_A1897 Indole-3-glycerol-phosphate synthase (NCBI) 0.39 Rru_A3425 Phosphoribosylanthranilate isomerase (NCBI) 0.77 33
Pseudomonas simiae WCS417 0.48 PS417_25710 indole-3-glycerol-phosphate synthase 0.26 PS417_18560 N-(5'-phosphoribosyl)anthranilate isomerase 0.88 2
Pseudomonas fluorescens SBW25 0.48 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.24 PFLU_RS20540 phosphoribosylanthranilate isomerase 0.77 5
Pseudomonas fluorescens SBW25-INTG 0.48 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.24 PFLU_RS20540 phosphoribosylanthranilate isomerase 0.93 2
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_07210 indole-3-glycerol-phosphate synthase 0.24 AO353_20665 N-(5'-phosphoribosyl)anthranilate isomerase 0.96 2
Pseudomonas stutzeri RCH2 0.47 Psest_3647 Indole-3-glycerol phosphate synthase 0.23 Psest_2584 Phosphoribosylanthranilate isomerase 0.94 2
Ralstonia solanacearum GMI1000 0.47 RS_RS14450 Indole-3-glycerol phosphate synthase 1 0.29 RS_RS09970 phosphoribosylanthranilate isomerase — —
Pseudomonas sp. S08-1 0.47 OH686_15140 Indole-3-glycerol phosphate synthase 0.24 OH686_04445 Phosphoribosylanthranilate isomerase 0.87 6
Hydrogenophaga sp. GW460-11-11-14-LB1 0.47 GFF3111 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.23 GFF3356 Phosphoribosylanthranilate isomerase (EC 5.3.1.24) 0.94 3
Ralstonia solanacearum PSI07 0.47 RPSI07_RS10735 indole-3-glycerol phosphate synthase TrpC 0.27 RPSI07_RS14725 phosphoribosylanthranilate isomerase — —
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_1222 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.25 PfGW456L13_3940 Phosphoribosylanthranilate isomerase (EC 5.3.1.24) 0.98 1
Rhodanobacter denitrificans FW104-10B01 0.47 LRK54_RS11570 indole-3-glycerol phosphate synthase TrpC 0.23 LRK54_RS01695 phosphoribosylanthranilate isomerase — —
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS02160 indole-3-glycerol phosphate synthase TrpC 0.27 ABZR87_RS14505 phosphoribosylanthranilate isomerase 0.88 4
Variovorax sp. OAS795 0.47 ABID97_RS05280 indole-3-glycerol phosphate synthase TrpC 0.17 ABID97_RS08435 phosphoribosylanthranilate isomerase 0.82 1
Acidovorax sp. GW101-3H11 0.47 Ac3H11_772 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.18 Ac3H11_1533 Phosphoribosylanthranilate isomerase (EC 5.3.1.24) 0.98 1
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_4826 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.24 Pf6N2E2_71 Phosphoribosylanthranilate isomerase (EC 5.3.1.24) 0.97 1
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_14440 indole-3-glycerol-phosphate synthase 0.24 AO356_21440 N-(5'-phosphoribosyl)anthranilate isomerase 0.95 4
Pseudomonas sp. RS175 0.46 PFR28_04043 Indole-3-glycerol phosphate synthase 0.25 PFR28_02816 'N-(5'-phosphoribosyl)anthranilate isomerase' transl_table=11 — —
Castellaniella sp019104865 MT123 0.46 ABCV34_RS10310 indole-3-glycerol phosphate synthase TrpC 0.22 ABCV34_RS04250 phosphoribosylanthranilate isomerase — —
Ralstonia solanacearum UW163 0.46 UW163_RS07120 indole-3-glycerol phosphate synthase TrpC 0.28 UW163_RS11135 phosphoribosylanthranilate isomerase — —
Rhodanobacter denitrificans MT42 0.46 LRK55_RS11300 indole-3-glycerol phosphate synthase TrpC 0.23 LRK55_RS01475 phosphoribosylanthranilate isomerase — —
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS06505 indole-3-glycerol phosphate synthase TrpC 0.28 RALBFv3_RS02590 phosphoribosylanthranilate isomerase — —
Dechlorosoma suillum PS 0.46 Dsui_0168 Indole-3-glycerol phosphate synthase 0.25 Dsui_3193 phosphoribosylanthranilate isomerase — —
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS19450 indole-3-glycerol-phosphate synthase 0.27 HSERO_RS16480 N-(5'-phosphoribosyl)anthranilate isomerase 0.90 5
Variovorax sp. SCN45 0.45 GFF5890 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.17 GFF3884 Phosphoribosylanthranilate isomerase (EC 5.3.1.24) — —
Pseudomonas putida KT2440 0.45 PP_0422 Indole-3-glycerol phosphate synthase 0.24 PP_1995 N-(5'-phosphoribosyl)anthranilate isomerase 0.94 3
Acinetobacter radioresistens SK82 0.45 MPMX26_00983 Indole-3-glycerol phosphate synthase 0.25 MPMX26_02618 N-(5'-phosphoribosyl)anthranilate isomerase 0.99 4
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS27565 indole-3-glycerol phosphate synthase TrpC 0.22 QEN71_RS17640 phosphoribosylanthranilate isomerase 0.97 2
Paraburkholderia graminis OAS925 0.43 ABIE53_003643 indole-3-glycerol phosphate synthase 0.22 ABIE53_004808 phosphoribosylanthranilate isomerase — —
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_05712 indole-3-glycerol phosphate synthase 0.23 H281DRAFT_06068 phosphoribosylanthranilate isomerase 0.68 12
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS17405 indole-3-glycerol phosphate synthase 0.24 BPHYT_RS33880 N-(5'-phosphoribosyl)anthranilate isomerase 0.88 1
Pedobacter sp. GW460-11-11-14-LB5 0.36 CA265_RS22900 indole-3-glycerol phosphate synthase 0.29 CA265_RS05015 N-(5'-phosphoribosyl)anthranilate isomerase — —
Synechococcus elongatus PCC 7942 0.33 Synpcc7942_1197 trpC indole-3-glycerol-phosphate synthase 0.29 Synpcc7942_0408 trpF N-(5'-phosphoribosyl)anthranilate isomerase — —
Bacteroides thetaiotaomicron VPI-5482 0.32 BT0529 indole-3-glycerol phosphate synthase (NCBI ptt file) 0.26 BT0528 phosphoribosylanthranilate isomerase (EC 5.3.1.24) (from data) 0.79 31
Bacteroides ovatus ATCC 8483 0.31 BACOVA_03783 indole-3-glycerol phosphate synthase 0.26 BACOVA_03784 N-(5'phosphoribosyl)anthranilate isomerase 0.96 2
Echinicola vietnamensis KMM 6221, DSM 17526 0.31 Echvi_2508 Indole-3-glycerol phosphate synthase 0.19 Echvi_2509 Phosphoribosylanthranilate isomerase — —
Parabacteroides merdae CL09T00C40 0.31 HMPREF1078_RS00130 indole-3-glycerol phosphate synthase TrpC 0.27 HMPREF1078_RS00125 phosphoribosylanthranilate isomerase 0.94 36
Mucilaginibacter yixingensis YX-36 DSM 26809 0.30 ABZR88_RS16605 indole-3-glycerol phosphate synthase TrpC 0.25 ABZR88_RS10670 phosphoribosylanthranilate isomerase — —
Bacteroides stercoris CC31F 0.27 HMPREF1181_RS15340 indole-3-glycerol phosphate synthase TrpC 0.26 HMPREF1181_RS15345 phosphoribosylanthranilate isomerase 0.96 5
Phocaeicola dorei CL03T12C01 0.26 ABI39_RS21065 indole-3-glycerol phosphate synthase TrpC 0.25 ABI39_RS21070 phosphoribosylanthranilate isomerase — —
Phocaeicola vulgatus CL09T03C04 0.26 HMPREF1058_RS07190 indole-3-glycerol phosphate synthase TrpC 0.26 HMPREF1058_RS07195 phosphoribosylanthranilate isomerase 0.94 4
Methanococcus maripaludis JJ 0.20 MMJJ_RS09165 indole-3-glycerol phosphate synthase TrpC 0.18 MMJJ_RS09185 phosphoribosylanthranilate isomerase — —
Methanococcus maripaludis S2 0.20 MMP_RS05215 indole-3-glycerol phosphate synthase TrpC 0.18 MMP_RS05195 phosphoribosylanthranilate isomerase — —

Not shown: 3 genomes with orthologs for Atu1688 only; 3 genomes with orthologs for Atu0017 only