Conservation of cofitness between ABZR87_RS12630 and ABZR87_RS15680 in Ralstonia sp. UNC404CL21Col

75 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia sp. UNC404CL21Col 1.0 ABZR87_RS12630 protein adenylyltransferase SelO 1.0 ABZR87_RS15680 DNA polymerase I 0.49 17
Ralstonia solanacearum PSI07 0.86 RPSI07_RS16295 YdiU family protein 0.90 RPSI07_RS13480 DNA polymerase I low > 81
Ralstonia solanacearum GMI1000 0.86 RS_RS08830 YdiU family protein 0.89 RS_RS11195 DNA polymerase I low > 80
Ralstonia solanacearum IBSBF1503 0.85 RALBFv3_RS01180 YdiU family protein 0.90 RALBFv3_RS03750 DNA polymerase I low > 76
Ralstonia solanacearum UW163 0.85 UW163_RS14490 YdiU family protein 0.90 UW163_RS09920 DNA polymerase I — —
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS11160 hypothetical protein 0.77 RR42_RS15050 DNA polymerase I low > 128
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS21900 YdiU family protein 0.69 QEN71_RS17885 DNA polymerase I — —
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_00914 Uncharacterized conserved protein YdiU, UPF0061 family 0.66 H281DRAFT_06022 DNA polymerase I low > 103
Paraburkholderia graminis OAS925 0.56 ABIE53_002149 uncharacterized protein YdiU (UPF0061 family) 0.67 ABIE53_004852 DNA polymerase-1 low > 113
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS09550 hypothetical protein 0.67 BPHYT_RS33610 DNA polymerase I low > 109
Acidovorax sp. GW101-3H11 0.52 Ac3H11_2534 Selenoprotein O and cysteine-containing homologs 0.58 Ac3H11_1648 DNA polymerase I (EC 2.7.7.7) — —
Variovorax sp. SCN45 0.51 GFF1330 UPF0061 protein YdiU 0.60 GFF4006 DNA polymerase I (EC 2.7.7.7) low > 127
Variovorax sp. OAS795 0.50 ABID97_RS15700 protein adenylyltransferase SelO 0.60 ABID97_RS09180 DNA polymerase I low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.50 GFF4580 Selenoprotein O and cysteine-containing homologs 0.58 GFF5584 DNA polymerase I (EC 2.7.7.7) low > 90
Herbaspirillum seropedicae SmR1 0.50 HSERO_RS11220 hypothetical protein 0.69 HSERO_RS02260 DNA polymerase I low > 78
Pseudomonas sp. RS175 0.42 PFR28_05043 Protein adenylyltransferase SelO 0.48 PFR28_04624 DNA polymerase I low > 88
Pseudomonas putida KT2440 0.41 PP_5068 conserved protein of unknown function, UPF0061 family 0.50 PP_0123 DNA polymerase I, 5 low > 96
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS02195 YdiU family protein 0.49 PFLU_RS00395 DNA polymerase I low > 109
Pseudomonas fluorescens SBW25 0.41 PFLU_RS02195 YdiU family protein 0.49 PFLU_RS00395 DNA polymerase I low > 109
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_09050 hypothetical protein 0.48 AO356_11465 DNA polymerase I low > 104
Pseudomonas simiae WCS417 0.40 PS417_02140 hypothetical protein 0.49 PS417_00405 DNA polymerase I low > 88
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_12770 hypothetical protein 0.49 AO353_10930 DNA polymerase I low > 101
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_1498 Selenoprotein O and cysteine-containing homologs 0.48 Pf1N1B4_1875 DNA polymerase I (EC 2.7.7.7) — —
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_3692 Selenoprotein O and cysteine-containing homologs 0.49 Pf6N2E2_4162 DNA polymerase I (EC 2.7.7.7) low > 103
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_231 Selenoprotein O and cysteine-containing homologs 0.49 PfGW456L13_594 DNA polymerase I (EC 2.7.7.7) low > 87
Pseudomonas sp. S08-1 0.39 OH686_09805 UPF0061 protein YdiU 0.50 OH686_12215 DNA polymerase I low > 80
Pectobacterium carotovorum WPP14 0.39 HER17_RS08850 YdiU family protein 0.48 HER17_RS21470 DNA polymerase I — —
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_09655 SELO family protein 0.52 CSW01_00560 DNA polymerase I low > 62
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_0494 Protein of unknown function UPF0061 0.47 Psyr_0270 DNA polymerase I low > 86
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_0494 Protein of unknown function UPF0061 0.47 Psyr_0270 DNA polymerase I low > 86
Castellaniella sp019104865 MT123 0.39 ABCV34_RS04315 YdiU family protein 0.58 ABCV34_RS02195 DNA polymerase I low > 48
Escherichia coli ECOR38 0.39 HEPCGN_05490 selO protein adenylyltransferase SelO 0.50 HEPCGN_12785 polA DNA polymerase I — —
Escherichia coli BL21 0.39 ECD_01675 UPF0061 family protein 0.50 ECD_03749 5 — —
Klebsiella michiganensis M5al 0.39 BWI76_RS17085 hypothetical protein 0.49 BWI76_RS00355 DNA polymerase I low > 92
Escherichia coli Nissle 1917 0.39 ECOLIN_RS09535 protein adenylyltransferase SelO 0.50 ECOLIN_RS22270 DNA polymerase I — —
Escherichia coli ECOR27 0.39 NOLOHH_17645 selO protein adenylyltransferase SelO 0.50 NOLOHH_06280 polA DNA polymerase I — —
Escherichia fergusonii Becca 0.39 EFB2_02285 Protein adenylyltransferase SelO 0.50 EFB2_04753 DNA polymerase I — —
Escherichia coli BW25113 0.38 b1706 ydiU hypothetical protein (NCBI) 0.50 b3863 polA DNA polymerase I (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF3534 Selenoprotein O and cysteine-containing homologs 0.49 GFF2216 DNA polymerase I (EC 2.7.7.7) low > 78
Escherichia coli ECRC102 0.38 NIAGMN_00940 selO protein adenylyltransferase SelO 0.50 NIAGMN_11905 polA DNA polymerase I — —
Marinobacter adhaerens HP15 0.38 HP15_1144 protein belonging to uncharacterized protein family UPF0061 0.48 HP15_293 DNA polymerase I low > 73
Escherichia coli ECRC98 0.38 JDDGAC_01700 selO protein adenylyltransferase SelO 0.50 JDDGAC_17775 polA DNA polymerase I — —
Escherichia coli ECRC100 0.38 OKFHMN_27125 selO protein adenylyltransferase SelO 0.50 OKFHMN_14150 polA DNA polymerase I — —
Escherichia coli ECRC101 0.38 MCAODC_18285 selO protein adenylyltransferase SelO 0.50 MCAODC_04650 polA DNA polymerase I — —
Escherichia coli ECRC99 0.38 KEDOAH_00985 selO protein adenylyltransferase SelO 0.50 KEDOAH_14000 polA DNA polymerase I — —
Erwinia tracheiphila SCR3 0.38 LU632_RS10980 YdiU family protein 0.49 LU632_RS23870 polA DNA polymerase I — —
Pantoea sp. MT58 0.37 IAI47_10920 YdiU family protein 0.49 IAI47_00430 DNA polymerase I low > 76
Enterobacter sp. TBS_079 0.37 MPMX20_01907 Protein adenylyltransferase SelO 0.50 MPMX20_04601 DNA polymerase I low > 85
Dickeya dianthicola ME23 0.37 DZA65_RS13470 YdiU family protein 0.50 DZA65_RS22235 DNA polymerase I — —
Dickeya dadantii 3937 0.37 DDA3937_RS12935 YdiU family protein 0.50 DDA3937_RS00105 DNA polymerase I — —
Enterobacter asburiae PDN3 0.37 EX28DRAFT_1713 Uncharacterized conserved protein 0.50 EX28DRAFT_4343 DNA polymerase I (EC 2.7.7.7) — —
Dickeya dianthicola 67-19 0.37 HGI48_RS13010 YdiU family protein 0.50 HGI48_RS21260 DNA polymerase I — —
Pseudomonas stutzeri RCH2 0.36 Psest_0396 Uncharacterized conserved protein 0.50 Psest_4219 DNA polymerase I low > 67
Serratia liquefaciens MT49 0.36 IAI46_11065 YdiU family protein 0.51 IAI46_24985 DNA polymerase I low > 86
Rahnella sp. WP5 0.36 EX31_RS13970 YdiU family protein 0.49 EX31_RS15905 DNA polymerase I low > 89
Lysobacter sp. OAE881 0.34 ABIE51_RS12255 protein adenylyltransferase SelO 0.50 ABIE51_RS02010 DNA polymerase I low > 62
Shewanella loihica PV-4 0.34 Shew_0262 hypothetical protein (RefSeq) 0.49 Shew_3714 DNA polymerase I (RefSeq) low > 60
Sinorhizobium meliloti 1021 0.34 SMc00453 hypothetical protein 0.36 SMc02850 DNA polymerase I low > 103
Bosea sp. OAE506 0.33 ABIE41_RS01530 protein adenylyltransferase SelO 0.35 ABIE41_RS03570 DNA polymerase I 0.28 72
Dyella japonica UNC79MFTsu3.2 0.33 ABZR86_RS00335 protein adenylyltransferase SelO 0.52 ABZR86_RS17015 DNA polymerase I low > 74
Rhizobium sp. OAE497 0.33 ABIE40_RS04755 protein adenylyltransferase SelO 0.36 ABIE40_RS00490 DNA polymerase I low > 107
Shewanella oneidensis MR-1 0.33 SO0330 conserved hypothetical protein (NCBI ptt file) 0.50 SO4669 polA DNA polymerase I (NCBI ptt file) — —
Rhodanobacter sp. FW510-T8 0.33 OKGIIK_09030 selO YdiU family protein 0.51 OKGIIK_16785 polA DNA polymerase I low > 52
Xanthomonas campestris pv. campestris strain 8004 0.33 Xcc-8004.2272.1 Selenoprotein O and cysteine-containing homologs 0.50 Xcc-8004.5105.1 DNA polymerase I (EC 2.7.7.7) — —
Rhodopseudomonas palustris CGA009 0.32 TX73_015750 YdiU family protein 0.36 TX73_024545 DNA polymerase I low > 86
Shewanella sp. ANA-3 0.32 Shewana3_3841 hypothetical protein (RefSeq) 0.50 Shewana3_4109 DNA polymerase I (RefSeq) — —
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS15955 YdiU family protein 0.51 LRK54_RS06840 DNA polymerase I low > 59
Rhodanobacter denitrificans MT42 0.32 LRK55_RS15710 YdiU family protein 0.51 LRK55_RS06585 DNA polymerase I low > 63
Pontibacter actiniarum KMM 6156, DSM 19842 0.31 CA264_03360 hypothetical protein 0.33 CA264_16535 DNA polymerase I — —
Agrobacterium fabrum C58 0.31 Atu0945 hypothetical protein 0.37 Atu0110 DNA polymerase I — —
Dinoroseobacter shibae DFL-12 0.31 Dshi_1157 protein of unknown function UPF0061 (RefSeq) 0.38 Dshi_2909 DNA polymerase I (RefSeq) low > 64
Shewanella amazonensis SB2B 0.29 Sama_2755 hypothetical protein (RefSeq) 0.51 Sama_0093 DNA-directed DNA polymerase (RefSeq) low > 62
Phaeobacter inhibens DSM 17395 0.29 PGA1_c11360 Uncharacterized conserved protein 0.38 PGA1_c31780 DNA polymerase I low > 62
Dechlorosoma suillum PS 0.29 Dsui_1465 hypothetical protein 0.60 Dsui_0459 DNA polymerase I low > 51
Acinetobacter radioresistens SK82 0.29 MPMX26_02624 Protein adenylyltransferase SelO 0.41 MPMX26_00574 DNA polymerase I low > 36
Alteromonas macleodii MIT1002 0.17 MIT1002_03272 hypothetical protein 0.52 MIT1002_00014 DNA polymerase I low > 70

Not shown: 0 genomes with orthologs for ABZR87_RS12630 only; 23 genomes with orthologs for ABZR87_RS15680 only