Conservation of cofitness between A4249_RS06625 and A4249_RS09325 in Brevundimonas sp. GW460-12-10-14-LB2

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Brevundimonas sp. GW460-12-10-14-LB2 1.0 A4249_RS06625 urocanate hydratase 1.0 A4249_RS09325 glycine cleavage system aminomethyltransferase GcvT 0.42 11
Sphingomonas koreensis DSMZ 15582 0.78 Ga0059261_3961 Urocanate hydratase (EC 4.2.1.49) (from data) 0.44 Ga0059261_3256 glycine cleavage system T protein low > 68
Caulobacter crescentus NA1000 0.77 CCNA_01008 urocanate hydratase 0.64 CCNA_03465 glycine cleavage system aminomethyltransferase T low > 66
Cupriavidus basilensis FW507-4G11 0.77 RR42_RS16915 urocanate hydratase 0.27 RR42_RS20060 glycine cleavage system protein T low > 128
Caulobacter crescentus NA1000 Δfur 0.77 CCNA_01008 urocanate hydratase 0.64 CCNA_03465 glycine cleavage system aminomethyltransferase T low > 67
Rahnella sp. WP5 0.75 EX31_RS06760 urocanate hydratase 0.24 EX31_RS21510 glycine cleavage system aminomethyltransferase GcvT low > 89
Serratia liquefaciens MT49 0.75 IAI46_03665 urocanate hydratase 0.24 IAI46_20860 glycine cleavage system aminomethyltransferase GcvT low > 86
Sinorhizobium meliloti 1021 0.75 SM_b21163 Urocanate hydratase (EC 4.2.1.49) (from data) 0.42 SMc02047 glycine cleavage system aminomethyltransferase T low > 103
Dickeya dadantii 3937 0.75 DDA3937_RS14990 urocanate hydratase 0.24 DDA3937_RS03245 glycine cleavage system aminomethyltransferase GcvT low > 74
Variovorax sp. SCN45 0.75 GFF6408 Urocanate hydratase (EC 4.2.1.49) 0.40 GFF6476 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) low > 127
Pantoea sp. MT58 0.75 IAI47_13280 urocanate hydratase 0.25 IAI47_03765 glycine cleavage system aminomethyltransferase GcvT low > 76
Bosea sp. OAE506 0.75 ABIE41_RS23655 urocanate hydratase 0.49 ABIE41_RS22930 glycine cleavage system aminomethyltransferase GcvT low > 77
Phaeobacter inhibens DSM 17395 0.75 PGA1_c36320 Urocanate hydratase (EC 4.2.1.49) (from data) 0.44 PGA1_78p00290 aminomethyltransferase GcvT — —
Pseudomonas sp. S08-1 0.74 OH686_16745 urocanate hydratase 0.27 OH686_11175 glycine cleavage system T protein low > 80
Xanthomonas campestris pv. campestris strain 8004 0.74 Xcc-8004.3298.1 Urocanate hydratase (EC 4.2.1.49) 0.26 Xcc-8004.1567.1 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) low > 74
Pseudomonas sp. RS175 0.74 PFR28_04965 Urocanate hydratase 0.47 PFR28_03385 Aminomethyltransferase low > 88
Agrobacterium fabrum C58 0.74 Atu3931 urocanate hydratase 0.41 Atu1464 glycine cleavage system T protein, aminomethyltransferase low > 89
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_4828 urocanate hydratase 0.48 Psyr_1095 Glycine cleavage system T protein low > 86
Pseudomonas putida KT2440 0.74 PP_5033 Urocanate hydratase 0.48 PP_0986 aminomethyltransferase low > 96
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_4828 urocanate hydratase 0.48 Psyr_1095 Glycine cleavage system T protein low > 86
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_12250 Urocanate hydratase (EC 4.2.1.49) (from data) 0.46 AO353_03510 glycine cleavage system protein T low > 101
Azospirillum sp. SherDot2 0.74 MPMX19_04936 Urocanate hydratase 0.46 MPMX19_01029 Aminomethyltransferase low > 112
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_09630 Urocanate hydratase (EC 4.2.1.49) (from data) 0.46 AO356_18160 glycine cleavage system protein T low > 104
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_3805 Urocanate hydratase (EC 4.2.1.49) (from data) 0.47 Pf6N2E2_5556 Aminomethyltransferase (EC 2.1.2.10) (from data) low > 103
Acidovorax sp. GW101-3H11 0.74 Ac3H11_2557 Urocanate hydratase (EC 4.2.1.49) (from data) 0.44 Ac3H11_165 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) low > 79
Dickeya dianthicola 67-19 0.74 HGI48_RS15085 urocanate hydratase 0.24 HGI48_RS03390 glycine cleavage system aminomethyltransferase GcvT low > 71
Pseudomonas fluorescens FW300-N1B4 0.74 Pf1N1B4_1587 Urocanate hydratase (EC 4.2.1.49) (from data) 0.45 Pf1N1B4_623 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) low > 87
Pseudomonas fluorescens GW456-L13 0.74 PfGW456L13_326 Urocanate hydratase (EC 4.2.1.49) (from data) 0.45 PfGW456L13_1866 Aminomethyltransferase (EC 2.1.2.10) (from data) low > 87
Lysobacter sp. OAE881 0.74 ABIE51_RS06295 urocanate hydratase 0.30 ABIE51_RS16365 glycine cleavage system aminomethyltransferase GcvT low > 62
Dickeya dianthicola ME23 0.74 DZA65_RS15830 urocanate hydratase 0.24 DZA65_RS03435 glycine cleavage system aminomethyltransferase GcvT low > 75
Ralstonia solanacearum PSI07 0.74 RPSI07_RS11910 urocanate hydratase 0.26 RPSI07_RS08585 glycine cleavage system protein T low > 81
Pseudomonas simiae WCS417 0.73 PS417_01720 Urocanate hydratase (EC 4.2.1.49) (from data) 0.48 PS417_22370 Aminomethyltransferase (EC 2.1.2.10) (from data) low > 88
Ralstonia sp. UNC404CL21Col 0.73 ABZR87_RS01030 urocanate hydratase 0.26 ABZR87_RS03925 glycine cleavage system aminomethyltransferase GcvT low > 80
Enterobacter sp. TBS_079 0.73 MPMX20_01399 Urocanate hydratase 0.23 MPMX20_03764 Aminomethyltransferase low > 85
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS01775 urocanate hydratase 0.48 PFLU_RS24010 glycine cleavage system aminomethyltransferase GcvT low > 109
Pseudomonas fluorescens SBW25 0.73 PFLU_RS01775 urocanate hydratase 0.48 PFLU_RS24010 glycine cleavage system aminomethyltransferase GcvT low > 109
Rhodanobacter sp. FW510-T8 0.73 OKGIIK_08350 hutU urocanate hydratase 0.28 OKGIIK_01305 gcvT glycine cleavage system aminomethyltransferase GcvT low > 52
Rhodanobacter denitrificans FW104-10B01 0.73 LRK54_RS16320 urocanate hydratase 0.27 LRK54_RS05510 glycine cleavage system aminomethyltransferase GcvT low > 59
Rhodanobacter denitrificans MT42 0.73 LRK55_RS16070 urocanate hydratase 0.27 LRK55_RS05280 glycine cleavage system aminomethyltransferase GcvT low > 63
Hydrogenophaga sp. GW460-11-11-14-LB1 0.73 GFF3590 Urocanate hydratase (EC 4.2.1.49) 0.45 GFF5213 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) low > 90
Enterobacter asburiae PDN3 0.73 EX28DRAFT_2220 urocanate hydratase (EC 4.2.1.49) 0.24 EX28DRAFT_2957 glycine cleavage system T protein low > 76
Dyella japonica UNC79MFTsu3.2 0.73 ABZR86_RS07755 urocanate hydratase 0.29 ABZR86_RS18875 glycine cleavage system aminomethyltransferase GcvT low > 74
Klebsiella michiganensis M5al 0.72 BWI76_RS08735 Urocanate hydratase (EC 4.2.1.49) (from data) 0.24 BWI76_RS23880 Aminomethyltransferase (EC 2.1.2.10) (from data) low > 92
Rhizobium sp. OAE497 0.72 ABIE40_RS20360 urocanate hydratase 0.43 ABIE40_RS09940 glycine cleavage system aminomethyltransferase GcvT low > 107
Escherichia coli ECOR38 0.72 HEPCGN_01335 hutU urocanate hydratase 0.23 HEPCGN_18810 gcvT glycine cleavage system aminomethyltransferase GcvT low > 87
Ralstonia solanacearum UW163 0.72 UW163_RS08230 urocanate hydratase 0.26 UW163_RS04960 glycine cleavage system protein T — —
Castellaniella sp019104865 MT123 0.72 ABCV34_RS12785 urocanate hydratase 0.25 ABCV34_RS08845 glycine cleavage system aminomethyltransferase GcvT low > 48
Ralstonia solanacearum GMI1000 0.72 RS_RS13255 urocanate hydratase 0.26 RS_RS16500 aminomethyltransferase low > 80
Ralstonia solanacearum IBSBF1503 0.72 RALBFv3_RS05395 urocanate hydratase 0.26 RALBFv3_RS08650 glycine cleavage system protein T low > 76
Rhodospirillum rubrum S1H 0.72 Rru_A1304 Urocanate hydratase (NCBI) 0.47 Rru_A3051 Glycine cleavage system T protein (NCBI) low > 58
Shewanella loihica PV-4 0.72 Shew_3757 urocanate hydratase (RefSeq) 0.24 Shew_3064 gcvT glycine cleavage system aminomethyltransferase T (RefSeq) low > 60
Kangiella aquimarina DSM 16071 0.71 B158DRAFT_1433 urocanate hydratase (EC 4.2.1.49) 0.29 B158DRAFT_0543 glycine cleavage system T protein — —
Burkholderia phytofirmans PsJN 0.71 BPHYT_RS07565 urocanate hydratase 0.31 BPHYT_RS19320 glycine cleavage system protein T low > 109
Shewanella oneidensis MR-1 0.71 SO0097 hutU urocanate hydratase (NCBI ptt file) 0.26 SO0779 gcvT glycine cleavage system T protein (NCBI ptt file) 0.27 47
Azospirillum brasilense Sp245 0.71 AZOBR_RS21740 urocanate hydratase 0.46 AZOBR_RS10470 aminomethyltransferase low > 97
Paraburkholderia graminis OAS925 0.71 ABIE53_001731 urocanate hydratase 0.31 ABIE53_000236 aminomethyltransferase 0.32 66
Paraburkholderia bryophila 376MFSha3.1 0.71 H281DRAFT_04871 urocanate hydratase 0.31 H281DRAFT_02411 aminomethyltransferase low > 103
Shewanella sp. ANA-3 0.71 Shewana3_0100 urocanate hydratase (RefSeq) 0.26 Shewana3_3501 gcvT glycine cleavage system aminomethyltransferase T (RefSeq) low > 73
Paraburkholderia sabiae LMG 24235 0.70 QEN71_RS23505 urocanate hydratase 0.29 QEN71_RS29205 glycine cleavage system aminomethyltransferase GcvT low > 153
Alteromonas macleodii MIT1002 0.70 MIT1002_00904 Urocanate hydratase 0.28 MIT1002_02973 Aminomethyltransferase low > 70
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_06085 urocanate hydratase 0.46 CSW01_15350 glycine cleavage system aminomethyltransferase T low > 62
Pontibacter actiniarum KMM 6156, DSM 19842 0.57 CA264_08875 urocanate hydratase 0.32 CA264_00210 glycine cleavage system protein T — —
Bacteroides stercoris CC31F 0.29 HMPREF1181_RS00360 urocanate hydratase 0.30 HMPREF1181_RS13255 glycine cleavage system aminomethyltransferase GcvT low > 56
Bacteroides thetaiotaomicron VPI-5482 0.28 BT2694 putative urocanate hydratase (NCBI ptt file) 0.28 BT4584 putative aminomethyltransferase (NCBI ptt file) low > 81
Parabacteroides merdae CL09T00C40 0.28 HMPREF1078_RS11595 urocanate hydratase 0.32 HMPREF1078_RS10420 glycine cleavage system aminomethyltransferase GcvT low > 61
Pedobacter sp. GW460-11-11-14-LB5 0.27 CA265_RS22275 urocanate hydratase 0.33 CA265_RS23960 glycine cleavage system protein T low > 88
Phocaeicola dorei CL03T12C01 0.27 ABI39_RS01810 urocanate hydratase 0.29 ABI39_RS18950 glycine cleavage system aminomethyltransferase GcvT low > 72
Bacteroides ovatus ATCC 8483 0.26 BACOVA_00995 urocanate hydratase 0.29 BACOVA_05378 aminomethyltransferase low > 94
Shewanella amazonensis SB2B 0.26 Sama_1632 Urocanate hydratase (EC 4.2.1.49) (from data) 0.25 Sama_2721 gcvT glycine cleavage system aminomethyltransferase T (RefSeq) low > 62

Not shown: 1 genomes with orthologs for A4249_RS06625 only; 27 genomes with orthologs for A4249_RS09325 only