Conservation of cofitness between DvMF_1575 and DvMF_0911 in Desulfovibrio vulgaris Miyazaki F

79 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Desulfovibrio vulgaris Miyazaki F 1.0 DvMF_1575 sulfate transporter (RefSeq) 1.0 DvMF_0911 uracil phosphoribosyltransferase (RefSeq) 0.34 15
Desulfovibrio vulgaris Hildenborough JW710 0.74 DVU0279 sulfate permease family protein (TIGR) 0.93 DVU1025 upp uracil phosphoribosyltransferase (TIGR) — —
Methanococcus maripaludis S2 0.46 MMP_RS02795 sulfate permease 0.26 MMP_RS03565 uracil phosphoribosyltransferase low > 25
Methanococcus maripaludis JJ 0.45 MMJJ_RS02280 sulfate permease 0.26 MMJJ_RS01490 uracil phosphoribosyltransferase low > 28
Bacteroides stercoris CC31F 0.45 HMPREF1181_RS01835 sulfate permease 0.19 HMPREF1181_RS01165 uracil phosphoribosyltransferase low > 56
Bacteroides ovatus ATCC 8483 0.45 BACOVA_02876 sulfate permease 0.22 BACOVA_02012 putative uracil phosphoribosyltransferase low > 94
Phocaeicola dorei CL03T12C01 0.44 ABI39_RS05845 sulfate permease 0.22 ABI39_RS06680 uracil phosphoribosyltransferase low > 72
Phocaeicola vulgatus CL09T03C04 0.44 HMPREF1058_RS11200 sulfate permease 0.21 HMPREF1058_RS10070 uracil phosphoribosyltransferase low > 67
Parabacteroides merdae CL09T00C40 0.44 HMPREF1078_RS06515 sulfate permease 0.22 HMPREF1078_RS00655 uracil phosphoribosyltransferase low > 61
Bacteroides thetaiotaomicron VPI-5482 0.42 BT3181 putative sulfate transporter, permease (NCBI ptt file) 0.21 BT2791 uracil phosphoribosyltransferase (NCBI ptt file) low > 81
Rhodospirillum rubrum S1H 0.40 Rru_A0164 Sulfate transporter/antisigma-factor antagonist (NCBI) 0.44 Rru_A2255 Uracil phosphoribosyl transferase (NCBI) low > 58
Dechlorosoma suillum PS 0.39 Dsui_1250 sulfate permease-like transporter, MFS superfamily 0.69 Dsui_2333 uracil phosphoribosyltransferase low > 51
Azospirillum sp. SherDot2 0.38 MPMX19_02770 C4-dicarboxylic acid transporter DauA 0.42 MPMX19_02205 Uracil phosphoribosyltransferase low > 112
Castellaniella sp019104865 MT123 0.38 ABCV34_RS08985 SulP family inorganic anion transporter 0.62 ABCV34_RS15380 uracil phosphoribosyltransferase low > 48
Vibrio cholerae E7946 ATCC 55056 0.38 CSW01_14410 sodium-independent anion transporter 0.72 CSW01_11345 uracil phosphoribosyltransferase low > 62
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS16025 sulfate transporter 0.53 RR42_RS30815 uracil phosphoribosyltransferase low > 128
Sinorhizobium meliloti 1021 0.36 SMc00476 transport transmembrane protein 0.49 SMc04121 uracil phosphoribosyltransferase low > 103
Acidovorax sp. GW101-3H11 0.36 Ac3H11_3820 Sulfate permease 0.50 Ac3H11_2428 Uracil phosphoribosyltransferase (EC 2.4.2.9) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF1211 Sulfate permease 0.48 GFF1179 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 90
Marinobacter adhaerens HP15 0.34 HP15_3240 sulfate permease family protein 0.68 HP15_2306 uracil phosphoribosyltransferase low > 73
Shewanella oneidensis MR-1 0.34 SO3553 sulfate permease family protein (NCBI ptt file) 0.69 SO2759 upp uracil phosphoribosyltransferase (NCBI ptt file) low > 76
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_10315 sulfate transporter 0.65 AO353_14855 uracil phosphoribosyltransferase low > 101
Shewanella sp. ANA-3 0.33 Shewana3_3154 putative sulfate transporter YchM (RefSeq) 0.70 Shewana3_2544 upp uracil phosphoribosyltransferase (RefSeq) low > 73
Pseudomonas stutzeri RCH2 0.33 Psest_3240 Sulfate permease and related transporters (MFS superfamily) 0.66 Psest_1120 uracil phosphoribosyltransferase low > 67
Variovorax sp. OAS795 0.32 ABID97_RS07465 SulP family inorganic anion transporter 0.49 ABID97_RS16850 uracil phosphoribosyltransferase low > 91
Klebsiella michiganensis M5al 0.32 BWI76_RS17465 C4-dicarboxylic acid transporter DauA 0.73 BWI76_RS20945 uracil phosphoribosyltransferase low > 92
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_2936 Putative sulfate permease 0.65 Pf1N1B4_2934 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 87
Pectobacterium carotovorum WPP14 0.32 HER17_RS09730 C4-dicarboxylic acid transporter DauA 0.71 HER17_RS15460 uracil phosphoribosyltransferase low > 75
Shewanella loihica PV-4 0.32 Shew_0497 putative sulfate transporter YchM (RefSeq) 0.69 Shew_1514 upp uracil phosphoribosyltransferase (RefSeq) low > 60
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_5239 Putative sulfate permease 0.66 Pf6N2E2_5235 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 103
Escherichia coli ECOR27 0.31 NOLOHH_20635 dauA C4-dicarboxylic acid transporter DauA 0.74 NOLOHH_13465 upp uracil phosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_16580 transporter 0.66 AO356_16565 uracil phosphoribosyltransferase low > 104
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF2781 Putative sulfate permease 0.73 GFF2171 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 78
Enterobacter asburiae PDN3 0.31 EX28DRAFT_0825 high affinity sulphate transporter 1 0.73 EX28DRAFT_0170 uracil phosphoribosyltransferase (EC 2.4.2.9) low > 76
Enterobacter sp. TBS_079 0.31 MPMX20_02641 C4-dicarboxylic acid transporter DauA 0.72 MPMX20_03352 Uracil phosphoribosyltransferase low > 85
Variovorax sp. SCN45 0.31 GFF2584 Sulfate permease 0.49 GFF324 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 127
Serratia liquefaciens MT49 0.30 IAI46_10305 C4-dicarboxylic acid transporter DauA 0.71 IAI46_18880 uracil phosphoribosyltransferase low > 86
Pseudomonas sp. RS175 0.30 PFR28_03638 C4-dicarboxylic acid transporter DauA 0.66 PFR28_03641 Uracil phosphoribosyltransferase low > 88
Escherichia coli ECRC99 0.30 KEDOAH_25420 dauA C4-dicarboxylic acid transporter DauA 0.74 KEDOAH_06405 upp uracil phosphoribosyltransferase — —
Escherichia coli ECOR38 0.30 HEPCGN_24890 dauA C4-dicarboxylic acid transporter DauA 0.74 HEPCGN_20980 upp uracil phosphoribosyltransferase low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.30 OHPLBJKB_02481 C4-dicarboxylic acid transporter DauA 0.74 OHPLBJKB_01228 Uracil phosphoribosyltransferase low > 73
Escherichia coli ECRC102 0.30 NIAGMN_27810 dauA C4-dicarboxylic acid transporter DauA 0.74 NIAGMN_19585 upp uracil phosphoribosyltransferase — —
Escherichia coli ECRC101 0.30 OKFHMN_28425 dauA C4-dicarboxylic acid transporter DauA 0.74 OKFHMN_21815 upp uracil phosphoribosyltransferase — —
Escherichia coli ECRC101 0.30 MCAODC_21835 dauA C4-dicarboxylic acid transporter DauA 0.74 MCAODC_12345 upp uracil phosphoribosyltransferase — —
Escherichia coli ECRC98 0.30 JDDGAC_06150 dauA C4-dicarboxylic acid transporter DauA 0.74 JDDGAC_25760 upp uracil phosphoribosyltransferase — —
Escherichia coli ECRC62 0.30 BNILDI_18790 dauA C4-dicarboxylic acid transporter DauA 0.74 BNILDI_12275 upp uracil phosphoribosyltransferase — —
Escherichia coli BL21 0.30 ECD_01181 C4-dicarboxylic acid transporter 0.74 ECD_02390 uracil phosphoribosyltransferase low > 60
Escherichia fergusonii Becca 0.30 EFB2_02721 C4-dicarboxylic acid transporter DauA 0.74 EFB2_01400 Uracil phosphoribosyltransferase 0.35 55
Escherichia coli BW25113 0.30 b1206 ychM orf, hypothetical protein (VIMSS) 0.74 b2498 upp uracil phosphoribosyltransferase (VIMSS) low > 76
Dickeya dadantii 3937 0.30 DDA3937_RS12220 C4-dicarboxylic acid transporter DauA 0.73 DDA3937_RS06030 uracil phosphoribosyltransferase low > 74
Escherichia coli Nissle 1917 0.30 ECOLIN_RS07295 C4-dicarboxylic acid transporter DauA 0.74 ECOLIN_RS14185 uracil phosphoribosyltransferase — —
Dickeya dianthicola 67-19 0.30 HGI48_RS12310 C4-dicarboxylic acid transporter DauA 0.72 HGI48_RS06075 uracil phosphoribosyltransferase low > 71
Dickeya dianthicola ME23 0.30 DZA65_RS12750 C4-dicarboxylic acid transporter DauA 0.73 DZA65_RS06425 uracil phosphoribosyltransferase low > 75
Rahnella sp. WP5 0.29 EX31_RS07290 C4-dicarboxylic acid transporter DauA 0.70 EX31_RS22700 uracil phosphoribosyltransferase low > 89
Shewanella amazonensis SB2B 0.28 Sama_1067 putative sulfate transporter YchM (RefSeq) 0.69 Sama_2096 upp uracil phosphoribosyltransferase (RefSeq) low > 62
Paraburkholderia bryophila 376MFSha3.1 0.25 H281DRAFT_01715 sulfate permease, SulP family 0.43 H281DRAFT_04523 uracil phosphoribosyltransferase low > 103
Alteromonas macleodii MIT1002 0.20 MIT1002_01122 Bicarbonate transporter BicA 0.69 MIT1002_02893 Uracil phosphoribosyltransferase low > 70
Phaeobacter inhibens DSM 17395 0.18 PGA1_c06390 putative sulfate transporter 0.52 PGA1_c11960 uracil phosphoribosyltransferase Upp low > 62
Acinetobacter radioresistens SK82 0.17 MPMX26_03168 Bicarbonate transporter BicA 0.62 MPMX26_02542 Uracil phosphoribosyltransferase low > 36
Rhizobium sp. OAE497 0.17 ABIE40_RS06660 SulP family inorganic anion transporter 0.52 ABIE40_RS00825 uracil phosphoribosyltransferase 0.40 64
Mucilaginibacter yixingensis YX-36 DSM 26809 0.17 ABZR88_RS17870 SulP family inorganic anion transporter 0.19 ABZR88_RS00770 uracil phosphoribosyltransferase low > 71
Pseudomonas syringae pv. syringae B728a 0.17 Psyr_3086 Sulfate transporter/antisigma-factor antagonist STAS:Sulphate transporter 0.66 Psyr_0969 uracil phosphoribosyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.17 Psyr_3086 Sulfate transporter/antisigma-factor antagonist STAS:Sulphate transporter 0.66 Psyr_0969 uracil phosphoribosyltransferase low > 86
Pontibacter actiniarum KMM 6156, DSM 19842 0.17 CA264_14595 sodium-independent anion transporter 0.24 CA264_14760 uracil phosphoribosyltransferase low > 74
Pantoea sp. MT58 0.17 IAI47_21130 SulP family inorganic anion transporter 0.72 IAI47_05185 uracil phosphoribosyltransferase low > 76
Dinoroseobacter shibae DFL-12 0.17 Dshi_2067 sulphate transporter (RefSeq) 0.55 Dshi_0831 uracil phosphoribosyltransferase (RefSeq) low > 64
Xanthomonas campestris pv. campestris strain 8004 0.16 Xcc-8004.821.1 Sulfate permease 0.62 Xcc-8004.2160.1 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.16 CA265_RS24540 sodium-independent anion transporter 0.18 CA265_RS19460 uracil phosphoribosyltransferase low > 88
Agrobacterium fabrum C58 0.16 Atu1156 sulfate permease 0.50 Atu0135 uracil phosphoribosyltransferase low > 89
Paraburkholderia sabiae LMG 24235 0.16 QEN71_RS12990 SulP family inorganic anion transporter 0.44 QEN71_RS24390 uracil phosphoribosyltransferase low > 153
Burkholderia phytofirmans PsJN 0.16 BPHYT_RS22120 sulfate transporter 0.43 BPHYT_RS06415 uracil phosphoribosyltransferase low > 109
Pseudomonas sp. S08-1 0.16 OH686_05645 Sulfate permease 0.68 OH686_17985 uracil phosphoribosyltransferase low > 80
Echinicola vietnamensis KMM 6221, DSM 17526 0.15 Echvi_3031 Sulfate permease and related transporters (MFS superfamily) 0.23 Echvi_0597 Uracil phosphoribosyltransferase low > 79
Bosea sp. OAE506 0.15 ABIE41_RS20915 SulP family inorganic anion transporter 0.51 ABIE41_RS22700 uracil phosphoribosyltransferase low > 77
Pseudomonas fluorescens GW456-L13 0.15 PfGW456L13_5136 Sulfate permease 0.64 PfGW456L13_1597 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 87
Pseudomonas simiae WCS417 0.15 PS417_23615 sulfate transporter 0.66 PS417_04435 uracil phosphoribosyltransferase low > 88
Herbaspirillum seropedicae SmR1 0.15 HSERO_RS01545 sulfate transporter 0.44 HSERO_RS03500 uracil phosphoribosyltransferase low > 78
Pseudomonas putida KT2440 0.15 PP_4112 Sulphate transporter 0.66 PP_0746 Uracil phosphoribosyltransferase low > 96
Paraburkholderia graminis OAS925 0.13 ABIE53_001581 MFS superfamily sulfate permease-like transporter 0.43 ABIE53_001547 uracil phosphoribosyltransferase low > 113
Erwinia tracheiphila SCR3 0.10 LU632_RS02400 SulP family inorganic anion transporter 0.71 LU632_RS08280 upp uracil phosphoribosyltransferase low > 74

Not shown: 4 genomes with orthologs for DvMF_1575 only; 19 genomes with orthologs for DvMF_0911 only