Conservation of cofitness between Shew_2934 and Shew_2185 in Shewanella loihica PV-4

77 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_2934 SPOUT methyltransferase superfamily protein (RefSeq) 1.0 Shew_2185 septum site-determining protein MinD (RefSeq) 0.59 11
Shewanella amazonensis SB2B 0.94 Sama_2587 rRNA large subunit methyltransferase (RefSeq) 0.90 Sama_1931 septum site-determining protein MinD (RefSeq) low > 62
Shewanella sp. ANA-3 0.93 Shewana3_0996 rRNA large subunit methyltransferase (RefSeq) 0.89 Shewana3_2383 septum site-determining protein MinD (RefSeq) low > 73
Shewanella oneidensis MR-1 0.93 SO1169 conserved hypothetical protein TIGR00246 (NCBI ptt file) 0.89 SO2577 minD septum site-determining protein MinD (NCBI ptt file) low > 76
Pantoea sp. MT58 0.82 IAI47_14020 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.77 IAI47_08850 septum site-determining protein MinD low > 76
Erwinia tracheiphila SCR3 0.82 LU632_RS16370 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.78 LU632_RS13120 minD septum site-determining protein MinD low > 74
Escherichia coli BL21 0.81 ECD_00605 23S rRNA m(3)Psi1915 pseudouridine methyltransferase, SAM-dependent 0.79 ECD_01150 inhibitor of FtsZ ring polymerization; chromosome-membrane tethering protein; membrane ATPase of the MinCDEE system — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.81 OHPLBJKB_03070 Ribosomal RNA large subunit methyltransferase H 0.79 OHPLBJKB_02516 Septum site-determining protein MinD — —
Escherichia coli Nissle 1917 0.81 ECOLIN_RS03465 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.79 ECOLIN_RS07115 septum site-determining protein MinD — —
Vibrio cholerae E7946 ATCC 55056 0.81 CSW01_04865 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.80 CSW01_09790 septum site-determining protein MinD low > 62
Dickeya dianthicola 67-19 0.81 HGI48_RS06220 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.78 HGI48_RS11245 septum site-determining protein MinD — —
Escherichia coli BW25113 0.81 b0636 ybeA hypothetical protein (NCBI) 0.79 b1175 minD membrane ATPase of the MinC-MinD-MinE system (NCBI) low > 76
Escherichia coli ECRC99 0.81 KEDOAH_20610 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.79 KEDOAH_25225 minD septum site-determining protein MinD — —
Escherichia coli ECRC102 0.81 NIAGMN_05415 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.79 NIAGMN_28010 minD septum site-determining protein MinD — —
Escherichia coli ECOR38 0.81 HEPCGN_00915 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.79 HEPCGN_24665 minD septum site-determining protein MinD — —
Escherichia coli ECRC98 0.81 JDDGAC_11005 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.79 JDDGAC_06300 minD septum site-determining protein MinD — —
Pectobacterium carotovorum WPP14 0.81 HER17_RS15240 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.78 HER17_RS11260 septum site-determining protein MinD low > 75
Escherichia coli ECRC101 0.81 MCAODC_26575 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.79 MCAODC_21960 minD septum site-determining protein MinD — —
Escherichia coli ECRC62 0.81 BNILDI_21745 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.79 BNILDI_18965 minD septum site-determining protein MinD — —
Escherichia fergusonii Becca 0.81 EFB2_03456 Ribosomal RNA large subunit methyltransferase H 0.79 EFB2_02756 Septum site-determining protein MinD low > 86
Escherichia coli ECRC101 0.81 OKFHMN_07360 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.79 OKFHMN_28210 minD septum site-determining protein MinD — —
Escherichia coli ECOR27 0.81 NOLOHH_23735 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.79 NOLOHH_20805 minD septum site-determining protein MinD — —
Dickeya dianthicola ME23 0.80 DZA65_RS06565 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.78 DZA65_RS11590 septum site-determining protein MinD low > 75
Dickeya dadantii 3937 0.80 DDA3937_RS06175 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.77 DDA3937_RS11210 septum site-determining protein MinD — —
Serratia liquefaciens MT49 0.80 IAI46_05935 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.79 IAI46_14520 septum site-determining protein MinD low > 86
Rahnella sp. WP5 0.80 EX31_RS23125 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.80 EX31_RS10585 septum site-determining protein MinD low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.80 GFF4549 LSU m3Psi1915 methyltransferase RlmH 0.79 GFF2817 Septum site-determining protein MinD — —
Enterobacter asburiae PDN3 0.79 EX28DRAFT_2327 rRNA large subunit m3Psi methyltransferase RlmH 0.77 EX28DRAFT_0757 septum site-determining protein MinD — —
Enterobacter sp. TBS_079 0.79 MPMX20_01295 Ribosomal RNA large subunit methyltransferase H 0.78 MPMX20_02708 Septum site-determining protein MinD low > 85
Klebsiella michiganensis M5al 0.79 BWI76_RS08040 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.78 BWI76_RS17785 septum site-determining protein MinD low > 92
Alteromonas macleodii MIT1002 0.76 MIT1002_01852 Ribosomal RNA large subunit methyltransferase H 0.82 MIT1002_03165 Cell division inhibitor MinD — —
Marinobacter adhaerens HP15 0.61 HP15_604 conserved hypothetical protein CHP00246 0.79 HP15_733 cell division inhibitor MinD low > 73
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_4366 Protein of unknown function DUF163 0.79 Psyr_1612 septum site-determining protein MinD — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_4366 Protein of unknown function DUF163 0.79 Psyr_1612 septum site-determining protein MinD low > 86
Pseudomonas putida KT2440 0.60 PP_4808 23S rRNA m3psi1915 methyltransferase 0.80 PP_1733 membrane ATPase of the MinC-MinD-MinE system low > 96
Pseudomonas simiae WCS417 0.60 PS417_24730 50S rRNA methyltransferase 0.81 PS417_19465 cell division inhibitor MinD — —
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS26660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.81 PFLU_RS21435 septum site-determining protein MinD — —
Pseudomonas fluorescens SBW25 0.60 PFLU_RS26660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.81 PFLU_RS21435 septum site-determining protein MinD — —
Pseudomonas sp. RS175 0.60 PFR28_03869 Ribosomal RNA large subunit methyltransferase H 0.79 PFR28_03152 Septum site-determining protein MinD — —
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_2691 LSU m3Psi1915 methyltransferase RlmH 0.79 Pf1N1B4_3755 Septum site-determining protein MinD — —
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_4996 LSU m3Psi1915 methyltransferase RlmH 0.75 Pf6N2E2_5796 Septum site-determining protein MinD — —
Pseudomonas fluorescens FW300-N2C3 0.59 AO356_15305 50S rRNA methyltransferase 0.79 AO356_19415 septum site-determining protein MinD — —
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_06480 50S rRNA methyltransferase 0.78 AO353_02375 septum site-determining protein MinD — —
Pseudomonas fluorescens GW456-L13 0.59 PfGW456L13_1359 LSU m3Psi1915 methyltransferase RlmH 0.77 PfGW456L13_4192 Septum site-determining protein MinD — —
Pseudomonas sp. S08-1 0.59 OH686_09325 rRNA large subunit m3Psi methyltransferase RlmH 0.81 OH686_19770 septum site-determining protein MinD low > 80
Pseudomonas stutzeri RCH2 0.57 Psest_0511 rRNA large subunit m3Psi methyltransferase RlmH 0.79 Psest_2946 septum site-determining protein MinD low > 67
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_09750 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.72 OKGIIK_03305 minD septum site-determining protein MinD — —
Dyella japonica UNC79MFTsu3.2 0.53 ABZR86_RS09055 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.72 ABZR86_RS21355 septum site-determining protein MinD low > 74
Rhodanobacter denitrificans MT42 0.52 LRK55_RS02450 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.73 LRK55_RS14175 septum site-determining protein MinD — —
Rhodanobacter denitrificans FW104-10B01 0.52 LRK54_RS02695 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.72 LRK54_RS14460 septum site-determining protein MinD low > 59
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS24420 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.71 QEN71_RS03520 septum site-determining protein MinD low > 153
Acinetobacter radioresistens SK82 0.50 MPMX26_02301 Ribosomal RNA large subunit methyltransferase H 0.69 MPMX26_02421 Septum site-determining protein MinD low > 36
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS06385 ribosomal RNA large subunit methyltransferase H 0.70 BPHYT_RS05165 cell division inhibitor MinD — —
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS17780 50S rRNA methyltransferase 0.74 HSERO_RS21345 cell division inhibitor MinD low > 78
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS04710 50S rRNA methyltransferase 0.72 RR42_RS00455 cell division inhibitor MinD low > 128
Paraburkholderia graminis OAS925 0.49 ABIE53_001541 23S rRNA (pseudouridine1915-N3)-methyltransferase 0.70 ABIE53_001299 septum site-determining protein MinD — —
Ralstonia solanacearum PSI07 0.49 RPSI07_RS13660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.72 RPSI07_RS08220 septum site-determining protein MinD low > 81
Ralstonia solanacearum GMI1000 0.49 RS_RS11015 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.72 RS_RS16860 septum site-determining protein MinD — —
Lysobacter sp. OAE881 0.49 ABIE51_RS06755 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.74 ABIE51_RS14610 septum site-determining protein MinD low > 62
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_04517 23S rRNA (pseudouridine1915-N3)-methyltransferase 0.70 H281DRAFT_00186 septum site-determining protein MinD low > 103
Castellaniella sp019104865 MT123 0.48 ABCV34_RS02530 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.72 ABCV34_RS08020 septum site-determining protein MinD — —
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS15430 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.74 ABZR87_RS04340 septum site-determining protein MinD low > 80
Ralstonia solanacearum UW163 0.48 UW163_RS10105 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.72 UW163_RS04545 septum site-determining protein MinD — —
Acidovorax sp. GW101-3H11 0.48 Ac3H11_2418 LSU m3Psi1915 methyltransferase RlmH 0.71 Ac3H11_4858 Septum site-determining protein MinD low > 79
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS03565 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.72 RALBFv3_RS09050 septum site-determining protein MinD low > 76
Variovorax sp. OAS795 0.46 ABID97_RS16715 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.74 ABID97_RS03000 septum site-determining protein MinD low > 91
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.1876.1 LSU m3Psi1915 methyltransferase RlmH 0.69 Xcc-8004.3863.1 Septum site-determining protein MinD — —
Variovorax sp. SCN45 0.46 GFF298 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase (EC 2.1.1.177) 0.73 GFF3366 Septum site-determining protein MinD low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF4529 LSU m3Psi1915 methyltransferase RlmH 0.71 GFF2057 Septum site-determining protein MinD low > 90
Dechlorosoma suillum PS 0.44 Dsui_0451 hypothetical protein 0.72 Dsui_3459 septum site-determining protein MinD low > 51
Methanococcus maripaludis S2 0.33 MMP_RS05365 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.18 MMP_RS05910 cell division ATPase MinD low > 25
Methanococcus maripaludis JJ 0.33 MMJJ_RS09010 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.18 MMJJ_RS08445 cell division ATPase MinD low > 28
Rhizobium sp. OAE497 0.29 ABIE40_RS18965 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.60 ABIE40_RS22875 septum site-determining protein MinD low > 107
Azospirillum brasilense Sp245 0.28 AZOBR_RS04060 50S rRNA methyltransferase 0.77 AZOBR_RS05345 cell division inhibitor MinD — —
Fusobacterium nucleatum SB010 0.27 HUW76_07715 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.43 HUW76_02365 septum site-determining protein MinD low > 35
Azospirillum sp. SherDot2 0.26 MPMX19_01940 Ribosomal RNA large subunit methyltransferase H 0.78 MPMX19_00564 Septum site-determining protein MinD — —
Sinorhizobium meliloti 1021 0.24 SMc03781 rRNA large subunit methyltransferase 0.62 SM_b21523 cell division inhibitor protein low > 103
Bosea sp. OAE506 0.20 ABIE41_RS07565 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.58 ABIE41_RS01340 septum site-determining protein MinD low > 77

Not shown: 17 genomes with orthologs for Shew_2934 only; 2 genomes with orthologs for Shew_2185 only