| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Bacteroides thetaiotaomicron VPI-5482 | 1.0 | BT2387 | | O-acetylhomoserine (thiol)-lyase (NCBI ptt file) | 1.0 | BT0156 | | transcriptional regulator (NCBI ptt file) | 0.78 | 20 |
| Bacteroides ovatus ATCC 8483 | 0.97 | BACOVA_03030 | | O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | 0.92 | BACOVA_01281 | | transcriptional regulator, LuxR family | low | > 94 |
| Phocaeicola vulgatus CL09T03C04 | 0.93 | HMPREF1058_RS17635 | | O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | 0.44 | HMPREF1058_RS02885 | | response regulator transcription factor | 0.63 | 10 |
| Phocaeicola dorei CL03T12C01 | 0.92 | ABI39_RS13825 | | O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | 0.45 | ABI39_RS02195 | | response regulator transcription factor | low | > 72 |
| Bacteroides stercoris CC31F | 0.88 | HMPREF1181_RS05290 | | O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | 0.85 | HMPREF1181_RS05280 | | response regulator transcription factor | low | > 56 |
| Dechlorosoma suillum PS | 0.57 | Dsui_2241 | | OAH/OAS sulfhydrylase | 0.16 | Dsui_1862 | | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | low | > 51 |
| Pseudomonas sp. S08-1 | 0.56 | OH686_09845 | | O-acetylhomoserine sulfhydrylase or O-succinylhomoserine sulfhydrylase | 0.18 | OH686_21830 | | Two-component transcriptional response regulator, NarL/FixJ family | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.56 | ABZR87_RS17575 | | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | 0.22 | ABZR87_RS06400 | | response regulator transcription factor | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.56 | Psest_3685 | | OAH/OAS sulfhydrylase | 0.18 | Psest_0662 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | low | > 67 |
| Variovorax sp. OAS795 | 0.56 | ABID97_RS15510 | | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | 0.16 | ABID97_RS12700 | | response regulator transcription factor | low | > 91 |
| Rhizobium sp. OAE497 | 0.56 | ABIE40_RS07005 | | O-acetylhomoserine aminocarboxypropyltransferase | 0.15 | ABIE40_RS27605 | | response regulator transcription factor | low | > 107 |
| Pseudomonas putida KT2440 | 0.55 | PP_2528 | | O-acetylhomoserine (thiol)-lyase | 0.19 | PP_2126 | | DNA-binding response regulator, LuxR family | low | > 96 |
| Acidovorax sp. GW101-3H11 | 0.55 | Ac3H11_549 | | O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) | 0.15 | Ac3H11_3852 | | DNA-binding response regulator, LuxR family | — | — |
| Azospirillum brasilense Sp245 | 0.55 | AZOBR_RS11340 | | O-acetylhomoserine aminocarboxypropyltransferase | 0.13 | AZOBR_RS10280 | | transcriptional regulator | low | > 97 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.55 | GFF5041 | | O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) | 0.19 | GFF2789 | | DNA-binding response regulator, LuxR family | low | > 90 |
| Azospirillum sp. SherDot2 | 0.54 | MPMX19_00422 | | O-acetyl-L-homoserine sulfhydrylase | 0.13 | MPMX19_01247 | | Transcriptional regulatory protein DegU | low | > 112 |
| Cupriavidus basilensis FW507-4G11 | 0.54 | RR42_RS32610 | | O-acetylhomoserine aminocarboxypropyltransferase | 0.21 | RR42_RS00785 | | LuxR family transcriptional regulator | low | > 128 |
| Herbaspirillum seropedicae SmR1 | 0.54 | HSERO_RS18310 | | O-acetylhomoserine aminocarboxypropyltransferase | 0.19 | HSERO_RS12850 | | LuxR family transcriptional regulator | low | > 78 |
| Agrobacterium fabrum C58 | 0.53 | Atu1251 | | O-acetylhomoserine sulfhydrylase | 0.14 | Atu5267 | | two component response regulator | — | — |
| Mycobacterium tuberculosis H37Rv | 0.53 | Rv3340 | | Probable O-acetylhomoserine sulfhydrylase MetC (homocysteine synthase) (O-acetylhomoserine (thiol)-lyase) (OAH sulfhydrylase) (O-acetyl-L-homoserine sulfhydrylase) | 0.16 | Rv0844c | | Possible nitrate/nitrite response transcriptional regulatory protein NarL | low | > 58 |
| Pseudomonas fluorescens SBW25 | 0.52 | PFLU_RS02250 | | O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | 0.17 | PFLU_RS21600 | | response regulator transcription factor | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.52 | PFLU_RS02250 | | O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | 0.17 | PFLU_RS21600 | | response regulator transcription factor | low | > 109 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.52 | Xcc-8004.1385.1 | | O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) | 0.16 | Xcc-8004.2612.1 | | BarA-associated response regulator UvrY (= GacA = SirA) | low | > 74 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.51 | Echvi_3411 | | OAH/OAS sulfhydrylase | 0.19 | Echvi_1897 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | low | > 79 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.51 | CA264_02370 | | O-acetylhomoserine aminocarboxypropyltransferase | 0.21 | CA264_01935 | | DNA-binding response regulator | low | > 74 |
| Dickeya dianthicola 67-19 | 0.51 | HGI48_RS15890 | | O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | 0.15 | HGI48_RS02840 | | transcriptional regulator UhpA | low | > 71 |
| Dickeya dianthicola ME23 | 0.51 | DZA65_RS16970 | | O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | 0.15 | DZA65_RS03015 | | transcriptional regulator UhpA | low | > 75 |
| Paraburkholderia sabiae LMG 24235 | 0.51 | QEN71_RS05200 | | O-acetylhomoserine aminocarboxypropyltransferase | 0.18 | QEN71_RS05525 | | response regulator transcription factor | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.51 | BPHYT_RS13720 | | O-acetylhomoserine aminocarboxypropyltransferase | 0.19 | BPHYT_RS30900 | | transcriptional regulator | 0.20 | 75 |
| Pectobacterium carotovorum WPP14 | 0.51 | HER17_RS17585 | | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | 0.14 | HER17_RS07710 | | UvrY/SirA/GacA family response regulator transcription factor | low | > 75 |
| Ralstonia solanacearum UW163 | 0.50 | UW163_RS15180 | | O-acetylhomoserine aminocarboxypropyltransferase | 0.23 | UW163_RS02980 | | DNA-binding response regulator | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.50 | RALBFv3_RS01870 | | O-acetylhomoserine aminocarboxypropyltransferase | 0.23 | RALBFv3_RS10600 | | DNA-binding response regulator | 0.67 | 13 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.50 | CA265_RS08180 | | O-acetylhomoserine aminocarboxypropyltransferase | 0.15 | CA265_RS06355 | | DNA-binding response regulator | low | > 88 |
| Ralstonia solanacearum PSI07 | 0.50 | RPSI07_RS15620 | | O-acetylhomoserine aminocarboxypropyltransferase | 0.23 | RPSI07_RS22720 | | DNA-binding response regulator | low | > 81 |
| Paraburkholderia graminis OAS925 | 0.50 | ABIE53_002919 | | O-acetylhomoserine (thiol)-lyase | 0.17 | ABIE53_004191 | | DNA-binding NarL/FixJ family response regulator | low | > 113 |
| Ralstonia solanacearum GMI1000 | 0.50 | RS_RS07865 | | O-acetylhomoserine aminocarboxypropyltransferase | 0.23 | RS_RS01435 | | DNA-binding response regulator | low | > 80 |
| Shewanella loihica PV-4 | 0.49 | Shew_2710 | | O-acetylhomoserine/O-acetylserine sulfhydrylase (RefSeq) | 0.14 | Shew_1824 | | response regulator (RefSeq) | — | — |
| Shewanella sp. ANA-3 | 0.47 | Shewana3_0930 | | O-acetylhomoserine/O-acetylserine sulfhydrylase (RefSeq) | 0.15 | Shewana3_1608 | | response regulator (RefSeq) | low | > 73 |
| Magnetospirillum magneticum AMB-1 | 0.47 | AMB_RS12895 | | O-acetylhomoserine aminocarboxypropyltransferase | 0.16 | AMB_RS18540 | | DNA-binding response regulator | low | > 64 |
| Shewanella oneidensis MR-1 | 0.47 | SO1095 | | O-acetylhomoserine (thiol)-lyase, putative (NCBI ptt file) | 0.15 | SO1860 | | DNA-binding response regulator, LuxR family (NCBI ptt file) | low | > 76 |
| Phaeobacter inhibens DSM 17395 | 0.45 | PGA1_c07640 | | O-acetylhomoserine / O-acetylserine sulfhydrylase | 0.20 | PGA1_c20200 | | two-component signal transduction system, response regulator | low | > 62 |
| Dinoroseobacter shibae DFL-12 | 0.45 | Dshi_0793 | | O-acetylhomoserine/O-acetylserine sulfhydrylase (RefSeq) | 0.21 | Dshi_2345 | | two component transcriptional regulator, LuxR family (RefSeq) | low | > 64 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.35 | Psyr_1669 | | O-succinylhomoserine sulfhydrylase | 0.16 | Psyr_1940 | | regulatory protein, LuxR:Response regulator receiver | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.35 | Psyr_1669 | | O-succinylhomoserine sulfhydrylase | 0.16 | Psyr_1940 | | regulatory protein, LuxR:Response regulator receiver | — | — |
| Kangiella aquimarina DSM 16071 | 0.34 | B158DRAFT_1522 | | methionine gamma-lyase | 0.18 | B158DRAFT_1737 | | two component transcriptional regulator, LuxR family | low | > 40 |
| Pseudomonas simiae WCS417 | 0.34 | PS417_18530 | | O-succinylhomoserine sulfhydrylase | 0.17 | PS417_19630 | | LuxR family transcriptional regulator | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.34 | AO356_21470 | | O-succinylhomoserine sulfhydrylase | 0.18 | AO356_02965 | | LuxR family transcriptional regulator | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.34 | Pf6N2E2_77 | | O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) | 0.18 | Pf6N2E2_2418 | | DNA-binding response regulator, LuxR family | low | > 103 |
| Pseudomonas sp. RS175 | 0.34 | PFR28_02810 | | O-succinylhomoserine sulfhydrylase | 0.18 | PFR28_01009 | | Transcriptional regulatory protein DegU | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.33 | AO353_20695 | | O-succinylhomoserine sulfhydrylase | 0.18 | AO353_19270 | | LuxR family transcriptional regulator | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.33 | PfGW456L13_3934 | | O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) | 0.17 | PfGW456L13_2277 | | DNA-binding response regulator, LuxR family | low | > 87 |
| Shewanella amazonensis SB2B | 0.33 | Sama_1242 | | methionine gamma-lyase (RefSeq) | 0.14 | Sama_1873 | | response regulator receiver protein (RefSeq) | low | > 62 |
| Serratia liquefaciens MT49 | 0.33 | IAI46_03630 | | methionine gamma-lyase | 0.15 | IAI46_18680 | | two-component system response regulator NarL | low | > 86 |
| Rahnella sp. WP5 | 0.32 | EX31_RS04985 | | PLP-dependent transferase | 0.14 | EX31_RS24145 | | UvrY/SirA/GacA family response regulator transcription factor | low | > 89 |
| Dyella japonica UNC79MFTsu3.2 | 0.30 | ABZR86_RS18745 | | PLP-dependent aspartate aminotransferase family protein | 0.16 | ABZR86_RS21335 | | response regulator transcription factor | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.29 | LRK54_RS05660 | | PLP-dependent aspartate aminotransferase family protein | 0.16 | LRK54_RS14480 | | response regulator transcription factor | low | > 59 |
| Rhodanobacter sp. FW510-T8 | 0.29 | OKGIIK_01180 | metC | cystathionine beta-lyase | 0.15 | OKGIIK_03330 | citB | DNA-binding response regulator | low | > 52 |
| Pseudomonas fluorescens FW300-N1B4 | 0.29 | Pf1N1B4_4890 | | Cystathionine gamma-lyase (EC 4.4.1.1) | 0.17 | Pf1N1B4_5052 | | Two-component response regulator | — | — |
| Rhodanobacter denitrificans MT42 | 0.29 | LRK55_RS05410 | | cystathionine gamma-synthase | 0.16 | LRK55_RS14195 | | response regulator transcription factor | — | — |
| Lysobacter sp. OAE881 | 0.28 | ABIE51_RS04295 | | cystathionine gamma-synthase | 0.18 | ABIE51_RS10620 | | response regulator transcription factor | low | > 62 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.28 | ABZR88_RS06685 | | cystathionine gamma-synthase | 0.12 | ABZR88_RS08650 | | response regulator transcription factor | low | > 71 |
| Klebsiella michiganensis M5al | 0.28 | BWI76_RS16730 | | cystathionine gamma-lyase | 0.16 | BWI76_RS18335 | | DNA-binding response regulator | low | > 92 |
| Alteromonas macleodii MIT1002 | 0.26 | MIT1002_02266 | | Methionine gamma-lyase | 0.15 | MIT1002_03526 | | Nitrogen regulation protein C | low | > 70 |
| Enterobacter asburiae PDN3 | 0.25 | EX28DRAFT_1678 | | Cystathionine beta-lyases/cystathionine gamma-synthases | 0.14 | EX28DRAFT_0633 | | two component transcriptional regulator, LuxR family | low | > 76 |
| Enterobacter sp. TBS_079 | 0.25 | MPMX20_01953 | | Cystathionine beta-lyase | 0.14 | MPMX20_01114 | | Putative transcriptional regulator | low | > 85 |
| Vibrio cholerae E7946 ATCC 55056 | 0.23 | CSW01_13550 | | O-succinylhomoserine (thiol)-lyase | 0.17 | CSW01_06455 | | DNA-binding response regulator | low | > 62 |
| Dickeya dadantii 3937 | 0.23 | DDA3937_RS00950 | | cystathionine gamma-synthase | 0.15 | DDA3937_RS13705 | | UvrY/SirA/GacA family response regulator transcription factor | low | > 74 |
| Escherichia coli ECOR38 | 0.23 | HEPCGN_21950 | | cystathionine gamma-synthase | 0.16 | HEPCGN_06415 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | low | > 85 |
| Erwinia tracheiphila SCR3 | 0.22 | LU632_RS19640 | metB | cystathionine gamma-synthase | 0.14 | LU632_RS10190 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.22 | GFF2323 | | Cystathionine gamma-synthase (EC 2.5.1.48) | 0.16 | GFF4454 | | Transcriptional regulator of fimbriae expression FimZ (LuxR/UhpA family) | low | > 78 |
| Escherichia coli Nissle 1917 | 0.22 | ECOLIN_RS22725 | | cystathionine gamma-synthase | 0.15 | ECOLIN_RS21160 | | transcriptional regulator UhpA | low | > 52 |
| Pantoea sp. MT58 | 0.21 | IAI47_00880 | | cystathionine gamma-synthase | 0.15 | IAI47_05315 | | response regulator | low | > 76 |
| Escherichia coli ECRC102 | 0.21 | NIAGMN_11430 | metB | cystathionine gamma-synthase | 0.16 | NIAGMN_05830 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | — | — |
| Escherichia coli ECRC99 | 0.21 | KEDOAH_14485 | metB | cystathionine gamma-synthase | 0.16 | KEDOAH_20195 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | — | — |
| Escherichia fergusonii Becca | 0.21 | EFB2_04679 | | Cystathionine gamma-synthase | 0.15 | EFB2_00029 | | Transcriptional regulatory protein UhpA | low | > 86 |
| Escherichia coli ECRC98 | 0.21 | JDDGAC_17300 | metB | cystathionine gamma-synthase | 0.16 | JDDGAC_11425 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | — | — |
| Escherichia coli ECRC101 | 0.21 | MCAODC_04175 | metB | cystathionine gamma-synthase | 0.16 | MCAODC_26995 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | — | — |
| Escherichia coli ECRC101 | 0.21 | OKFHMN_13675 | metB | cystathionine gamma-synthase | 0.16 | OKFHMN_07775 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.21 | OHPLBJKB_04111 | | Cystathionine gamma-synthase | 0.15 | OHPLBJKB_03146 | | Virulence factors putative positive transcription regulator BvgA | low | > 73 |
| Escherichia coli ECOR27 | 0.21 | NOLOHH_05820 | metB | cystathionine gamma-synthase | 0.16 | NOLOHH_00760 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | — | — |
| Escherichia coli BW25113 | 0.21 | b3939 | metB | cystathionine gamma-synthase (NCBI) | 0.16 | b0535 | fimZ | predicted DNA-binding transcriptional regulator (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 0.21 | BNILDI_05715 | metB | cystathionine gamma-synthase | 0.16 | BNILDI_22195 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | — | — |
| Escherichia coli BL21 | 0.21 | ECD_03825 | | cystathionine gamma-synthase, PLP-dependent | 0.15 | ECD_00485 | | response regulator family protein | — | — |
Not shown: 16 genomes with orthologs for BT2387 only; 0 genomes with orthologs for BT0156 only