Conservation of cofitness between b2518 and b0912 in Escherichia coli BW25113

80 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2518 ndk nucleoside diphosphate kinase (NCBI) 1.0 b0912 ihfB integration host factor subunit beta (NCBI) 0.34 15
Escherichia coli ECRC102 1.00 NIAGMN_19475 ndk nucleoside-diphosphate kinase 1.00 NIAGMN_03185 ihfB integration host factor subunit beta
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01191 Nucleoside diphosphate kinase 1.00 OHPLBJKB_02756 Integration host factor subunit beta
Escherichia coli BL21 1.00 ECD_02410 multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase 1.00 ECD_00916 integration host factor (IHF), DNA-binding protein, beta subunit
Escherichia coli ECOR27 1.00 NOLOHH_13355 ndk nucleoside-diphosphate kinase 1.00 NOLOHH_22025 ihfB integration host factor subunit beta
Escherichia coli ECRC101 1.00 OKFHMN_21705 ndk nucleoside-diphosphate kinase 1.00 OKFHMN_05465 ihfB integration host factor subunit beta
Escherichia coli ECRC62 1.00 BNILDI_12155 ndk nucleoside-diphosphate kinase 1.00 BNILDI_20280 ihfB integration host factor subunit beta
Escherichia coli ECRC99 1.00 KEDOAH_06515 ndk nucleoside-diphosphate kinase 1.00 KEDOAH_22270 ihfB integration host factor subunit beta
Escherichia coli ECRC98 1.00 JDDGAC_25380 ndk nucleoside-diphosphate kinase 1.00 JDDGAC_09075 ihfB integration host factor subunit beta
Escherichia coli ECRC101 1.00 MCAODC_12235 ndk nucleoside-diphosphate kinase 1.00 MCAODC_24855 ihfB integration host factor subunit beta
Escherichia coli ECOR38 0.99 HEPCGN_20825 ndk nucleoside-diphosphate kinase 1.00 HEPCGN_23060 ihfB integration host factor subunit beta
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14305 nucleoside-diphosphate kinase 1.00 ECOLIN_RS04830 integration host factor subunit beta
Escherichia fergusonii Becca 0.99 EFB2_01372 Nucleoside diphosphate kinase 1.00 EFB2_03152 Integration host factor subunit beta
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF2415 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.99 GFF3669 Integration host factor beta subunit low > 78
Klebsiella michiganensis M5al 0.96 BWI76_RS21100 nucleoside-diphosphate kinase 0.97 BWI76_RS09785 integration host factor subunit beta
Enterobacter sp. TBS_079 0.95 MPMX20_03396 Nucleoside diphosphate kinase 0.97 MPMX20_01570 Integration host factor subunit beta low > 85
Enterobacter asburiae PDN3 0.95 EX28DRAFT_0125 nucleoside diphosphate kinase (EC 2.7.4.6) 0.97 EX28DRAFT_2024 integration host factor, beta subunit
Erwinia tracheiphila SCR3 0.91 LU632_RS17820 ndk nucleoside-diphosphate kinase 0.94 LU632_RS09810 ihfB integration host factor subunit beta
Pantoea sp. MT58 0.90 IAI47_05035 nucleoside-diphosphate kinase 0.95 IAI47_12845 integration host factor subunit beta
Dickeya dadantii 3937 0.81 DDA3937_RS15485 nucleoside-diphosphate kinase 0.92 DDA3937_RS09690 integration host factor subunit beta
Dickeya dianthicola 67-19 0.81 HGI48_RS15595 nucleoside-diphosphate kinase 0.91 HGI48_RS09700 integration host factor subunit beta
Serratia liquefaciens MT49 0.81 IAI46_19295 nucleoside-diphosphate kinase 0.94 IAI46_08655 integration host factor subunit beta
Dickeya dianthicola ME23 0.80 DZA65_RS16670 nucleoside-diphosphate kinase 0.91 DZA65_RS10010 integration host factor subunit beta
Pectobacterium carotovorum WPP14 0.80 HER17_RS06080 nucleoside-diphosphate kinase 0.94 HER17_RS12270 integration host factor subunit beta
Rahnella sp. WP5 0.79 EX31_RS20530 nucleoside-diphosphate kinase 0.93 EX31_RS18235 integration host factor subunit beta
Alteromonas macleodii MIT1002 0.74 MIT1002_02793 Nucleoside diphosphate kinase 0.77 MIT1002_02188 Integration host factor subunit beta
Kangiella aquimarina DSM 16071 0.73 B158DRAFT_1148 nucleoside diphosphate kinase (EC 2.7.4.6) 0.70 B158DRAFT_2328 integration host factor, beta subunit
Shewanella sp. ANA-3 0.73 Shewana3_2272 nucleoside diphosphate kinase (RefSeq) 0.79 Shewana3_1978 ihfB integration host factor subunit beta (RefSeq)
Shewanella loihica PV-4 0.72 Shew_2310 nucleoside-diphosphate kinase (RefSeq) 0.79 Shew_1955 integration host factor, beta subunit (RefSeq)
Shewanella oneidensis MR-1 0.71 SO2274 ndk nucleoside diphosphate kinase (NCBI ptt file) 0.79 SO2401 ihfB integration host factor, beta subunit (NCBI ptt file)
Acinetobacter radioresistens SK82 0.71 MPMX26_00425 Nucleoside diphosphate kinase 0.59 MPMX26_01237 Integration host factor subunit beta
Shewanella amazonensis SB2B 0.71 Sama_1301 ndk nucleoside diphosphate kinase (RefSeq) 0.81 Sama_1737 ihfB integration host factor subunit beta (RefSeq)
Marinobacter adhaerens HP15 0.70 HP15_1489 nucleoside diphosphate kinase 0.69 HP15_1367 integration host factor, beta subunit
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_03925 nucleoside-diphosphate kinase 0.83 CSW01_09575 integration host factor subunit beta
Pseudomonas sp. S08-1 0.66 OH686_17510 Nucleoside diphosphate kinase 0.73 OH686_20895 integration host factor, beta subunit
Pseudomonas stutzeri RCH2 0.65 Psest_1258 Nucleoside diphosphate kinase 0.74 Psest_1805 integration host factor, beta subunit
Xanthomonas campestris pv. campestris strain 8004 0.65 Xcc-8004.2738.1 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.66 Xcc-8004.2382.1 Integration host factor beta subunit
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS00065 nucleoside-diphosphate kinase 0.67 LRK54_RS18040 integration host factor subunit beta
Rhodanobacter denitrificans MT42 0.64 LRK55_RS18060 nucleoside-diphosphate kinase 0.67 LRK55_RS17895 integration host factor subunit beta
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_07145 ndk nucleoside-diphosphate kinase 0.68 OKGIIK_07260 ihfB integration host factor subunit beta
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS05460 nucleoside-diphosphate kinase 0.67 ABZR86_RS05560 integration host factor subunit beta
Pseudomonas putida KT2440 0.64 PP_0849 Nucleoside diphosphate kinase 0.73 PP_1773 Integration host factor subunit beta
Paraburkholderia graminis OAS925 0.64 ABIE53_002745 nucleoside-diphosphate kinase 0.56 ABIE53_003151 integration host factor subunit beta
Pseudomonas fluorescens FW300-N2C3 0.63 AO356_06610 nucleoside diphosphate kinase 0.73 AO356_03435 integration host factor subunit beta
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_3182 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.73 Pf6N2E2_2515 Integration host factor beta subunit
Paraburkholderia bryophila 376MFSha3.1 0.63 H281DRAFT_00513 nucleoside diphosphate kinase 0.56 H281DRAFT_03919 integration host factor subunit beta
Burkholderia phytofirmans PsJN 0.63 BPHYT_RS12595 nucleoside diphosphate kinase 0.55 BPHYT_RS14880 integration host factor subunit beta
Lysobacter sp. OAE881 0.63 ABIE51_RS09410 nucleoside-diphosphate kinase 0.66 ABIE51_RS09350 integration host factor subunit beta
Pseudomonas sp. RS175 0.63 PFR28_00293 Nucleoside diphosphate kinase 0.73 PFR28_00913 Integration host factor subunit beta
Pseudomonas fluorescens FW300-N2E3 0.62 AO353_15870 nucleoside diphosphate kinase 0.73 AO353_02040 integration host factor subunit beta
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_4866 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.73 PfGW456L13_2181 Integration host factor beta subunit
Pseudomonas fluorescens FW300-N1B4 0.62 Pf1N1B4_858 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.73 Pf1N1B4_345 Integration host factor beta subunit
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_1244 nucleoside diphosphate kinase 0.73 Psyr_3641 Integration host factor, beta subunit
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_1244 nucleoside diphosphate kinase 0.73 Psyr_3641 Integration host factor, beta subunit
Pseudomonas simiae WCS417 0.61 PS417_23165 nucleoside diphosphate kinase 0.73 PS417_08155 integration host factor subunit beta
Pseudomonas fluorescens SBW25 0.61 PFLU_RS24820 nucleoside-diphosphate kinase 0.73 PFLU_RS08125 integration host factor subunit beta low > 109
Pseudomonas fluorescens SBW25-INTG 0.61 PFLU_RS24820 nucleoside-diphosphate kinase 0.73 PFLU_RS08125 integration host factor subunit beta
Variovorax sp. OAS795 0.61 ABID97_RS14205 nucleoside-diphosphate kinase 0.51 ABID97_RS09495 integration host factor subunit beta
Variovorax sp. SCN45 0.61 GFF991 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.51 GFF6178 Integration host factor beta subunit
Paraburkholderia sabiae LMG 24235 0.60 QEN71_RS05960 nucleoside-diphosphate kinase 0.55 QEN71_RS04100 integration host factor subunit beta
Rhodospirillum rubrum S1H 0.60 Rru_A2169 Nucleoside-diphosphate kinase (NCBI) 0.49 Rru_A0292 Integration host factor, beta subunit (NCBI)
Dechlorosoma suillum PS 0.59 Dsui_3146 nucleoside diphosphate kinase 0.62 Dsui_1944 integration host factor, beta subunit
Desulfovibrio vulgaris Miyazaki F 0.59 DvMF_3160 Nucleoside-diphosphate kinase (RefSeq) 0.41 DvMF_0558 histone family protein DNA-binding protein (RefSeq)
Desulfovibrio vulgaris Hildenborough JW710 0.58 DVU2333 ndk nucleoside diphosphate kinase (TIGR) 0.41 DVU1864 ihfB DNA-binding protein HU, beta subunit, putative (TIGR)
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS14815 nucleoside diphosphate kinase 0.58 HSERO_RS18405 integration host factor subunit beta
Sphingomonas koreensis DSMZ 15582 0.57 Ga0059261_0873 nucleoside diphosphate kinase (EC 2.7.4.6) 0.47 Ga0059261_3896 integration host factor, beta subunit
Phaeobacter inhibens DSM 17395 0.57 PGA1_c19750 nucleoside diphosphate kinase Ndk 0.49 PGA1_c04840 integration host factor subunit beta
Hydrogenophaga sp. GW460-11-11-14-LB1 0.56 GFF4867 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.50 GFF5347 Integration host factor beta subunit
Magnetospirillum magneticum AMB-1 0.56 AMB_RS18020 nucleoside-diphosphate kinase 0.54 AMB_RS20265 integration host factor subunit beta
Dinoroseobacter shibae DFL-12 0.55 Dshi_1350 Nucleoside-diphosphate kinase (RefSeq) 0.48 Dshi_1027 integration host factor, beta subunit (RefSeq)
Azospirillum brasilense Sp245 0.54 AZOBR_RS16305 nucleoside diphosphate kinase 0.51 AZOBR_RS03110 integration host factor subunit beta
Sinorhizobium meliloti 1021 0.54 SMc00595 nucleoside diphosphate kinase 0.51 SMc01134 integration host factor subunit beta
Agrobacterium fabrum C58 0.54 Atu1122 nucleoside diphosphate kinase 0.49 Atu0338 integration host factor, beta subunit
Azospirillum sp. SherDot2 0.54 MPMX19_01455 Nucleoside diphosphate kinase 0.50 MPMX19_02383 Integration host factor subunit beta
Rhodopseudomonas palustris CGA009 0.52 TX73_015810 nucleoside-diphosphate kinase 0.49 TX73_000345 integration host factor subunit beta
Rhizobium sp. OAE497 0.52 ABIE40_RS06465 nucleoside-diphosphate kinase 0.50 ABIE40_RS01835 integration host factor subunit beta
Bosea sp. OAE506 0.51 ABIE41_RS17075 nucleoside-diphosphate kinase 0.52 ABIE41_RS00295 integration host factor subunit beta
Brevundimonas sp. GW460-12-10-14-LB2 0.48 A4249_RS08235 nucleoside-diphosphate kinase 0.51 A4249_RS10895 integration host factor subunit beta
Caulobacter crescentus NA1000 Δfur 0.48 CCNA_01770 nucleoside diphosphate kinase 0.51 CCNA_03701 integration host factor beta-subunit
Caulobacter crescentus NA1000 0.48 CCNA_01770 nucleoside diphosphate kinase 0.51 CCNA_03701 integration host factor beta-subunit
Echinicola vietnamensis KMM 6221, DSM 17526 0.45 Echvi_0995 Nucleoside diphosphate kinase 0.29 Echvi_1249 Bacterial nucleoid DNA-binding protein

Not shown: 19 genomes with orthologs for b2518 only; 1 genomes with orthologs for b0912 only