Conservation of cofitness between b0907 and b0004 in Escherichia coli BW25113

76 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0907 serC phosphoserine aminotransferase (NCBI) 1.0 b0004 thrC threonine synthase (NCBI) 0.94 3
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02761 Phosphoserine aminotransferase 1.00 OHPLBJKB_03656 Threonine synthase — —
Escherichia coli BL21 1.00 ECD_00911 3-phosphoserine/phosphohydroxythreonine aminotransferase 1.00 ECD_00004 L-threonine synthase 0.68 15
Escherichia coli ECRC62 1.00 BNILDI_20305 serC 3-phosphoserine/phosphohydroxythreonine transaminase 1.00 BNILDI_08170 thrC threonine synthase — —
Escherichia coli ECRC102 1.00 NIAGMN_03210 serC 3-phosphoserine/phosphohydroxythreonine transaminase 1.00 NIAGMN_08950 thrC threonine synthase — —
Escherichia coli ECRC98 1.00 JDDGAC_09100 serC 3-phosphoserine/phosphohydroxythreonine transaminase 1.00 JDDGAC_14695 thrC threonine synthase — —
Escherichia coli ECOR27 1.00 NOLOHH_22050 serC 3-phosphoserine/phosphohydroxythreonine transaminase 1.00 NOLOHH_03430 thrC threonine synthase low > 57
Escherichia coli ECRC101 1.00 MCAODC_24880 serC 3-phosphoserine/phosphohydroxythreonine transaminase 1.00 MCAODC_01615 thrC threonine synthase — —
Escherichia coli ECRC101 1.00 OKFHMN_05490 serC 3-phosphoserine/phosphohydroxythreonine transaminase 1.00 OKFHMN_11100 thrC threonine synthase — —
Escherichia coli ECRC99 1.00 KEDOAH_22245 serC 3-phosphoserine/phosphohydroxythreonine transaminase 1.00 KEDOAH_17055 thrC threonine synthase — —
Escherichia coli ECOR38 0.99 HEPCGN_23030 serC 3-phosphoserine/phosphohydroxythreonine transaminase 0.99 HEPCGN_09105 thrC threonine synthase low > 85
Escherichia coli Nissle 1917 0.99 ECOLIN_RS04805 3-phosphoserine/phosphohydroxythreonine transaminase 0.99 ECOLIN_RS00020 threonine synthase low > 52
Escherichia fergusonii Becca 0.99 EFB2_03157 Phosphoserine aminotransferase 1.00 EFB2_04039 Threonine synthase low > 86
Enterobacter sp. TBS_079 0.93 MPMX20_01566 Phosphoserine aminotransferase 0.93 MPMX20_00712 Threonine synthase 0.94 3
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF3664 Phosphoserine aminotransferase (EC 2.6.1.52) 0.91 GFF1080 Threonine synthase (EC 4.2.3.1) low > 78
Enterobacter asburiae PDN3 0.91 EX28DRAFT_2028 phosphoserine aminotransferase apoenzyme (EC 2.6.1.52) 0.93 EX28DRAFT_3616 threonine synthase — —
Klebsiella michiganensis M5al 0.89 BWI76_RS09755 phosphoserine transaminase 0.92 BWI76_RS04255 threonine synthase 0.87 5
Pantoea sp. MT58 0.82 IAI47_12865 3-phosphoserine/phosphohydroxythreonine transaminase 0.81 IAI47_16205 threonine synthase 0.88 11
Erwinia tracheiphila SCR3 0.81 LU632_RS09790 serC 3-phosphoserine/phosphohydroxythreonine transaminase 0.79 LU632_RS02620 thrC threonine synthase — —
Dickeya dadantii 3937 0.81 DDA3937_RS09670 3-phosphoserine/phosphohydroxythreonine transaminase 0.80 DDA3937_RS18405 threonine synthase 0.73 4
Pectobacterium carotovorum WPP14 0.80 HER17_RS12290 3-phosphoserine/phosphohydroxythreonine transaminase 0.79 HER17_RS02805 threonine synthase — —
Dickeya dianthicola 67-19 0.80 HGI48_RS09680 3-phosphoserine/phosphohydroxythreonine transaminase 0.79 HGI48_RS18335 threonine synthase — —
Dickeya dianthicola ME23 0.79 DZA65_RS09990 3-phosphoserine/phosphohydroxythreonine transaminase 0.80 DZA65_RS19475 threonine synthase low > 75
Serratia liquefaciens MT49 0.79 IAI46_08635 3-phosphoserine/phosphohydroxythreonine transaminase 0.84 IAI46_03040 threonine synthase 0.72 26
Rahnella sp. WP5 0.79 EX31_RS18255 3-phosphoserine/phosphohydroxythreonine transaminase 0.85 EX31_RS03935 threonine synthase 0.67 33
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_05875 3-phosphoserine/phosphohydroxythreonine transaminase 0.68 CSW01_11965 threonine synthase — —
Alteromonas macleodii MIT1002 0.59 MIT1002_02192 Phosphoserine aminotransferase 0.65 MIT1002_03084 Threonine synthase — —
Shewanella sp. ANA-3 0.58 Shewana3_1973 phosphoserine aminotransferase (RefSeq) 0.56 Shewana3_1141 threonine synthase (RefSeq) — —
Pseudomonas stutzeri RCH2 0.57 Psest_1983 phosphoserine aminotransferase 0.28 Psest_3125 threonine synthase — —
Shewanella oneidensis MR-1 0.56 SO2410 serC phosphoserine aminotransferase (NCBI ptt file) 0.55 SO3413 thrC threonine synthase (NCBI ptt file) — —
Pseudomonas putida KT2440 0.56 PP_1768 phosphoserine aminotransferase 0.27 PP_1471 Threonine synthase — —
Pseudomonas sp. RS175 0.56 PFR28_00906 Phosphoserine aminotransferase 0.27 PFR28_00334 Threonine synthase — —
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_02075 3-phosphoserine/phosphohydroxythreonine aminotransferase 0.28 AO353_04350 threonine synthase — —
Shewanella amazonensis SB2B 0.56 Sama_1732 phosphoserine aminotransferase (RefSeq) 0.55 Sama_0907 threonine synthase (RefSeq) — —
Shewanella loihica PV-4 0.56 Shew_1950 phosphoserine aminotransferase (RefSeq) 0.58 Shew_1081 threonine synthase (RefSeq) — —
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_2175 Phosphoserine aminotransferase (EC 2.6.1.52) 0.27 PfGW456L13_1724 Threonine synthase (EC 4.2.3.1) — —
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_03470 3-phosphoserine/phosphohydroxythreonine aminotransferase 0.28 AO356_06370 threonine synthase — —
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_2521 Phosphoserine aminotransferase (EC 2.6.1.52) 0.28 Pf6N2E2_3142 Threonine synthase (EC 4.2.3.1) — —
Pseudomonas simiae WCS417 0.55 PS417_08120 MFS transporter 0.27 PS417_22880 threonine synthase — —
Pseudomonas sp. S08-1 0.55 OH686_20865 phosphoserine transaminase 0.27 OH686_17765 threonine synthase — —
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS14915 phosphoserine aminotransferase 0.21 BPHYT_RS08960 threonine synthase 0.59 81
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS08090 3-phosphoserine/phosphohydroxythreonine transaminase 0.27 PFLU_RS24545 threonine synthase — —
Paraburkholderia bryophila 376MFSha3.1 0.55 H281DRAFT_03926 phosphoserine aminotransferase apoenzyme 0.21 H281DRAFT_00811 L-threonine synthase — —
Pseudomonas fluorescens SBW25 0.55 PFLU_RS08090 3-phosphoserine/phosphohydroxythreonine transaminase 0.27 PFLU_RS24545 threonine synthase — —
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS18435 MFS transporter 0.22 HSERO_RS10470 threonine synthase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_3646 phosphoserine aminotransferase apoenzyme 0.28 Psyr_1291 L-threonine synthase — —
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_3646 phosphoserine aminotransferase apoenzyme 0.28 Psyr_1291 L-threonine synthase — —
Dechlorosoma suillum PS 0.54 Dsui_1939 phosphoserine aminotransferase 0.21 Dsui_2904 threonine synthase — —
Paraburkholderia sabiae LMG 24235 0.54 QEN71_RS04065 3-phosphoserine/phosphohydroxythreonine transaminase 0.21 QEN71_RS22400 threonine synthase 0.76 69
Lysobacter sp. OAE881 0.54 ABIE51_RS12150 3-phosphoserine/phosphohydroxythreonine transaminase 0.30 ABIE51_RS17530 threonine synthase 0.94 42
Ralstonia solanacearum UW163 0.52 UW163_RS16055 3-phosphoserine/phosphohydroxythreonine transaminase 0.20 UW163_RS13325 threonine synthase — —
Marinobacter adhaerens HP15 0.52 HP15_1361 phosphoserine aminotransferase 0.25 HP15_765 threonine synthase — —
Ralstonia solanacearum IBSBF1503 0.52 RALBFv3_RS13755 3-phosphoserine/phosphohydroxythreonine transaminase 0.20 RALBFv3_RS15880 threonine synthase — —
Rhodanobacter denitrificans MT42 0.52 LRK55_RS00140 3-phosphoserine/phosphohydroxythreonine transaminase 0.28 LRK55_RS09995 threonine synthase low > 63
Ralstonia solanacearum GMI1000 0.52 RS_RS04490 3-phosphoserine/phosphohydroxythreonine aminotransferase 0.21 RS_RS06660 threonine synthase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF5342 Phosphoserine aminotransferase (EC 2.6.1.52) 0.22 GFF3936 Threonine synthase (EC 4.2.3.1) — —
Rhodanobacter denitrificans FW104-10B01 0.52 LRK54_RS00400 3-phosphoserine/phosphohydroxythreonine transaminase 0.28 LRK54_RS10355 threonine synthase low > 59
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS02220 3-phosphoserine/phosphohydroxythreonine transaminase 0.28 ABZR86_RS15975 threonine synthase (EC 4.2.3.1) (from data) 0.96 9
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_06910 serC 3-phosphoserine/phosphohydroxythreonine transaminase 0.28 OKGIIK_13570 thrC threonine synthase low > 52
Ralstonia solanacearum PSI07 0.51 RPSI07_RS19715 3-phosphoserine/phosphohydroxythreonine transaminase 0.20 RPSI07_RS17485 threonine synthase — —
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS09445 3-phosphoserine/phosphohydroxythreonine transaminase 0.21 ABZR87_RS05865 threonine synthase low > 80
Acidovorax sp. GW101-3H11 0.50 Ac3H11_2573 Phosphoserine aminotransferase (EC 2.6.1.52) 0.22 Ac3H11_1505 Threonine synthase (EC 4.2.3.1) — —
Variovorax sp. SCN45 0.50 GFF6183 Phosphoserine aminotransferase (EC 2.6.1.52) 0.22 GFF2800 Threonine synthase (EC 4.2.3.1) — —
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS04455 MFS transporter 0.22 RR42_RS12535 threonine synthase — —
Castellaniella sp019104865 MT123 0.49 ABCV34_RS07115 3-phosphoserine/phosphohydroxythreonine transaminase 0.24 ABCV34_RS02300 threonine synthase — —
Xanthomonas campestris pv. campestris strain 8004 0.48 Xcc-8004.3283.1 Phosphoserine aminotransferase (EC 2.6.1.52) 0.31 Xcc-8004.2954.1 Threonine synthase (EC 4.2.3.1) 0.79 38
Variovorax sp. OAS795 0.46 ABID97_RS09520 3-phosphoserine/phosphohydroxythreonine transaminase 0.23 ABID97_RS25760 threonine synthase — —
Paraburkholderia graminis OAS925 0.46 ABIE53_003159 phosphoserine aminotransferase 0.22 ABIE53_002027 threonine synthase — —
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_351 Phosphoserine aminotransferase (EC 2.6.1.52) 0.27 Pf1N1B4_3014 Threonine synthase (EC 4.2.3.1) — —
Pedobacter sp. GW460-11-11-14-LB5 0.44 CA265_RS09005 phosphoserine transaminase 0.40 CA265_RS23465 threonine synthase — —
Bacteroides thetaiotaomicron VPI-5482 0.40 BT1153 phosphoserine aminotransferase (NCBI ptt file) 0.41 BT2401 threonine synthase (NCBI ptt file) 0.91 13
Mucilaginibacter yixingensis YX-36 DSM 26809 0.39 ABZR88_RS09230 3-phosphoserine/phosphohydroxythreonine transaminase 0.40 ABZR88_RS18960 threonine synthase — —
Bacteroides ovatus ATCC 8483 0.39 BACOVA_04029 phosphoserine transaminase 0.41 BACOVA_03023 threonine synthase 0.91 26
Bacteroides stercoris CC31F 0.39 HMPREF1181_RS16870 3-phosphoserine/phosphohydroxythreonine transaminase 0.41 HMPREF1181_RS00050 threonine synthase — —
Phocaeicola dorei CL03T12C01 0.38 ABI39_RS16905 3-phosphoserine/phosphohydroxythreonine transaminase 0.42 ABI39_RS10440 threonine synthase 0.86 16
Phocaeicola vulgatus CL09T03C04 0.38 HMPREF1058_RS04300 3-phosphoserine/phosphohydroxythreonine transaminase 0.42 HMPREF1058_RS14730 threonine synthase 0.89 5
Parabacteroides merdae CL09T00C40 0.38 HMPREF1078_RS15400 3-phosphoserine/phosphohydroxythreonine transaminase 0.40 HMPREF1078_RS10395 threonine synthase 0.98 3

Not shown: 3 genomes with orthologs for b0907 only; 17 genomes with orthologs for b0004 only