| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Sinorhizobium meliloti 1021 | SMa2163 | | AraC family transcriptional regulator | insig. | 100 | 100 |
| | Sinorhizobium meliloti 1021 | SM_b21336 | | AraC family transcriptional regulator | insig. | 28 | 92 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS18340 | | helix-turn-helix domain-containing protein | insig. | 35 | 47 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_26250 | | AraC family transcriptional regulator | insig. | 33 | 55 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1125 | | Transcriptional regulator, AraC family | insig. | 33 | 55 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02999 | | transcriptional regulator, AraC family | insig. | 31 | 80 |
| | Rhodopseudomonas palustris CGA009 | TX73_010875 | | AraC family transcriptional regulator | insig. | 31 | 60 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS25940 | | AraC family transcriptional regulator | insig. | 34 | 46 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS29955 | | AraC family transcriptional regulator | insig. | 30 | 80 |
| | Paraburkholderia graminis OAS925 | ABIE53_005062 | | AraC family transcriptional regulator | sig. | 29 | 80 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37420 | | AraC family transcriptional regulator | insig. | 28 | 58 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37540 | | AraC family transcriptional regulator | cofit | 30 | 52 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS34765 | | AraC family transcriptional regulator | insig. | 29 | 57 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_13545 | | AraC family transcriptional regulator | sig. | 29 | 57 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3186 | | Transcriptional regulator, AraC family | insig. | 37 | 44 |
| | Dinoroseobacter shibae DFL-12 | Dshi_3015 | | transcriptional regulator, AraC family (RefSeq) | insig. | 45 | 29 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS03730 | | AraC family transcriptional regulator | insig. | 29 | 57 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1563 | | Transcriptional regulator, AraC family | insig. | 33 | 42 |
| | Sinorhizobium meliloti 1021 | SMa0319 | | AraC family transcriptional regulator | insig. | 33 | 55 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00041 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 29 | 50 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_28650 | | AraC family transcriptional regulator | insig. | 37 | 44 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03396 | | AraC-type DNA-binding protein | insig. | 30 | 49 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS08390 | | GlxA family transcriptional regulator | insig. | 32 | 48 |
| | Pantoea sp. MT58 | IAI47_05640 | | helix-turn-helix transcriptional regulator | insig. | 40 | 36 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_23660 | | AraC family transcriptional regulator | insig. | 32 | 42 |
| | Enterobacter sp. TBS_079 | MPMX20_02552 | | HTH-type transcriptional activator RhaR | insig. | 33 | 54 |
| | Sinorhizobium meliloti 1021 | SMa1749 | | transcriptional regulator | insig. | 33 | 40 |
| | Azospirillum sp. SherDot2 | MPMX19_02871 | | HTH-type transcriptional activator RhaR | insig. | 42 | 34 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4154 | | Transcriptional regulator, AraC family | insig. | 36 | 47 |
| | Rhodopseudomonas palustris CGA009 | TX73_005540 | | AraC family transcriptional regulator | insig. | 32 | 48 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_23160 | | AraC family transcriptional regulator | insig. | 40 | 31 |
| | Rhodopseudomonas palustris CGA009 | TX73_006805 | | AraC family transcriptional regulator | insig. | 42 | 35 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS09900 | | two-component regulator propeller domain-containing protein | insig. | 34 | 34 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS19200 | | AraC family transcriptional regulator | insig. | 41 | 32 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS11895 | | AraC family transcriptional regulator | insig. | 39 | 33 |
| | Agrobacterium fabrum C58 | Atu4659 | | AraC family transcriptional regulator | strong | 36 | 34 |
| | Enterobacter sp. TBS_079 | MPMX20_02542 | | HTH-type transcriptional activator RhaR | insig. | 26 | 55 |
| | Serratia liquefaciens MT49 | IAI46_11980 | | helix-turn-helix transcriptional regulator | insig. | 37 | 32 |
| | Ralstonia solanacearum GMI1000 | RS_RS22710 | | AraC family transcriptional regulator | insig. | 30 | 86 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08780 | | hybrid sensor histidine kinase/response regulator transcription factor | insig. | 36 | 35 |
| | Xanthobacter sp. DMC5 | GFF1541 | | HTH-type transcriptional activator RhaR | insig. | 35 | 35 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS22565 | | AraC family transcriptional regulator | insig. | 30 | 47 |
| | Pseudomonas sp. DMC3 | GFF1896 | | HTH-type transcriptional activator RhaS | cofit | 42 | 38 |
| | Rhizobium sp. OAE497 | ABIE40_RS29585 | | GlxA family transcriptional regulator | insig. | 28 | 49 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS18275 | | AraC family transcriptional regulator | insig. | 41 | 31 |
| | Ralstonia solanacearum UW163 | UW163_RS20855 | | AraC family transcriptional regulator | insig. | 41 | 31 |
| | Dickeya dadantii 3937 | DDA3937_RS08700 | | helix-turn-helix domain-containing protein | insig. | 38 | 32 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS22395 | | AraC family transcriptional regulator | strong | 30 | 50 |
| | Azospirillum sp. SherDot2 | MPMX19_01511 | | HTH-type transcriptional activator RhaR | insig. | 38 | 33 |
| | Enterobacter sp. TBS_079 | MPMX20_02241 | | HTH-type transcriptional activator RhaS | sig. | 36 | 33 |
| | Pseudomonas simiae WCS417 | PS417_16110 | | AraC family transcriptional regulator | no data | 33 | 40 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03176 | | transcriptional regulator, AraC family with amidase-like domain | insig. | 30 | 50 |
| | Pseudomonas putida KT2440 | PP_4605 | | Transcriptional regulator, AraC family | insig. | 40 | 35 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_16915 | | AraC family transcriptional regulator | sig. | 36 | 48 |
| | Rhizobium sp. OAE497 | ABIE40_RS22540 | | AraC family transcriptional regulator | strong | 32 | 33 |
| | Paraburkholderia graminis OAS925 | ABIE53_004121 | | AraC family carnitine catabolism transcriptional activator | insig. | 30 | 51 |
| | Pseudomonas sp. BP01 | JOY50_RS15480 | | helix-turn-helix domain-containing protein | insig. | 39 | 36 |
| | Sinorhizobium meliloti 1021 | SM_b21649 | | AraC family transcriptional regulator | strong | 36 | 34 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4694 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | strong | 29 | 51 |
| | Pseudomonas stutzeri RCH2 | Psest_2061 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 33 | 45 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_04870 | | AraC family transcriptional regulator | strong | 40 | 38 |
| | Pseudomonas sp. DMC3 | GFF1052 | | HTH-type transcriptional activator RhaR | cofit | 36 | 38 |
| | Pseudomonas putida KT2440 | PP_0305 | | HTH-type transcriptional regulator CdhR | strong | 30 | 47 |
| | Rhizobium sp. OAE497 | ABIE40_RS20540 | | AraC family transcriptional regulator | sig. | 29 | 62 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS17030 | | AraC family transcriptional regulator | insig. | 35 | 37 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_07735 | | AraC family transcriptional regulator | strong | 28 | 52 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS30415 | | AraC family transcriptional regulator | insig. | 28 | 56 |
| | Variovorax sp. SCN45 | GFF3392 | | Transcriptional regulator, AraC family | insig. | 28 | 57 |
| | Pseudomonas segetis P6 | ACVTMO_RS03480 | | GlxA family transcriptional regulator | insig. | 31 | 45 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_13860 | | AraC family transcriptional regulator | strong | 28 | 52 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS25180 | | AraC family transcriptional regulator | insig. | 28 | 64 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_156 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | no data | 34 | 46 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02634 | | HTH-type transcriptional activator Btr | insig. | 34 | 31 |
| | Sinorhizobium meliloti 1021 | SMa1822 | | hypothetical protein | insig. | 27 | 54 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1007 | | Transcriptional regulator, AraC family | insig. | 39 | 38 |
| | Pseudomonas sp. RS175 | PFR28_01504 | | HTH-type transcriptional activator RhaR | insig. | 35 | 46 |
| | Pseudomonas orientalis W4I3 | QF045_RS13870 | | AraC family transcriptional regulator | insig. | 31 | 40 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS25210 | cdhR;inference=COORDINATES | HTH-type transcriptional regulator CdhR | sig. | 29 | 50 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_26485 | | AraC family transcriptional regulator | strong | 29 | 50 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS43520 | cdhR;inference=COORDINATES | HTH-type transcriptional regulator CdhR | insig. | 29 | 50 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS22610 | | AraC family transcriptional regulator | insig. | 25 | 66 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2369 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 34 | 46 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS18080 | | helix-turn-helix transcriptional regulator | insig. | 32 | 39 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS18080 | | helix-turn-helix transcriptional regulator | insig. | 32 | 39 |
| | Agrobacterium fabrum C58 | Atu0410 | | transcriptional regulator, AraC family | insig. | 30 | 47 |
| | Pseudomonas sp. RS175 | PFR28_04154 | | HTH-type transcriptional regulator CdhR | sig. | 28 | 51 |
| | Variovorax sp. SCN45 | GFF2336 | | Transcriptional regulator, AraC family | insig. | 40 | 36 |
| | Sinorhizobium meliloti 1021 | SMc01610 | | transcriptional regulator | insig. | 30 | 48 |
| | Azospirillum sp. SherDot2 | MPMX19_04709 | | HTH-type transcriptional regulator CdhR | insig. | 35 | 38 |
| | Pseudomonas sp. DMC3 | GFF123 | | HTH-type transcriptional regulator CdhR | insig. | 27 | 52 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03562 | | AraC family transcriptional regulator | insig. | 37 | 35 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS06080 | | response regulator transcription factor | insig. | 33 | 45 |
| | Bosea sp. OAE506 | ABIE41_RS16450 | | AraC family transcriptional regulator | insig. | 30 | 48 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_03190 | | AraC family transcriptional regulator | insig. | 28 | 60 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS05990 | | AraC family transcriptional regulator | insig. | 38 | 41 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS08765 | | AraC family transcriptional regulator | insig. | 28 | 60 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS44085 | | AraC family transcriptional regulator | insig. | 28 | 60 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2372 | | transcriptional regulator (NCBI ptt file) | sig. | 33 | 38 |
| | Pseudomonas simiae WCS417 | PS417_23415 | | AraC family transcriptional regulator | sig. | 39 | 32 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS27925 | | GlxA family transcriptional regulator | insig. | 28 | 51 |