Homologs of Pf6N2E2_4527 from Pseudomonas fluorescens FW300-N2E2

RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_4527		RNA polymerase sigma-70 factor, ECF subfamily	insig.	100	100
o	Pseudomonas simiae WCS417	PS417_03450		RNA polymerase sigma factor	insig.	54	86
o	Pseudomonas fluorescens SBW25	PFLU_RS03525		RNA polymerase sigma factor	insig.	51	92
o	Pseudomonas fluorescens SBW25-INTG	PFLU_RS03525		RNA polymerase sigma factor	insig.	51	92
o	Pseudomonas syringae pv. syringae B728a	Psyr_1217		Sigma-70 region 2:Sigma-70 region 4	strong	44	92
o	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_1217		Sigma-70 region 2:Sigma-70 region 4	cofit	44	92
o	Erwinia tracheiphila SCR3	LU632_RS03185		sigma-70 family RNA polymerase sigma factor	strong	39	98
o	Dickeya dadantii 3937	DDA3937_RS11655		sigma-70 family RNA polymerase sigma factor	insig.	44	82
o	Dickeya dianthicola 67-19	HGI48_RS11715		RNA polymerase sigma factor	insig.	44	82
o	Dickeya dianthicola ME23	DZA65_RS12200		RNA polymerase sigma factor	insig.	44	82
o	Pectobacterium carotovorum WPP14	HER17_RS10020		RNA polymerase sigma factor	insig.	41	82
	Herbaspirillum seropedicae SmR1	HSERO_RS03905		RNA polymerase subunit sigma-24	insig.	37	94
	Vibrio cholerae E7946 ATCC 55056	CSW01_12485		RNA polymerase sigma factor RpoE	no data	34	79
	Herbaspirillum seropedicae SmR1	HSERO_RS09625		RNA polymerase sigma factor RpoE	no data	33	80
	Dyella japonica UNC79MFTsu3.2	ABZR86_RS07180		RNA polymerase sigma factor RpoE	strong	31	80
	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_19215		RNA polymerase subunit sigma	sig.	35	79
	Rhodanobacter sp. FW510-T8	OKGIIK_07900	rpoE	RNA polymerase sigma factor RpoE	strong	31	80
	Lysobacter sp. OAE881	ABIE51_RS13890		RNA polymerase sigma factor RpoE	strong	32	80
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_0287		RNA polymerase sigma factor, sigma-70 family	strong	34	82
	Rhodanobacter denitrificans MT42	LRK55_RS16655		RNA polymerase sigma factor RpoE	no data	31	80
	Rhodanobacter denitrificans FW104-10B01	LRK54_RS16940		RNA polymerase sigma factor RpoE	strong	31	80
	Burkholderia phytofirmans PsJN	BPHYT_RS14405		RNA polymerase sigma factor RpoE	no data	30	80
	Paraburkholderia graminis OAS925	ABIE53_003043		RNA polymerase sigma-70 factor (ECF subfamily)	strong	30	80
	Alteromonas macleodii MIT1002	MIT1002_02719		Sigma-24	no data	32	83
	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_04355		RNA polymerase, sigma-24 subunit, RpoE	no data	30	80
	Paraburkholderia sabiae LMG 24235	QEN71_RS04575		RNA polymerase sigma factor RpoE	strong	30	80
	Cupriavidus basilensis FW507-4G11	RR42_RS14080		RNA polymerase sigma factor RpoE	strong	31	80
	Variovorax sp. OAS795	ABID97_RS08330		RNA polymerase sigma factor RpoE	strong	32	83
	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.3681.1		RNA polymerase sigma factor RpoE	insig.	31	80
	Castellaniella sp019104865 MT123	ABCV34_RS08355		RNA polymerase sigma factor RpoE	cofit	33	80
	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF329		RNA polymerase sigma-54 factor RpoN	insig.	33	85
	Erwinia tracheiphila SCR3	LU632_RS15425	rpoE	RNA polymerase sigma factor RpoE	strong	30	77
	Rahnella sp. WP5	EX31_RS21800		RNA polymerase sigma factor RpoE	no data	31	77
	Variovorax sp. SCN45	GFF3863		RNA polymerase sigma factor RpoE	insig.	31	83
	Acidovorax sp. GW101-3H11	Ac3H11_1573		RNA polymerase sigma factor RpoE	no data	30	83
	Dechlorosoma suillum PS	Dsui_2453		RNA polymerase sigma factor RpoE	no data	31	80
	Shewanella loihica PV-4	Shew_1048		RNA polymerase sigma factor RpoE (RefSeq)	cofit	30	79
	Pectobacterium carotovorum WPP14	HER17_RS05780		RNA polymerase sigma factor RpoE	no data	30	77
	Serratia liquefaciens MT49	IAI46_19585		RNA polymerase sigma factor RpoE	no data	32	77
	Marinobacter adhaerens HP15	HP15_775		RNA polymerase sigma-70 RpoE type	insig.	31	79
	Ralstonia sp. UNC404CL21Col	ABZR87_RS10165		RNA polymerase sigma factor RpoE	strong	29	80
	Kangiella aquimarina DSM 16071	B158DRAFT_2180		RNA polymerase, sigma-24 subunit, RpoE	strong	28	83
	Dickeya dianthicola 67-19	HGI48_RS15850		RNA polymerase sigma factor RpoE	cofit	30	77
	Dickeya dianthicola ME23	DZA65_RS16930		RNA polymerase sigma factor RpoE	strong	30	77
	Shewanella sp. ANA-3	Shewana3_3032		RNA polymerase sigma factor RpoE (RefSeq)	no data	30	83
	Pseudomonas stutzeri RCH2	Psest_3100		RNA polymerase sigma factor RpoE	strong	31	83
	Klebsiella michiganensis M5al	BWI76_RS21355		RNA polymerase sigma factor RpoE	no data	30	74
	Shewanella oneidensis MR-1	SO1342	rpoE	RNA polymerase sigma-24 factor (NCBI ptt file)	no data	30	83
	Magnetospirillum magneticum AMB-1	AMB_RS09285		RNA polymerase sigma factor	no data	33	78
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS16550		RNA polymerase sigma factor	strong	32	81
	Pseudomonas sp. S08-1	OH686_20045		RNA polymerase sigma factor RpoE	strong	31	83
	Ralstonia solanacearum IBSBF1503	RALBFv3_RS14445		RNA polymerase sigma factor RpoE	strong	30	80
	Ralstonia solanacearum GMI1000	RS_RS05225		RNA polymerase sigma factor RpoE	strong	30	80
	Ralstonia solanacearum PSI07	RPSI07_RS19015		RNA polymerase sigma factor RpoE	strong	30	80
	Ralstonia solanacearum UW163	UW163_RS11910		RNA polymerase sigma factor RpoE	insig.	30	80
	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF1465		RNA polymerase sigma factor RpoE	insig.	30	72
	Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	GFF2107		RNA polymerase sigma factor RpoE	no data	32	77
	Pseudomonas fluorescens SBW25	PFLU_RS07230		RNA polymerase sigma factor RpoE	sig.	29	83
	Pseudomonas fluorescens SBW25-INTG	PFLU_RS07230		RNA polymerase sigma factor RpoE	strong	29	83
	Pseudomonas sp. RS175	PFR28_00690		RNA polymerase sigma-H factor	strong	29	83
	Pseudomonas simiae WCS417	PS417_07120		RNA polymerase sigma-H factor	strong	29	83
	Pseudomonas fluorescens GW456-L13	PfGW456L13_4516		RNA polymerase sigma-H factor AlgT	sig.	29	83
	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_3323		RNA polymerase sigma-H factor AlgT	no data	29	83
	Pseudomonas fluorescens FW300-N2E3	AO353_17625		RNA polymerase subunit sigma	strong	29	83
	Pseudomonas fluorescens FW300-N2C3	AO356_04575		RNA polymerase subunit sigma	strong	29	83
	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_2756		RNA polymerase sigma-H factor AlgT	strong	29	83
	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF3339		RNA polymerase sigma factor RpoE	cofit	28	86
	Escherichia coli BL21	ECD_02467		RNA polymerase sigma E factor	no data	32	77
	Escherichia fergusonii Becca	EFB2_01323		ECF RNA polymerase sigma-E factor	no data	32	77
	Escherichia coli ECOR27	NOLOHH_13050	rpoE	RNA polymerase sigma factor RpoE	no data	32	77
	Escherichia coli ECOR38	HEPCGN_20520	rpoE	RNA polymerase sigma factor RpoE	no data	32	77
	Escherichia coli ECRC101	OKFHMN_21375	rpoE	RNA polymerase sigma factor RpoE	no data	32	77
	Escherichia coli ECRC101	MCAODC_11905	rpoE	RNA polymerase sigma factor RpoE	no data	32	77
	Escherichia coli ECRC102	NIAGMN_19145	rpoE	RNA polymerase sigma factor RpoE	no data	32	77
	Escherichia coli ECRC62	BNILDI_11850	rpoE	RNA polymerase sigma factor RpoE	no data	32	77
	Escherichia coli ECRC98	JDDGAC_25040	rpoE	RNA polymerase sigma factor RpoE	no data	32	77
	Escherichia coli ECRC99	KEDOAH_06845	rpoE	RNA polymerase sigma factor RpoE	no data	32	77
	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_01134		ECF RNA polymerase sigma-E factor	no data	32	77
	Escherichia coli Nissle 1917	ECOLIN_RS14560		RNA polymerase sigma factor RpoE	no data	32	77
	Escherichia coli BW25113	b2573	rpoE	RNA polymerase, sigma 24 (sigma E) factor (NCBI)	no data	32	77
	Dickeya dadantii 3937	DDA3937_RS15765		RNA polymerase sigma factor RpoE	strong	30	77
	Pseudomonas putida KT2440	PP_1427		RNA polymerase sigma E factor	sig.	29	83
	Rhizobium sp. OAE497	ABIE40_RS20320		sigma-70 family RNA polymerase sigma factor	insig.	29	85
	Paraburkholderia sabiae LMG 24235	QEN71_RS00095		RNA polymerase sigma factor	insig.	32	85
	Enterobacter asburiae PDN3	EX28DRAFT_0072		RNA polymerase sigma factor RpoE	no data	32	77
	Enterobacter sp. TBS_079	MPMX20_03444		ECF RNA polymerase sigma-E factor	no data	32	77
	Dinoroseobacter shibae DFL-12	Dshi_3423		RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq)	insig.	27	80
	Ralstonia solanacearum GMI1000	RS_RS14950		RNA polymerase sigma factor	no data	34	83
	Pseudomonas syringae pv. syringae B728a	Psyr_3958		RNA polymerase, sigma-24 subunit, RpoE	strong	30	83
	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_3958		RNA polymerase, sigma-24 subunit, RpoE	strong	30	83
	Pantoea sp. MT58	IAI47_04850		RNA polymerase sigma factor RpoE	no data	31	77
	Bosea sp. OAE506	ABIE41_RS04095		sigma-70 family RNA polymerase sigma factor	strong	31	79
	Azospirillum brasilense Sp245	AZOBR_RS06360		RNA polymerase subunit sigma-24	no data	30	83
	Bacteroides thetaiotaomicron VPI-5482	BT1572		RNA polymerase ECF-type sigma factor (NCBI ptt file)	insig.	31	83
	Bacteroides stercoris CC31F	HMPREF1181_RS16950		RNA polymerase sigma factor	strong	29	86
	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_06547		RNA polymerase sigma-70 factor, ECF subfamily	insig.	32	83
	Agrobacterium fabrum C58	Atu4160		RNA polymerase sigma factor	strong	32	79
	Agrobacterium fabrum C58	Atu2030		ECF family sigma factor	insig.	36	74
	Rhodopseudomonas palustris CGA009	TX73_021900		sigma-70 family RNA polymerase sigma factor	strong	30	81
	Azospirillum sp. SherDot2	MPMX19_00764		ECF RNA polymerase sigma factor EcfG	insig.	30	83