Homologs of OH686_23810 from Pseudomonas sp. S08-1

Uncharacterized RNA methyltransferase YsgA
SEED: FIG011178: rRNA methylase
KEGG: RNA methyltransferase, TrmH family

95 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas sp. S08-1 OH686_23810 Uncharacterized RNA methyltransferase YsgA insig. 100 100
o Pseudomonas stutzeri RCH2 Psest_1344 rRNA methylases sig. 82 100
o Marinobacter adhaerens HP15 HP15_3616 tRNA/rRNA methyltransferase (SpoU) sig. 70 100
o Alteromonas macleodii MIT1002 MIT1002_02899 23S rRNA (guanosine-2'-O-)-methyltransferase insig. 58 100
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS13975 RNA methyltransferase sig. 31 98
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12025 RNA methyltransferase cofit 30 98
o Vibrio cholerae E7946 ATCC 55056 CSW01_04150 RNA methyltransferase cofit 31 100
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3716 rRNA methylases insig. 34 95
o Mycobacterium tuberculosis H37Rv Rv1644 Possible 23S rRNA methyltransferase TsnR sig. 33 97
  Synechococcus elongatus PCC 7942 Synpcc7942_1199 probable tRNA/rRNA methyltransferase sig. 32 93
  Herbaspirillum seropedicae SmR1 HSERO_RS10950 RNA methyltransferase insig. 34 74
o Bacteroides stercoris CC31F HMPREF1181_RS14605 RNA methyltransferase insig. 31 98
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05700 RNA methyltransferase sig. 30 98
o Dechlorosoma suillum PS Dsui_2679 rRNA methylase strong 30 96
o Acinetobacter radioresistens SK82 MPMX26_02198 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB insig. 28 97
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS14990 RNA methyltransferase insig. 30 98
o Agrobacterium fabrum C58 Atu0341 rRNA methylase no data 31 99
o Variovorax sp. OAS795 ABID97_RS17095 RNA methyltransferase no data 32 98
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS01645 RNA methyltransferase sig. 31 85
o Ralstonia sp. UNC404CL21Col ABZR87_RS11900 RNA methyltransferase insig. 28 95
  Castellaniella sp019104865 MT123 ABCV34_RS04035 RNA methyltransferase cofit 34 74
o Bacteroides ovatus ATCC 8483 BACOVA_02546 RNA methyltransferase, TrmH family insig. 31 98
o Bacteroides thetaiotaomicron VPI-5482 BT0811 putative tRNA/rRNA methyltransferase (NCBI ptt file) strong 32 98
o Acidovorax sp. GW101-3H11 Ac3H11_433 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) insig. 30 97
o Phocaeicola dorei CL03T12C01 ABI39_RS15420 RNA methyltransferase insig. 31 85
o Rhizobium sp. OAE497 ABIE40_RS01810 RNA methyltransferase insig. 29 99
o Sinorhizobium meliloti 1021 SMc01130 tRNA/rRNA methyltransferase no data 29 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS06495 RNA methyltransferase insig. 29 96
o Variovorax sp. SCN45 GFF378 RNA (nucleoside 2'-O)-methyltransferase insig. 31 98
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4900 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) no data 32 94
  Paraburkholderia graminis OAS925 ABIE53_002488 TrmH family RNA methyltransferase sig. 30 70
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS00450 RNA methyltransferase no data 27 74
  Ralstonia solanacearum UW163 UW163_RS13780 RNA methyltransferase no data 27 74
  Ralstonia solanacearum GMI1000 RS_RS07120 RNA methyltransferase no data 27 74
  Cupriavidus basilensis FW507-4G11 RR42_RS11800 RNA methyltransferase insig. 30 66
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0920 rRNA methylases strong 29 97
o Caulobacter crescentus NA1000 CCNA_01245 23S rRNA methyltransferase sig. 28 98
o Caulobacter crescentus NA1000 Δfur CCNA_01245 23S rRNA methyltransferase insig. 28 98
  Ralstonia solanacearum PSI07 RPSI07_RS17025 RNA methyltransferase insig. 26 74
  Burkholderia phytofirmans PsJN BPHYT_RS12065 RNA methyltransferase insig. 30 70
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00625 RNA methyltransferase, TrmH family insig. 31 65
o Bifidobacterium breve UCC2003 BBR_RS13865 RNA methyltransferase sig. 28 98
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS05435 RNA methyltransferase no data 29 96
  Azospirillum brasilense Sp245 AZOBR_RS16105 RNA methyltransferase strong 30 54
  Azospirillum sp. SherDot2 MPMX19_01597 23S rRNA (uridine(2479)-2'-O)-methyltransferase insig. 29 55
  Azospirillum sp. SherDot2 MPMX19_02245 putative tRNA/rRNA methyltransferase YfiF no data 29 73
  Pseudomonas fluorescens FW300-N2E3 AO353_12135 rRNA methylase sig. 31 57
  Pseudomonas fluorescens GW456-L13 PfGW456L13_349 tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) insig. 31 58
  Pseudomonas fluorescens FW300-N2C3 AO356_09750 rRNA methylase insig. 31 58
  Bifidobacterium breve UCC2003 BBR_RS20270 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB no data 29 58
  Bacteroides stercoris CC31F HMPREF1181_RS13700 RNA methyltransferase insig. 29 45
  Azospirillum sp. SherDot2 MPMX19_00824 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB insig. 26 99
  Pseudomonas sp. RS175 PFR28_04942 'tRNA (cytidine(34)-2'-O)-methyltransferase' transl_table=11 insig. 30 58
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3828 tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) strong 30 58
  Pseudomonas fluorescens SBW25 PFLU_RS01675 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 30 57
  Pseudomonas fluorescens SBW25-INTG PFLU_RS01675 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 30 57
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1613 tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) insig. 30 57
  Pseudomonas syringae pv. syringae B728a Psyr_4881 RNA methyltransferase TrmH, group 2 insig. 29 58
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4881 RNA methyltransferase TrmH, group 2 insig. 29 58
  Pseudomonas simiae WCS417 PS417_01625 rRNA methylase no data 29 57
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08470 RNA methyltransferase insig. 22 97
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1266.1 hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-] insig. 29 70
  Klebsiella michiganensis M5al BWI76_RS21385 tRNA/rRNA methyltransferase insig. 25 74
  Serratia liquefaciens MT49 IAI46_24670 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL insig. 33 58
  Caulobacter crescentus NA1000 CCNA_01297 23S rRNA Gm2251 methyltransferase strong 29 58
  Caulobacter crescentus NA1000 Δfur CCNA_01297 23S rRNA Gm2251 methyltransferase cofit 29 58
  Pseudomonas putida KT2440 PP_5052 tRNA(Leu) mC34,mU34 2'-O-ribose methyltransferase, AdoMet-dependent sig. 30 58
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS14840 RNA methyltransferase insig. 28 51
  Phocaeicola dorei CL03T12C01 ABI39_RS18650 RNA methyltransferase insig. 33 35
  Pantoea sp. MT58 IAI47_00750 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL insig. 33 58
  Bacteroides thetaiotaomicron VPI-5482 BT4513 putative rRNA methylase (NCBI ptt file) insig. 32 35
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3218 Predicted rRNA methylase (SpoU class) insig. 29 53
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS18220 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB strong 28 57
  Dickeya dadantii 3937 DDA3937_RS16770 tRNA/rRNA methyltransferase insig. 24 74
  Phocaeicola dorei CL03T12C01 ABI39_RS14495 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB sig. 28 57
  Pseudomonas stutzeri RCH2 Psest_3934 rRNA methylase, putative, group 2 insig. 28 58
  Magnetospirillum magneticum AMB-1 AMB_RS15870 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB no data 27 86
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05230 RNA methyltransferase insig. 32 35
  Dickeya dianthicola ME23 DZA65_RS17915 tRNA/rRNA methyltransferase insig. 24 74
  Vibrio cholerae E7946 ATCC 55056 CSW01_13605 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL cofit 32 58
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2186 rRNA methylase, putative, group 3 sig. 25 58
  Bacteroides ovatus ATCC 8483 BACOVA_05337 RNA methyltransferase, TrmH family insig. 38 23
  Bifidobacterium breve UCC2003 BBR_RS15140 RNA methyltransferase sig. 22 49
  Rhizobium sp. OAE497 ABIE40_RS13160 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 33 43
  Dickeya dianthicola 67-19 HGI48_RS16840 tRNA/rRNA methyltransferase insig. 24 74
  Rahnella sp. WP5 EX31_RS14330 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL insig. 29 58
  Pectobacterium carotovorum WPP14 HER17_RS04445 tRNA/rRNA methyltransferase cofit 24 74
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS09355 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB sig. 27 58
  Variovorax sp. OAS795 ABID97_RS14320 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB sig. 26 72
  Lysobacter sp. OAE881 ABIE51_RS16975 TrmH family RNA methyltransferase insig. 28 68
  Azospirillum brasilense Sp245 AZOBR_RS31345 RNA methyltransferase insig. 25 97
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS08890 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB strong 24 68
  Lysobacter sp. OAE881 ABIE51_RS00285 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 24 58
  Rhodanobacter sp. FW510-T8 OKGIIK_13255 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 27 58
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10645 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL insig. 27 58