Homologs of MIT1002_00573 from Alteromonas macleodii MIT1002

Tyrosine recombinase XerD
SEED: Integron integrase IntI4

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Alteromonas macleodii MIT1002 MIT1002_00573 Tyrosine recombinase XerD insig. 100 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_15405 integron integrase insig. 61 98
o Pseudomonas sp. S08-1 OH686_18870 Integron integrase IntIPac insig. 50 99
o Rhodanobacter denitrificans MT42 LRK55_RS08605 integron integrase insig. 50 96
o Rhodanobacter sp. FW510-T8 OKGIIK_15560 Integrase insig. 49 95
o Methylophilus sp. DMC18 GFF1198 Tyrosine recombinase XerD insig. 45 98
o Shewanella amazonensis SB2B Sama_1355 phage integrase family site specific recombinase (RefSeq) insig. 46 96
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.449.1 Integrase insig. 48 96
o Shewanella oneidensis MR-1 SO2037 site-specific recombinase, phage integrase family (NCBI ptt file) insig. 44 97
o Sphingobium sp. HT1-2 GFF5327 Integron integrase IntI1 insig. 44 97
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS08905 integron integrase cofit 48 85
o Klebsiella pneumoniae MKP103 KDGMDA_00325 class 1 integron integrase IntI1 no data 43 97
o Kangiella aquimarina DSM 16071 B158DRAFT_0342 integron integrase insig. 41 98
  Shewanella amazonensis SB2B Sama_1633 phage integrase family site specific recombinase (RefSeq) insig. 38 85
  Klebsiella pneumoniae MKP103 KDGMDA_19805 integron integrase no data 36 78
o Paraburkholderia sabiae LMG 24235 QEN71_RS42770 site-specific integrase insig. 31 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS39850 site-specific integrase no data 32 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS42300 site-specific integrase no data 32 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS42900 site-specific integrase no data 31 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS44560 site-specific integrase no data 32 98
  Cellulophaga baltica 18 M666_RS13345 site-specific integrase insig. 31 95
  Dinoroseobacter shibae DFL-12 Dshi_3629 integrase family protein (RefSeq) no data 32 99
o Dinoroseobacter shibae DFL-12 Dshi_3661 integrase family protein (RefSeq) no data 32 99
  Paraburkholderia sabiae LMG 24235 QEN71_RS44370 site-specific integrase insig. 33 88
  Alteromonas macleodii MIT1002 MIT1002_04188 integrase/recombinase insig. 39 49
  Phocaeicola dorei CL03T12C01 ABI39_RS16135 site-specific integrase insig. 27 98
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3270 Site-specific recombinase XerD insig. 29 97
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1244 Site-specific recombinase XerD no data 33 99
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1749 Site-specific recombinase XerD no data 33 99
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1789 Site-specific recombinase XerD no data 33 99
o Magnetospirillum magneticum AMB-1 AMB_RS04775 integrase insig. 33 97
  Marinobacter adhaerens HP15 HP15_762 site-specific tyrosine recombinase XerD insig. 34 80
  Castellaniella sp019104865 MT123 ABCV34_RS00515 site-specific tyrosine recombinase XerD strong 29 91
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS08890 site-specific integrase insig. 28 97
  Dinoroseobacter shibae DFL-12 Dshi_3700 integrase family protein (RefSeq) insig. 30 98
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_09695 integrase strong 29 95
  Bacteroides stercoris CC31F HMPREF1181_RS09900 site-specific integrase insig. 27 97
  Azospirillum brasilense Sp245 AZOBR_RS03240 recombinase XerD insig. 32 86
  Azospirillum sp. SherDot2 MPMX19_02643 Tyrosine recombinase XerD no data 32 83
  Kangiella aquimarina DSM 16071 B158DRAFT_2265 tyrosine recombinase XerD strong 29 91
  Cellulophaga baltica 18 M666_RS11310 site-specific tyrosine recombinase XerD sig. 31 78
  Rhodospirillum rubrum S1H Rru_A3738 Phage integrase (NCBI) no data 30 93
  Burkholderia phytofirmans PsJN BPHYT_RS05275 integrase no data 31 99
o Burkholderia phytofirmans PsJN BPHYT_RS32945 integrase no data 31 99
  Pseudomonas sp. RS175 PFR28_00331 Tyrosine recombinase XerD strong 31 92
  Sphingobium sp. HT1-2 GFF2416 Site-specific tyrosine recombinase XerD strong 34 76
  Caulobacter crescentus NA1000 CCNA_03101 site-specific tyrosine recombinase XerD strong 31 92
  Caulobacter crescentus NA1000 Δfur CCNA_03101 site-specific tyrosine recombinase XerD cofit 31 92
  Pseudomonas fluorescens FW300-N2C3 AO356_06385 recombinase XerD strong 30 92
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3145 Tyrosine recombinase XerD no data 30 92
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04729 Tyrosine recombinase XerD cofit 29 92
  Pseudomonas fluorescens FW300-N2E3 AO353_04365 recombinase XerD strong 30 92
  Pseudomonas fluorescens SBW25 PFLU_RS24560 site-specific tyrosine recombinase XerD sig. 30 92
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24560 site-specific tyrosine recombinase XerD strong 30 92
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS10220 site-specific tyrosine recombinase XerD insig. 30 79
  Pseudomonas simiae WCS417 PS417_22895 tyrosine recombinase XerD strong 30 92
  Bifidobacterium breve UCC2003 BBR_RS16755 site-specific tyrosine recombinase XerD strong 29 92
  Pseudomonas sp. DMC3 GFF1987 Tyrosine recombinase XerD insig. 30 92
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1721 Tyrosine recombinase XerD strong 30 92
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3011 Tyrosine recombinase XerD insig. 30 92
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS05140 site-specific tyrosine recombinase XerD insig. 31 68
  Ralstonia solanacearum UW163 UW163_RS08485 site-specific tyrosine recombinase XerD insig. 31 68
  Bacteroides ovatus ATCC 8483 BACOVA_02123 tyrosine recombinase XerD strong 30 77
  Pseudomonas sp. BP01 JOY50_RS11700 xerD site-specific tyrosine recombinase XerD insig. 29 92
  Pseudomonas putida KT2440 PP_1468 Tyrosine recombinase XerD strong 29 92
  Pseudomonas orientalis W4I3 QF045_RS25085 site-specific tyrosine recombinase XerD cofit 29 92
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04705 site-specific tyrosine recombinase XerD strong 31 78
  Rhodopseudomonas palustris CGA009 TX73_002625 site-specific tyrosine recombinase XerD sig. 30 93
  Ralstonia solanacearum GMI1000 RS_RS12755 tyrosine recombinase XerD no data 32 68
  Pseudomonas sp. SVBP6 COO64_RS04910 xerD site-specific tyrosine recombinase XerD sig. 30 92
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1809 tyrosine recombinase XerD insig. 32 80
  Bacteroides thetaiotaomicron VPI-5482 BT2843 integrase (NCBI ptt file) strong 30 77
  Pseudomonas segetis P6 ACVTMO_RS07795 xerD site-specific tyrosine recombinase XerD strong 31 80
  Vibrio cholerae E7946 ATCC 55056 CSW01_12250 site-specific tyrosine recombinase XerD strong 32 82
  Ralstonia solanacearum PSI07 RPSI07_RS12160 site-specific tyrosine recombinase XerD insig. 31 68
  Dickeya dadantii 3937 DDA3937_RS03300 site-specific tyrosine recombinase XerD insig. 32 83
o Paraburkholderia graminis OAS925 ABIE53_001488 site-specific recombinase XerD sig. 31 99
  Dinoroseobacter shibae DFL-12 Dshi_1611 integrase family protein (RefSeq) strong 32 81
  Pseudomonas syringae pv. syringae B728a Psyr_1286 tyrosine recombinase XerD subunit sig. 31 80
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1286 tyrosine recombinase XerD subunit sig. 31 80
  Pseudomonas sp. S08-1 OH686_17750 tyrosine recombinase XerD insig. 32 80
  Magnetospirillum magneticum AMB-1 AMB_RS19880 site-specific tyrosine recombinase XerD cofit 29 97
  Klebsiella pneumoniae MKP103 KDGMDA_04300 site-specific tyrosine recombinase XerD sig. 30 92
  Acinetobacter baumannii LAC-4 RR41_RS17765 site-specific tyrosine recombinase XerD no data 31 85
  Cupriavidus basilensis FW507-4G11 RR42_RS03345 recombinase XerD sig. 31 67
  Phocaeicola dorei CL03T12C01 ABI39_RS07000 site-specific tyrosine recombinase XerD sig. 30 77
  Shewanella loihica PV-4 Shew_0770 tyrosine recombinase XerD (RefSeq) strong 29 90
  Xanthobacter sp. DMC5 GFF3081 Tyrosine recombinase XerD no data 35 67
  Erwinia amylovora T8 OLJFJH_08835 site-specific tyrosine recombinase XerD strong 34 72
  Pseudomonas stutzeri RCH2 Psest_3129 tyrosine recombinase XerD insig. 31 92
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_03195 xerD site-specific tyrosine recombinase XerD no data 30 85
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09680 site-specific tyrosine recombinase XerD strong 30 77
  Klebsiella michiganensis M5al BWI76_RS23815 site-specific tyrosine recombinase XerD no data 33 72
  Desulfovibrio vulgaris Hildenborough JW710 DVU1654 xerD site-specific recombinase, phage integrase family (TIGR) sig. 29 95
  Shewanella oneidensis MR-1 SO2036 site-specific recombinase, phage integrase family (NCBI ptt file) no data 27 97
  Acinetobacter radioresistens SK82 MPMX26_00169 Tyrosine recombinase XerD no data 32 77
  Shewanella sp. ANA-3 Shewana3_3331 tyrosine recombinase XerD (RefSeq) strong 28 83
  Shewanella oneidensis MR-1 SO2528 site-specific recombinase, phage integrase family (NCBI ptt file) no data 27 97
  Serratia liquefaciens MT49 IAI46_20730 site-specific tyrosine recombinase XerD insig. 31 81
  Mycobacterium tuberculosis H37Rv Rv1701 Probable integrase/recombinase sig. 29 95