Homologs of HSERO_RS08735 from Herbaspirillum seropedicae SmR1

hypothetical protein
SEED: Bona fide RidA/YjgF/TdcF/RutC subgroup

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Herbaspirillum seropedicae SmR1 HSERO_RS08735 hypothetical protein insig. 100 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS19100 RidA family protein strong 83 100
o Cupriavidus basilensis FW507-4G11 RR42_RS28840 hypothetical protein insig. 83 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS01965 RidA family protein insig. 85 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01890 reactive intermediate/imine deaminase insig. 84 98
o Burkholderia phytofirmans PsJN BPHYT_RS03130 hypothetical protein insig. 83 98
o Paraburkholderia graminis OAS925 ABIE53_000758 reactive intermediate/imine deaminase strong 83 98
o Ralstonia solanacearum GMI1000 RS_RS22865 RidA family protein no data 76 100
o Ralstonia solanacearum PSI07 RPSI07_RS05465 RidA family protein insig. 77 99
o Sinorhizobium meliloti 1021 SM_b21157 translation initiation inhibitor protein insig. 75 99
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS12635 RidA family protein insig. 82 99
o Rhizobium sp. OAE497 ABIE40_RS21405 RidA family protein insig. 69 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS18170 RidA family protein no data 75 100
o Ralstonia solanacearum UW163 UW163_RS20960 RidA family protein no data 75 100
  Sinorhizobium meliloti 1021 SM_b21139 translation initiation inhibitors insig. 72 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2049 Bona fide RidA/YjgF/TdcF/RutC subgroup no data 66 100
o Pseudomonas fluorescens FW300-N2C3 AO356_00460 reactive intermediate/imine deaminase no data 66 100
o Pseudomonas sp. RS175 PFR28_01387 2-iminobutanoate/2-iminopropanoate deaminase insig. 63 100
o Pseudomonas fluorescens FW300-N2E3 AO353_21730 reactive intermediate/imine deaminase no data 64 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5641 Bona fide RidA/YjgF/TdcF/RutC subgroup no data 63 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2865 Bona fide RidA/YjgF/TdcF/RutC subgroup no data 63 100
o Pseudomonas syringae pv. syringae B728a Psyr_2507 Endoribonuclease L-PSP sig. 62 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2507 Endoribonuclease L-PSP insig. 62 100
o Pseudomonas fluorescens SBW25 PFLU_RS12805 RidA family protein sig. 63 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS12805 RidA family protein sig. 63 100
o Pseudomonas simiae WCS417 PS417_12115 endoribonuclease L-PSP no data 63 100
o Serratia liquefaciens MT49 IAI46_02310 RidA family protein insig. 63 99
o Klebsiella michiganensis M5al BWI76_RS03895 reactive intermediate/imine deaminase insig. 65 99
o Agrobacterium fabrum C58 Atu3926 translation initiation inhibitor insig. 54 88
  Agrobacterium fabrum C58 Atu5232 translation initiation inhibitor no data 49 96
o Variovorax sp. SCN45 GFF6707 RidA/YER057c/UK114 superfamily protein insig. 44 87
o Variovorax sp. OAS795 ABID97_RS22895 RidA family protein insig. 46 87
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17590 RidA family protein sig. 42 84
  Ralstonia solanacearum GMI1000 RS_RS23530 RidA family protein no data 39 99
  Ralstonia solanacearum GMI1000 RS_RS23660 RidA family protein no data 39 99
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1327 endoribonuclease L-PSP, putative sig. 39 84
o Acidovorax sp. GW101-3H11 Ac3H11_699 RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein insig. 44 84
  Cupriavidus basilensis FW507-4G11 RR42_RS34135 hypothetical protein insig. 38 91
o Pseudomonas putida KT2440 PP_2247 putative Endoribonuclease insig. 40 97
o Fusobacterium nucleatum SB010 HUW76_10065 RidA family protein strong 40 84
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4943 Bona fide RidA/YjgF/TdcF/RutC subgroup no data 37 89
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS22825 reactive intermediate/imine deaminase strong 39 83
  Cupriavidus basilensis FW507-4G11 RR42_RS16710 endoribonuclease L-PSP insig. 35 83
o Synechococcus elongatus PCC 7942 Synpcc7942_0972 YjgF-like protein strong 41 83
o Bacteroides stercoris CC31F HMPREF1181_RS10885 RidA family protein strong 36 84
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03549 reactive intermediate/imine deaminase insig. 32 83
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_931 Histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ (TC 3.A.1.3.1) insig. 35 83
o Rhodanobacter sp. FW510-T8 OKGIIK_12095 ridA reactive intermediate/imine deaminase cofit 36 82
o Desulfovibrio vulgaris Hildenborough JW710 DVU2647 endoribonuclease, L-PSP family (TIGR) sig. 33 82
  Paraburkholderia graminis OAS925 ABIE53_004706 2-iminobutanoate/2-iminopropanoate deaminase sig. 32 83
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17245 RidA family protein no data 35 83
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1205.1 hypothetical protein cofit 37 82
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS11845 RidA family protein strong 35 82
o Dinoroseobacter shibae DFL-12 Dshi_0720 Endoribonuclease L-PSP (RefSeq) sig. 36 83
  Cupriavidus basilensis FW507-4G11 RR42_RS30085 hypothetical protein insig. 36 84
o Rhodanobacter denitrificans MT42 LRK55_RS11525 RidA family protein cofit 36 82
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS11800 RidA family protein strong 36 82
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS02020 RidA family protein insig. 35 85
  Shewanella sp. ANA-3 Shewana3_2971 putative endoribonuclease L-PSP (RefSeq) sig. 33 83
o Lysobacter sp. OAE881 ABIE51_RS17260 RidA family protein strong 36 82
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS18400 RidA family protein strong 31 84
o Azospirillum sp. SherDot2 MPMX19_04018 2-aminomuconate deaminase insig. 33 91
  Shewanella oneidensis MR-1 SO1404 endoribonuclease L-PSP, putative (NCBI ptt file) insig. 32 83
o Phocaeicola dorei CL03T12C01 ABI39_RS14715 RidA family protein strong 31 84
  Bacteroides ovatus ATCC 8483 BACOVA_00589 putative endoribonuclease L-PSP cofit 33 84
  Variovorax sp. OAS795 ABID97_RS26145 RidA family protein insig. 34 84
  Paraburkholderia sabiae LMG 24235 QEN71_RS09865 RidA family protein insig. 32 96
  Bacteroides thetaiotaomicron VPI-5482 BT1336 putative translation initiation inhibitor (NCBI ptt file) strong 33 84
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_179 Endoribonuclease L-PSP no data 30 92
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS20925 endoribonuclease L-PSP strong 35 85
  Ralstonia solanacearum UW163 UW163_RS22060 endoribonuclease L-PSP insig. 35 85
  Desulfovibrio vulgaris Hildenborough JW710 DVU2203 endoribonuclease, L-PSP family (TIGR) sig. 28 84
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2329 Endoribonuclease L-PSP insig. 31 83
o Erwinia tracheiphila SCR3 LU632_RS20960 ridA 2-iminobutanoate/2-iminopropanoate deaminase sig. 32 85
o Pantoea sp. MT58 IAI47_16870 2-iminobutanoate/2-iminopropanoate deaminase strong 32 85
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS17820 RidA family protein insig. 35 83
  Ralstonia solanacearum UW163 UW163_RS21320 RidA family protein insig. 35 83
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3622 Bona fide RidA/YjgF/TdcF/RutC subgroup insig. 35 83
o Bifidobacterium breve UCC2003 BBR_RS12070 endoribonuclease L-PSP sig. 33 83
o Pectobacterium carotovorum WPP14 HER17_RS19520 2-iminobutanoate/2-iminopropanoate deaminase sig. 31 85
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19620 2-aminomuconate deaminase sig. 33 84
o Rahnella sp. WP5 EX31_RS12775 2-iminobutanoate/2-iminopropanoate deaminase insig. 32 85
o Enterobacter sp. TBS_079 MPMX20_00542 2-iminobutanoate/2-iminopropanoate deaminase sig. 31 85
  Serratia liquefaciens MT49 IAI46_09040 pyrimidine utilization protein C insig. 31 88
  Ralstonia solanacearum PSI07 RPSI07_RS05740 RidA family protein sig. 34 83
  Agrobacterium fabrum C58 Atu2498 hypothetical protein strong 32 88
  Alteromonas macleodii MIT1002 MIT1002_03466 Putative aminoacrylate peracid reductase RutC insig. 32 89
  Burkholderia phytofirmans PsJN BPHYT_RS34350 endoribonuclease L-PSP insig. 32 83
o Enterobacter asburiae PDN3 EX28DRAFT_3444 reactive intermediate/imine deaminase insig. 29 85
  Paraburkholderia sabiae LMG 24235 QEN71_RS41190 RidA family protein no data 33 82
  Azospirillum brasilense Sp245 AZOBR_RS32435 dfrA insig. 33 82
  Kangiella aquimarina DSM 16071 B158DRAFT_0030 Putative translation initiation inhibitor, yjgF family insig. 32 84
  Caulobacter crescentus NA1000 CCNA_02886 RutC-family pyrimidine utilization protein C sig. 32 80
  Caulobacter crescentus NA1000 Δfur CCNA_02886 RutC-family pyrimidine utilization protein C cofit 32 80
  Ralstonia solanacearum GMI1000 RS_RS23155 RidA family protein insig. 33 83
  Klebsiella michiganensis M5al BWI76_RS10770 pyrimidine utilization protein C sig. 30 89
o Dickeya dadantii 3937 DDA3937_RS01915 2-iminobutanoate/2-iminopropanoate deaminase insig. 28 84
o Escherichia coli BL21 ECD_02980 putative reactive intermediate deaminase insig. 29 84
o Escherichia fergusonii Becca EFB2_00701 Putative reactive intermediate deaminase TdcF insig. 29 84
o Escherichia coli ECOR27 NOLOHH_10200 tdcF enamine/imine deaminase insig. 29 84