| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS03490 | | response regulator transcription factor | insig. | 100 | 100 |
| o | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08505 | | AraC family transcriptional regulator | insig. | 56 | 100 |
| o | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_4180 | | AraC-type DNA-binding domain-containing proteins | insig. | 55 | 99 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS08805 | | helix-turn-helix domain-containing protein | insig. | 52 | 100 |
| o | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS00425 | | AraC family transcriptional regulator | insig. | 54 | 99 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT0729 | | transcriptional regulator (NCBI ptt file) | insig. | 52 | 100 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_00810 | | transcriptional regulator, AraC family | insig. | 51 | 99 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS05480 | | helix-turn-helix domain-containing protein | insig. | 48 | 99 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS13130 | | helix-turn-helix domain-containing protein | insig. | 48 | 99 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1123 | | transcriptional regulator (NCBI ptt file) | insig. | 48 | 99 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS08290 | | helix-turn-helix domain-containing protein | insig. | 48 | 99 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02433 | | transcriptional regulator, AraC family | insig. | 52 | 100 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS03520 | | AraC family transcriptional regulator | insig. | 49 | 100 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS11110 | | AraC family transcriptional regulator | insig. | 49 | 100 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS15540 | | helix-turn-helix transcriptional regulator | insig. | 49 | 100 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS01525 | | helix-turn-helix transcriptional regulator | insig. | 49 | 100 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1396 | | transcription regulator, AraC family (NCBI ptt file) | sig. | 47 | 99 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02432 | | transcriptional regulator, AraC family | strong | 46 | 100 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS03800 | | helix-turn-helix domain-containing protein | insig. | 45 | 99 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT0728 | | transcriptional regulator (NCBI ptt file) | cofit | 43 | 100 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS07620 | | AraC family transcriptional regulator | insig. | 44 | 98 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08540 | | AraC family transcriptional regulator | insig. | 43 | 100 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS11115 | | AraC family transcriptional regulator | cofit | 42 | 99 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS01520 | | helix-turn-helix transcriptional regulator | strong | 39 | 98 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS15545 | | AraC family transcriptional regulator | insig. | 39 | 98 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09785 | | AraC family transcriptional regulator | cofit | 38 | 97 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09755 | | AraC family transcriptional regulator | insig. | 39 | 97 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS04505 | | AraC family transcriptional regulator | insig. | 37 | 94 |
| | Cellulophaga baltica 18 | M666_RS13320 | | AraC family transcriptional regulator | insig. | 34 | 98 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS03515 | | response regulator transcription factor | insig. | 36 | 85 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS05525 | | AraC family transcriptional regulator | insig. | 35 | 96 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS24510 | | AraC family transcriptional regulator | insig. | 35 | 84 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS03495 | | hypothetical protein | insig. | 32 | 58 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1385 | | transcriptional regulator (NCBI ptt file) | sig. | 29 | 74 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS11415 | | AraC family transcriptional regulator | sig. | 23 | 84 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS21715 | | AraC family transcriptional regulator | insig. | 26 | 74 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_03710 | | AraC family transcriptional regulator | insig. | 26 | 78 |
| | Pseudomonas sp. SVBP6 | COO64_RS23480 | | response regulator transcription factor | insig. | 39 | 26 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS02045 | | AraC family transcriptional regulator | insig. | 25 | 81 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS02740 | | AraC family transcriptional regulator | insig. | 25 | 81 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_18840 | | AraC family transcriptional regulator | sig. | 26 | 76 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS21220 | | AraC family transcriptional regulator | insig. | 40 | 27 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS16635 | | AraC family transcriptional regulator | insig. | 25 | 75 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS07320 | | AraC family transcriptional regulator | strong | 40 | 27 |
| | Pseudomonas sp. S08-1 | OH686_02580 | | hypothetical protein | insig. | 38 | 26 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS04760 | | AraC family transcriptional regulator | insig. | 21 | 97 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_03237 | | transcriptional regulator, AraC family | insig. | 40 | 27 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2120 | | transcriptional regulator (NCBI ptt file) | insig. | 37 | 27 |
| | Enterobacter sp. TBS_079 | MPMX20_00635 | | HTH-type transcriptional activator RhaR | insig. | 33 | 28 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3540 | | 4-hydroxyphenylacetate catabolism regulatory protein HpaA | insig. | 33 | 28 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_03675 | | hypothetical protein | sig. | 24 | 78 |
| | Pseudomonas aeruginosa PUPa3 | NPBIFN_01788 | | HTH araC/xylS-type domain-containing protein | insig. | 37 | 29 |
| | Pseudomonas aeruginosa MRSN321 | PFGADD_01752 | | HTH araC/xylS-type domain-containing protein | insig. | 37 | 29 |
| | Escherichia coli BL21 | ECD_04223 | | HpaA | insig. | 31 | 28 |
| | Escherichia coli ECOR27 | NOLOHH_03750 | hpaA | 4-hydroxyphenylacetate catabolism regulatory protein HpaA | insig. | 31 | 28 |
| | Escherichia coli ECRC62 | BNILDI_07850 | hpaA | 4-hydroxyphenylacetate catabolism regulatory protein HpaA | insig. | 31 | 28 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03717 | | HTH-type transcriptional activator RhaR | insig. | 31 | 28 |
| | Pseudomonas sp. RS175 | PFR28_01504 | | HTH-type transcriptional activator RhaR | insig. | 33 | 33 |
| | Pseudomonas protegens RBAN4 | FABNJH_26025 | pobR | Transcriptional regulator PobR | insig. | 28 | 55 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_506 | | Transcriptional regulator, AraC family | insig. | 38 | 26 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_12085 | | 4-hydroxyphenylacetate catabolism regulatory protein HpaA | insig. | 34 | 28 |
| | Klebsiella pneumoniae MRSN742743 | GJGHJB_04359 | hpaA | 4-hydroxyphenylacetate catabolism regulatory protein HpaA | insig. | 34 | 28 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS15945 | | helix-turn-helix domain-containing protein | insig. | 28 | 37 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_16340 | | AraC family transcriptional regulator | insig. | 29 | 43 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4154 | | Transcriptional regulator, AraC family | insig. | 29 | 46 |
| | Dinoroseobacter shibae DFL-12 | Dshi_4172 | | transcriptional regulator, AraC family (RefSeq) | no data | 27 | 38 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS14630 | | AraC family transcriptional regulator | sig. | 34 | 27 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT3667 | | transcriptional regulator (NCBI ptt file) | insig. | 42 | 24 |
| | Rahnella sp. WP5 | EX31_RS02060 | | AraC family transcriptional regulator | insig. | 39 | 27 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_01620 | | AraC family transcriptional regulator | insig. | 36 | 26 |
| | Pseudomonas stutzeri RCH2 | Psest_2061 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 32 | 27 |
| | Rahnella sp. WP5 | EX31_RS17960 | | AraC family transcriptional regulator | insig. | 27 | 56 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_2811 | | ABC-type sugar transport system, periplasmic component | strong | 31 | 36 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_3534 | | AraC-type DNA-binding domain-containing proteins | insig. | 23 | 68 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS13170 | | helix-turn-helix domain-containing protein | insig. | 35 | 28 |
| | Pseudomonas sp. RS175 | PFR28_03054 | | HTH-type transcriptional activator RhaS | cofit | 35 | 26 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS09905 | | AraC family transcriptional regulator | insig. | 29 | 37 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_03540 | | AraC family transcriptional regulator | insig. | 21 | 89 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS01165 | | helix-turn-helix transcriptional regulator | insig. | 38 | 25 |
| | Sphingobium sp. HT1-2 | GFF460 | | Transcriptional regulator, AraC family | cofit | 34 | 27 |
| | Klebsiella michiganensis M5al | BWI76_RS03835 | | 4-hydroxyphenylacetate catabolism regulatory protein HpaA | insig. | 31 | 28 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_13545 | | AraC family transcriptional regulator | sig. | 33 | 28 |
| | Pseudomonas aeruginosa PUPa3 | NPBIFN_02361 | | Transcriptional regulator | insig. | 33 | 28 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS07105 | | helix-turn-helix domain-containing protein | insig. | 30 | 44 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_01387 | | transcriptional regulator, AraC family | insig. | 23 | 77 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS13450 | | AraC family transcriptional regulator | insig. | 22 | 75 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_3419 | | Transcriptional regulator PobR, AraC family | insig. | 38 | 27 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS18520 | | AraC family transcriptional regulator | cofit | 32 | 47 |
| | Rhizobium sp. OAE497 | ABIE40_RS19570 | | helix-turn-helix domain-containing protein | strong | 26 | 44 |
| | Pseudomonas aeruginosa MRSN321 | PFGADD_02322 | | Transcriptional regulator | insig. | 33 | 28 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3285 | | Transcriptional activator of 4-hydroxyphenylacetate 3-monooxygenase operon, XylS/AraC family | insig. | 29 | 27 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1235 | | AraC-type transcription regulator (NCBI ptt file) | sig. | 24 | 75 |
| | Pseudomonas stutzeri RCH2 | Psest_2631 | | AraC-type DNA-binding domain-containing proteins | sig. | 36 | 24 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_26250 | | AraC family transcriptional regulator | insig. | 34 | 26 |
| | Cellulophaga baltica 18 | M666_RS13230 | | AraC family transcriptional regulator | insig. | 24 | 80 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS12365 | | AraC family transcriptional regulator | insig. | 32 | 35 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS10015 | | AraC family transcriptional regulator | insig. | 37 | 28 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1125 | | Transcriptional regulator, AraC family | insig. | 32 | 26 |
| | Sinorhizobium meliloti 1021 | SMa0319 | | AraC family transcriptional regulator | insig. | 24 | 60 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS21020 | | helix-turn-helix transcriptional regulator | insig. | 34 | 27 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS07130 | | helix-turn-helix transcriptional regulator | strong | 34 | 27 |
| | Paraburkholderia graminis OAS925 | ABIE53_002253 | | AraC family transcriptional regulator | insig. | 29 | 28 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5905 | | Transcriptional regulator of various polyols utilization, AraC family | insig. | 34 | 26 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1090 | | AraC-type transcription regulator (NCBI ptt file) | sig. | 38 | 26 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS00045 | | hypothetical protein | insig. | 40 | 28 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_19930 | | AraC family transcriptional regulator | insig. | 34 | 26 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS01545 | | helix-turn-helix domain-containing protein | strong | 29 | 33 |
| | Pantoea sp. MT58 | IAI47_05640 | | helix-turn-helix transcriptional regulator | insig. | 27 | 27 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS00290 | | helix-turn-helix transcriptional regulator | insig. | 36 | 25 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2062 | | Transcriptional regulator, AraC family | insig. | 34 | 25 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS25180 | | AraC family transcriptional regulator | insig. | 28 | 32 |
| | Dickeya dadantii 3937 | DDA3937_RS08700 | | helix-turn-helix domain-containing protein | insig. | 25 | 47 |
| | Variovorax sp. SCN45 | GFF4963 | | Transcriptional regulator, AraC family | insig. | 35 | 28 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS03835 | | AraC family transcriptional regulator | insig. | 31 | 28 |
| | Rhodopseudomonas palustris CGA009 | TX73_006775 | | AraC family transcriptional regulator | insig. | 31 | 33 |
| | Sinorhizobium meliloti 1021 | SM_b21419 | | AraC family transcriptional regulator | insig. | 33 | 27 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS03815 | | AraC family transcriptional regulator | insig. | 32 | 37 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS07260 | | helix-turn-helix transcriptional regulator | insig. | 31 | 37 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS09140 | | AraC family transcriptional regulator | insig. | 38 | 27 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS05430 | | response regulator | insig. | 32 | 27 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1474 | | Melibiose operon regulatory protein | insig. | 32 | 28 |
| | Pseudomonas sp. S08-1 | OH686_11870 | | Transcriptional regulator, AraC family | insig. | 40 | 28 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS04225 | | helix-turn-helix transcriptional regulator | sig. | 33 | 27 |
| | Enterobacter sp. TBS_079 | MPMX20_02552 | | HTH-type transcriptional activator RhaR | insig. | 31 | 28 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS00365 | | helix-turn-helix domain-containing protein | insig. | 36 | 27 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS07135 | | response regulator | insig. | 32 | 26 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2226 | | transcriptional regulator (NCBI ptt file) | insig. | 32 | 27 |
| | Escherichia coli BL21 | ECD_03989 | | melibiose operon transcriptional regulator; autoregulator | insig. | 32 | 28 |
| | Escherichia fergusonii Becca | EFB2_04464 | | Melibiose operon regulatory protein | insig. | 32 | 28 |
| | Escherichia coli ECOR27 | NOLOHH_04810 | melR | transcriptional regulator MelR | insig. | 32 | 28 |
| | Escherichia coli ECOR38 | HEPCGN_11180 | melR | transcriptional regulator MelR | insig. | 32 | 28 |
| | Escherichia coli ECRC100 | OKFHMN_12545 | melR | transcriptional regulator MelR | cofit | 32 | 28 |
| | Escherichia coli ECRC101 | MCAODC_03055 | melR | transcriptional regulator MelR | insig. | 32 | 28 |
| | Escherichia coli ECRC102 | NIAGMN_10390 | melR | transcriptional regulator MelR | cofit | 32 | 28 |
| | Escherichia coli ECRC62 | BNILDI_06680 | melR | transcriptional regulator MelR | cofit | 32 | 28 |
| | Escherichia coli ECRC98 | JDDGAC_16180 | melR | transcriptional regulator MelR | insig. | 32 | 28 |
| | Escherichia coli ECRC99 | KEDOAH_15620 | melR | transcriptional regulator MelR | no data | 32 | 28 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03926 | | Melibiose operon regulatory protein | insig. | 32 | 28 |
| | Escherichia coli BW25113 | b4118 | melR | DNA-binding transcriptional dual regulator (NCBI) | insig. | 32 | 28 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS19910 | | AraC family transcriptional regulator | insig. | 32 | 36 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS23830 | | transcriptional regulator MelR | insig. | 32 | 28 |
| | Paraburkholderia graminis OAS925 | ABIE53_005062 | | AraC family transcriptional regulator | sig. | 30 | 27 |
| | Pseudomonas sp. DMC3 | GFF1052 | | HTH-type transcriptional activator RhaR | cofit | 32 | 27 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.1401.1 | | hypothetical protein | sig. | 30 | 33 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS12720 | | AraC family transcriptional regulator | insig. | 25 | 37 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS12720 | | AraC family transcriptional regulator | insig. | 25 | 37 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3872 | | Transcriptional regulator, AraC family | strong | 40 | 28 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS06080 | | response regulator transcription factor | insig. | 31 | 28 |
| | Acinetobacter radioresistens SK82 | MPMX26_02295 | | putative HTH-type transcriptional regulator | no data | 34 | 29 |
| | Rhodopseudomonas palustris CGA009 | TX73_005185 | | helix-turn-helix domain-containing protein | cofit | 36 | 28 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS09555 | | AraC family transcriptional regulator | insig. | 36 | 28 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_14570 | araC | AraC family transcriptional regulator | insig. | 36 | 28 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS06780 | | hybrid sensor histidine kinase/response regulator | insig. | 33 | 27 |
| | Agrobacterium fabrum C58 | Atu0410 | | transcriptional regulator, AraC family | insig. | 30 | 26 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4948 | | Transcriptional regulator, AraC family | sig. | 30 | 27 |
| | Bosea sp. OAE506 | ABIE41_RS16450 | | AraC family transcriptional regulator | insig. | 29 | 27 |
| | Pseudomonas segetis P6 | ACVTMO_RS13590 | | helix-turn-helix domain-containing protein | insig. | 28 | 36 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_10555 | | AraC family transcriptional regulator | insig. | 25 | 77 |
| | Sinorhizobium meliloti 1021 | SMa2133 | | hypothetical protein | insig. | 23 | 53 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_03607 | | putative flagellar protein FliS | insig. | 41 | 21 |
| | Dickeya dadantii 3937 | DDA3937_RS05590 | | AraC family transcriptional regulator | insig. | 38 | 24 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS09215 | | AraC family transcriptional regulator | insig. | 36 | 28 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS12385 | | AraC family transcriptional regulator | insig. | 35 | 28 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT0995 | | transcription regulator, AraC-type (NCBI ptt file) | insig. | 34 | 27 |
| | Pseudomonas sp. BP01 | JOY50_RS27840 | | AraC family transcriptional regulator | insig. | 31 | 26 |
| | Pseudomonas orientalis W4I3 | QF045_RS24340 | | AraC family transcriptional regulator | insig. | 29 | 34 |
| | Azospirillum sp. SherDot2 | MPMX19_02871 | | HTH-type transcriptional activator RhaR | insig. | 28 | 29 |
| | Azospirillum brasilense Sp245 | AZOBR_RS28145 | | putative transcriptional regulator AraC/XylS family | insig. | 28 | 37 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS04015 | | AraC family transcriptional regulator | insig. | 26 | 43 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1968 | | transcriptional regulator (NCBI ptt file) | sig. | 21 | 87 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT4182 | | two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) | insig. | 39 | 26 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3542 | | Transcriptional regulator, AraC family | insig. | 34 | 29 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_2613 | | AraC-type DNA-binding domain-containing proteins | insig. | 34 | 31 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS19905 | | AraC family transcriptional regulator | insig. | 31 | 26 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5308 | | Transcriptional regulator, AraC family | strong | 31 | 27 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_10695 | | transcriptional regulator MelR | insig. | 31 | 28 |
| | Klebsiella pneumoniae MRSN742743 | GJGHJB_04635 | melR | transcriptional regulator MelR | insig. | 31 | 28 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1041 | | transcriptional regulator, AraC family | insig. | 30 | 24 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1041 | | transcriptional regulator, AraC family | insig. | 30 | 24 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09165 | | AraC family transcriptional regulator | insig. | 28 | 27 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS16105 | | helix-turn-helix domain-containing protein | cofit | 27 | 38 |
| | Sinorhizobium meliloti 1021 | SMa1749 | | transcriptional regulator | insig. | 26 | 54 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS09650 | | AraC family transcriptional regulator | strong | 24 | 59 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS39060 | | helix-turn-helix domain-containing protein | insig. | 24 | 55 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS11905 | | helix-turn-helix domain-containing protein | insig. | 23 | 38 |
| | Cellulophaga baltica 18 | M666_RS14335 | | helix-turn-helix domain-containing protein | insig. | 22 | 77 |
| | Cellulophaga baltica 18 | M666_RS16180 | | helix-turn-helix domain-containing protein | insig. | 22 | 67 |
| | Klebsiella michiganensis M5al | BWI76_RS08435 | | AraC family transcriptional regulator | insig. | 34 | 29 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS16625 | | AraC family transcriptional regulator | insig. | 33 | 28 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_04931 | | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein | cofit | 33 | 27 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4851 | | Transcriptional regulator of various polyols utilization, AraC family | sig. | 32 | 26 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2560 | | transcriptional regulator, AraC family (RefSeq) | insig. | 31 | 27 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_19245 | | AraC family transcriptional regulator | insig. | 31 | 47 |
| | Cellulophaga baltica 18 | M666_RS04065 | | helix-turn-helix domain-containing protein | insig. | 28 | 43 |
| | Enterobacter sp. TBS_079 | MPMX20_02241 | | HTH-type transcriptional activator RhaS | sig. | 27 | 27 |
| | Rhizobium sp. OAE497 | ABIE40_RS12260 | | AraC family transcriptional regulator | insig. | 27 | 56 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS13685 | | AraC family transcriptional regulator | insig. | 25 | 58 |
| | Rhodopseudomonas palustris CGA009 | TX73_005540 | | AraC family transcriptional regulator | insig. | 24 | 51 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02999 | | transcriptional regulator, AraC family | insig. | 32 | 26 |
| | Pseudomonas aeruginosa PUPa3 | NPBIFN_01215 | | HTH araC/xylS-type domain-containing protein | insig. | 37 | 28 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS25880 | | DNA-binding transcriptional regulator | strong | 34 | 26 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT4124 | | two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) | insig. | 33 | 28 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS06070 | | helix-turn-helix domain-containing protein | insig. | 33 | 27 |
| | Pseudomonas aeruginosa MRSN321 | PFGADD_01197 | | HTH araC/xylS-type domain-containing protein | insig. | 31 | 47 |
| | Variovorax sp. SCN45 | GFF1929 | | Transcriptional regulator, AraC family | insig. | 31 | 24 |
| | Paraburkholderia graminis OAS925 | ABIE53_001115 | | AraC family transcriptional activator of pobA | insig. | 29 | 35 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_00710 | | transcriptional regulator, AraC family | insig. | 33 | 28 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS14000 | | helix-turn-helix domain-containing protein | cofit | 24 | 59 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS18340 | | helix-turn-helix domain-containing protein | insig. | 21 | 46 |
| | Cellulophaga baltica 18 | M666_RS02185 | | two-component regulator propeller domain-containing protein | insig. | 36 | 27 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS01750 | | AraC family transcriptional regulator | insig. | 35 | 26 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS12850 | | helix-turn-helix domain-containing protein | insig. | 33 | 25 |
| | Pseudomonas sp. DMC3 | GFF2389 | | hypothetical protein | cofit | 33 | 28 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS23835 | | AraC family transcriptional regulator | insig. | 33 | 29 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS23835 | | AraC family transcriptional regulator | insig. | 33 | 29 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS06745 | | 4-hydroxyphenylacetate catabolism regulatory protein HpaA | insig. | 30 | 28 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS29955 | | AraC family transcriptional regulator | insig. | 29 | 28 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c02800 | | putative transcriptional regulator, AraC family | strong | 29 | 35 |
| | Pseudomonas protegens RBAN4 | FABNJH_16670 | mltR | Transcriptional activator MltR | insig. | 32 | 26 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02065 | | response regulator receiver domain protein | insig. | 31 | 27 |
| | Pseudomonas stutzeri RCH2 | Psest_0067 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 40 | 21 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS12225 | | AraC family transcriptional regulator | insig. | 38 | 24 |
| | Variovorax sp. OAS795 | ABID97_RS20685 | | AraC family transcriptional regulator | insig. | 33 | 24 |
| | Pseudomonas sp. RS175 | PFR28_00797 | | putative HTH-type transcriptional regulator | insig. | 33 | 29 |
| | Pseudomonas simiae WCS417 | PS417_22210 | | AraC family transcriptional regulator | insig. | 33 | 29 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS08545 | | response regulator | insig. | 32 | 25 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS16970 | | GlxA family transcriptional regulator | insig. | 30 | 27 |
| | Rahnella sp. WP5 | EX31_RS10900 | | helix-turn-helix domain-containing protein | insig. | 29 | 27 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_18475 | | AraC family transcriptional regulator | insig. | 29 | 34 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04577 | | putative HTH-type transcriptional regulator | cofit | 28 | 34 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_05520 | | AraC family transcriptional regulator | insig. | 26 | 57 |
| | Pseudomonas protegens RBAN4 | FABNJH_08255 | araC | AraC family transcriptional regulator | insig. | 28 | 34 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02694 | | response regulator receiver domain protein | insig. | 39 | 26 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04027 | | RCS-specific HTH-type transcriptional activator RclR | cofit | 35 | 27 |
| | Agrobacterium fabrum C58 | Atu4644 | | AraC family transcriptional regulator | insig. | 34 | 26 |
| | Rhodopseudomonas palustris CGA009 | TX73_006805 | | AraC family transcriptional regulator | insig. | 33 | 25 |
| | Azospirillum sp. SherDot2 | MPMX19_05306 | | RCS-specific HTH-type transcriptional activator RclR | insig. | 33 | 27 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_04000 | | AraC family transcriptional regulator | insig. | 33 | 29 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2635 | | Transcriptional regulator, AraC family | insig. | 33 | 29 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS13410 | | AraC family transcriptional regulator | strong | 30 | 26 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS13410 | | AraC family transcriptional regulator | strong | 30 | 26 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02793 | | HTH-type transcriptional activator RhaS | cofit | 30 | 26 |
| | Pseudomonas orientalis W4I3 | QF045_RS17170 | | AraC family transcriptional regulator | insig. | 30 | 26 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1211 | | Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain | strong | 29 | 47 |
| | Xanthobacter sp. DMC5 | GFF4033 | | HTH-type transcriptional activator RhaS | insig. | 27 | 28 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01105 | | transcriptional regulator, AraC family | insig. | 26 | 28 |
| | Pseudomonas sp. SVBP6 | COO64_RS26250 | | helix-turn-helix domain-containing protein | insig. | 25 | 43 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS26630 | | AraC family transcriptional regulator | insig. | 33 | 28 |
| | Sphingobium sp. HT1-2 | GFF4911 | | Transcriptional regulator, AraC family | cofit | 31 | 28 |
| | Klebsiella pneumoniae MRSN742743 | GJGHJB_04926 | rhaS | HTH-type transcriptional activator RhaS | insig. | 26 | 54 |